RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 DMXL2Q8TDJ6 3036 aa9.13□□□□□ -0.95
BRAT1-206ENST00000493232 LRBAP50851 2863 aa9.13□□□□□ -0.95
BRAT1-206ENST00000493232 COL12A1Q99715 3063 aa9.12□□□□□ -0.95
BRAT1-206ENST00000493232 SPTBN5Q9NRC6 3674 aaKnown RBP9.11□□□□□ -0.95
BRAT1-206ENST00000493232 FREM2Q5SZK8 3169 aa9.1□□□□□ -0.95
BRAT1-206ENST00000493232 REV3LO60673 3130 aa9.08□□□□□ -0.96
BRAT1-206ENST00000493232 TACC2O95359 2948 aa9.07□□□□□ -0.96
BRAT1-206ENST00000493232 C20orf166-AS1Q96NR2 134 aa9.07□□□□□ -0.96
BRAT1-206ENST00000493232 A8MU10 97 aa9.06□□□□□ -0.96
BRAT1-206ENST00000493232 KMT2BQ9UMN6 2715 aaPredicted RBP9.05□□□□□ -0.96
BRAT1-206ENST00000493232 UTP20O75691 2785 aaKnown RBP9.05□□□□□ -0.96
BRAT1-206ENST00000493232 KRTAP25-1Q3LHN0 102 aa9.04□□□□□ -0.96
BRAT1-206ENST00000493232 SPEGQ15772 3267 aa9.02□□□□□ -0.97
BRAT1-206ENST00000493232 A6NN06 94 aa9.02□□□□□ -0.97
BRAT1-206ENST00000493232 APCP25054 2843 aa9□□□□□ -0.97
BRAT1-206ENST00000493232 EYSQ5T1H1 3165 aa8.97□□□□□ -0.97
BRAT1-206ENST00000493232 TENM4Q6N022 2769 aa8.94□□□□□ -0.98
BRAT1-206ENST00000493232 TNP1P09430 55 aa8.92□□□□□ -0.98
BRAT1-206ENST00000493232 DMXL1Q9Y485 3027 aa8.91□□□□□ -0.98
BRAT1-206ENST00000493232 ZZEF1O43149 2961 aa8.91□□□□□ -0.98
BRAT1-206ENST00000493232 NIPBLQ6KC79 2804 aaeCLIP8.86□□□□□ -0.99
BRAT1-206ENST00000493232 USP34Q70CQ2 3546 aa8.85□□□□□ -0.99
BRAT1-206ENST00000493232 KRTAP16-1A8MUX0 517 aa8.85□□□□□ -0.99
BRAT1-206ENST00000493232 HRNRQ86YZ3 2850 aaPredicted RBP8.84□□□□□ -0.99
BRAT1-206ENST00000493232 ZANQ9Y493 2812 aa8.82□□□□□ -1
BRAT1-206ENST00000493232 LOC400499M0QZD8 3231 aa8.82□□□□□ -1
BRAT1-206ENST00000493232 CFAP47Q6ZTR5 3102 aa8.81□□□□□ -1
BRAT1-206ENST00000493232 ASH1LQ9NR48 2969 aaKnown RBP8.77□□□□□ -1.01
BRAT1-206ENST00000493232 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
BRAT1-206ENST00000493232 XP32Q5T750 250 aa8.75□□□□□ -1.01
BRAT1-206ENST00000493232 CRYBG3Q68DQ2 2970 aa8.73□□□□□ -1.01
BRAT1-206ENST00000493232 MYO15AQ9UKN7 3530 aa8.71□□□□□ -1.02
BRAT1-206ENST00000493232 PP632Q6XCG6 107 aa8.7□□□□□ -1.02
BRAT1-206ENST00000493232 CELSR2Q9HCU4 2923 aa8.68□□□□□ -1.02
BRAT1-206ENST00000493232 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
BRAT1-206ENST00000493232 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.02
BRAT1-206ENST00000493232 TPRXLQ17RH7 258 aa8.64□□□□□ -1.03
BRAT1-206ENST00000493232 DCHS2Q6V1P9 2916 aa8.62□□□□□ -1.03
BRAT1-206ENST00000493232 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
BRAT1-206ENST00000493232 FBN2P35556 2912 aa8.57□□□□□ -1.04
BRAT1-206ENST00000493232 NF1P21359 2839 aa8.56□□□□□ -1.04
BRAT1-206ENST00000493232 A0A1B0GVY2 172 aa8.53□□□□□ -1.04
BRAT1-206ENST00000493232 H0YAA0 97 aa8.46□□□□□ -1.05
BRAT1-206ENST00000493232 KRTAP13-3Q3SY46 172 aa8.45□□□□□ -1.06
BRAT1-206ENST00000493232 MXRA5Q9NR99 2828 aa8.45□□□□□ -1.06
BRAT1-206ENST00000493232 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
BRAT1-206ENST00000493232 PRO2289Q9P1D8 64 aa8.43□□□□□ -1.06
BRAT1-206ENST00000493232 RELNP78509 3460 aa8.4□□□□□ -1.07
BRAT1-206ENST00000493232 P0C880 135 aa8.38□□□□□ -1.07
BRAT1-206ENST00000493232 WDFY3Q8IZQ1 3526 aa8.38□□□□□ -1.07
BRAT1-206ENST00000493232 TENM1Q9UKZ4 2725 aa8.29□□□□□ -1.08
BRAT1-206ENST00000493232 TENM3Q9P273 2699 aa8.27□□□□□ -1.09
BRAT1-206ENST00000493232 LAMA5O15230 3695 aa8.26□□□□□ -1.09
BRAT1-206ENST00000493232 TENM2Q9NT68 2774 aa8.25□□□□□ -1.09
BRAT1-206ENST00000493232 ZFHX4Q86UP3 3567 aa8.24□□□□□ -1.09
BRAT1-206ENST00000493232 DCHS1Q96JQ0 3298 aa8.21□□□□□ -1.1
BRAT1-206ENST00000493232 ASPMQ8IZT6 3477 aa8.2□□□□□ -1.1
BRAT1-206ENST00000493232 PDZD2O15018 2839 aa8.2□□□□□ -1.1
BRAT1-206ENST00000493232 DMDP11532 3685 aa8.2□□□□□ -1.1
BRAT1-206ENST00000493232 CELSR1Q9NYQ6 3014 aa8.2□□□□□ -1.1
BRAT1-206ENST00000493232 MUC3AQ02505 3323 aa8.16□□□□□ -1.1
BRAT1-206ENST00000493232 PKD1L1Q8TDX9 2849 aa8.07□□□□□ -1.12
BRAT1-206ENST00000493232 OTOGQ6ZRI0 2925 aa8.05□□□□□ -1.12
BRAT1-206ENST00000493232 SMG1Q96Q15 3661 aaKnown RBP8.04□□□□□ -1.12
BRAT1-206ENST00000493232 CSMD1Q96PZ7 3565 aa8.02□□□□□ -1.13
BRAT1-206ENST00000493232 TGP01266 2768 aa7.98□□□□□ -1.13
BRAT1-206ENST00000493232 KRTAP12-2P59991 146 aa7.96□□□□□ -1.14
BRAT1-206ENST00000493232 KRTAP13-4Q3LI77 160 aa7.95□□□□□ -1.14
BRAT1-206ENST00000493232 VWFP04275 2813 aa7.92□□□□□ -1.14
BRAT1-206ENST00000493232 FBN1P35555 2871 aaKnown RBP7.86□□□□□ -1.15
BRAT1-206ENST00000493232 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
BRAT1-206ENST00000493232 NBPF19A0A087WUL8 3843 aa7.85□□□□□ -1.15
BRAT1-206ENST00000493232 SVEP1Q4LDE5 3571 aa7.81□□□□□ -1.16
BRAT1-206ENST00000493232 KRTAP3-1Q9BYR8 98 aa7.78□□□□□ -1.16
BRAT1-206ENST00000493232 ANK3Q12955 4377 aaKnown RBP7.76□□□□□ -1.17
BRAT1-206ENST00000493232 SPENQ96T58 3664 aaKnown RBP7.74□□□□□ -1.17
BRAT1-206ENST00000493232 ZFHX3Q15911 3703 aa7.73□□□□□ -1.17
BRAT1-206ENST00000493232 BSNQ9UPA5 3926 aa7.67□□□□□ -1.18
BRAT1-206ENST00000493232 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
BRAT1-206ENST00000493232 CSMD2Q7Z408 3487 aa7.62□□□□□ -1.19
BRAT1-206ENST00000493232 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
BRAT1-206ENST00000493232 CUBNO60494 3623 aa7.53□□□□□ -1.2
BRAT1-206ENST00000493232 SRRM2Q9UQ35 2752 aaKnown RBP7.52□□□□□ -1.21
BRAT1-206ENST00000493232 TRRAPQ9Y4A5 3859 aa7.51□□□□□ -1.21
BRAT1-206ENST00000493232 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
BRAT1-206ENST00000493232 FBN3Q75N90 2809 aa7.46□□□□□ -1.21
BRAT1-206ENST00000493232 MEGF8Q7Z7M0 2845 aa7.38□□□□□ -1.23
BRAT1-206ENST00000493232 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
BRAT1-206ENST00000493232 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
BRAT1-206ENST00000493232 VPS13CQ709C8 3753 aa7.27□□□□□ -1.25
BRAT1-206ENST00000493232 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
BRAT1-206ENST00000493232 HUWE1Q7Z6Z7 4374 aaKnown RBP7.25□□□□□ -1.25
BRAT1-206ENST00000493232 KRTAP10-4P60372 401 aaPredicted RBP7.23□□□□□ -1.25
BRAT1-206ENST00000493232 COL7A1Q02388 2944 aa7.22□□□□□ -1.25
BRAT1-206ENST00000493232 INE1O15225 51 aa7.21□□□□□ -1.25
BRAT1-206ENST00000493232 KRTAP4-5Q9BYR2 181 aa7.17□□□□□ -1.26
BRAT1-206ENST00000493232 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
BRAT1-206ENST00000493232 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
BRAT1-206ENST00000493232 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.27
BRAT1-206ENST00000493232 ZNF469Q96JG9 3925 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms