RNA–Protein interactions for RNA: ENST00000488986.1

SNRNP27-205, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 336 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-205ENST00000488986 SPTBN2O15020 2390 aa0.4□□□□□ -2.35
SNRNP27-205ENST00000488986 SPTBN1Q01082 2364 aaKnown RBP0.4□□□□□ -2.35
SNRNP27-205ENST00000488986 ABCA2Q9BZC7 2435 aa0.39□□□□□ -2.35
SNRNP27-205ENST00000488986 PKDREJQ9NTG1 2253 aa0.39□□□□□ -2.35
SNRNP27-205ENST00000488986 HUWE1Q7Z6Z7 4374 aaKnown RBP0.39□□□□□ -2.35
SNRNP27-205ENST00000488986 H0YGG7 62 aa0.39□□□□□ -2.35
SNRNP27-205ENST00000488986 PDE4DIPQ5VU43 2346 aa0.39□□□□□ -2.35
SNRNP27-205ENST00000488986 ATRQ13535 2644 aa0.39□□□□□ -2.35
SNRNP27-205ENST00000488986 F8P00451 2351 aa0.39□□□□□ -2.35
SNRNP27-205ENST00000488986 ABCA12Q86UK0 2595 aa0.39□□□□□ -2.35
SNRNP27-205ENST00000488986 DYNC2H1Q8NCM8 4307 aaKnown RBP0.39□□□□□ -2.35
SNRNP27-205ENST00000488986 PIEZO1Q92508 2521 aa0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 HECTD1Q9ULT8 2610 aa0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 SPENQ96T58 3664 aaKnown RBP0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 M0R2T5 61 aa0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 TMEM167AQ8TBQ9 72 aa0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 CHD6Q8TD26 2715 aa0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 HSPG2P98160 4391 aa0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 ANK3Q12955 4377 aaKnown RBP0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 APOBP04114 4563 aaKnown RBP0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 DNAH6Q9C0G6 4158 aa0.38□□□□□ -2.35
SNRNP27-205ENST00000488986 AKAP9Q99996 3911 aa0.37□□□□□ -2.35
SNRNP27-205ENST00000488986 K7EIM0 57 aa0.37□□□□□ -2.35
SNRNP27-205ENST00000488986 RPL39P5Q59GN2 51 aa0.37□□□□□ -2.35
SNRNP27-205ENST00000488986 SPINK6Q6UWN8 80 aa0.37□□□□□ -2.35
SNRNP27-205ENST00000488986 SMR3AQ99954 134 aa0.37□□□□□ -2.35
SNRNP27-205ENST00000488986 TENM2Q9NT68 2774 aa0.37□□□□□ -2.35
SNRNP27-205ENST00000488986 CSPG4Q6UVK1 2322 aa0.37□□□□□ -2.35
SNRNP27-205ENST00000488986 BDP1A6H8Y1 2624 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 EP300Q09472 2414 aaPredicted RBP0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 FRYQ5TBA9 3013 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 DNAH10Q8IVF4 4471 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 APCP25054 2843 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 DEFB108AA8MXU0 73 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 KALRNO60229 2985 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 PRM1P04553 51 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 KRTAP2-3P0C7H8 128 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 KRTAP2-4Q9BYR9 128 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 KRTAP2-1Q9BYU5 128 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 FLGP20930 4061 aaPredicted RBP0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 MGAQ8IWI9 3026 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 TACC2O95359 2948 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 FAT3Q8TDW7 4589 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 ZFHX4Q86UP3 3567 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 CEP290O15078 2479 aa0.36□□□□□ -2.35
SNRNP27-205ENST00000488986 DMXL1Q9Y485 3027 aa0.35□□□□□ -2.35
SNRNP27-205ENST00000488986 DCHS2Q6V1P9 2916 aa0.35□□□□□ -2.35
SNRNP27-205ENST00000488986 NF1P21359 2839 aa0.35□□□□□ -2.35
SNRNP27-205ENST00000488986 DNAH1Q9P2D7 4330 aa0.35□□□□□ -2.35
SNRNP27-205ENST00000488986 KMT2DO14686 5537 aa0.35□□□□□ -2.35
SNRNP27-205ENST00000488986 DNAH9Q9NYC9 4486 aa0.35□□□□□ -2.35
SNRNP27-205ENST00000488986 M0QZ58 72 aa0.35□□□□□ -2.35
SNRNP27-205ENST00000488986 PKD1L2Q7Z442 2459 aa0.35□□□□□ -2.35
SNRNP27-205ENST00000488986 GCN1Q92616 2671 aaKnown RBP0.34□□□□□ -2.35
SNRNP27-205ENST00000488986 PKD1L1Q8TDX9 2849 aa0.34□□□□□ -2.35
SNRNP27-205ENST00000488986 FLNCQ14315 2725 aa0.34□□□□□ -2.35
SNRNP27-205ENST00000488986 H3BNG1 76 aa0.34□□□□□ -2.36
SNRNP27-205ENST00000488986 CFAP54Q96N23 3096 aa0.34□□□□□ -2.36
SNRNP27-205ENST00000488986 ZZEF1O43149 2961 aa0.34□□□□□ -2.36
SNRNP27-205ENST00000488986 LPAP08519 4548 aa0.34□□□□□ -2.36
SNRNP27-205ENST00000488986 PKHD1P08F94 4074 aa0.34□□□□□ -2.36
SNRNP27-205ENST00000488986 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.36
SNRNP27-205ENST00000488986 RELNP78509 3460 aa0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 PLECQ15149 4684 aaKnown RBP0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 RANBP2P49792 3224 aaKnown RBP0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 CUBNO60494 3623 aa0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 COL6A5A8TX70 2615 aa0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 TNP1P09430 55 aa0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 U3KQA8 63 aa0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 SPTBN5Q9NRC6 3674 aaKnown RBP0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 AKAP6Q13023 2319 aa0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 ITPR3Q14573 2671 aa0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 WNK1Q9H4A3 2382 aa0.33□□□□□ -2.36
SNRNP27-205ENST00000488986 C9orf92A6NGG3 77 aa0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 APELAP0DMC3 54 aa0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 DEFB1P60022 68 aa0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 DEFB110Q30KQ9 67 aa0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 SETXQ7Z333 2677 aaKnown RBP0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 TRIOO75962 3097 aa0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 SYNE1Q8NF91 8797 aaKnown RBP0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 TRRAPQ9Y4A5 3859 aa0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 SMG1Q96Q15 3661 aaKnown RBP0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 NCOR1O75376 2440 aa0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 CREBBPQ92793 2442 aa0.32□□□□□ -2.36
SNRNP27-205ENST00000488986 FAT1Q14517 4588 aa0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 NSD1Q96L73 2696 aaPredicted RBP0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 DYNC1H1Q14204 4646 aaKnown RBP0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 DNAH5Q8TE73 4624 aa0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 SETD2Q9BYW2 2564 aaPredicted RBP0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 COL12A1Q99715 3063 aa0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 A0A096LNI7 61 aa0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 SPART-AS1P0CW21 52 aa0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 CMYA5Q8N3K9 4069 aa0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 COL7A1Q02388 2944 aa0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 HIVEP1P15822 2718 aa0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 NBEAL2Q6ZNJ1 2754 aa0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 USP9YO00507 2555 aaPredicted RBP0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 HTTP42858 3142 aa0.31□□□□□ -2.36
SNRNP27-205ENST00000488986 WDR87Q6ZQQ6 2873 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms