RNA–Protein interactions for RNA: ENST00000488986.1

SNRNP27-205, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 336 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-205ENST00000488986 AEBP2Q6ZN18 517 aaPredicted RBP26,85■■□□□ 1,89
SNRNP27-205ENST00000488986 CHIC1Q5VXU3 224 aa25,55■■□□□ 1,68
SNRNP27-205ENST00000488986 SENP3Q9H4L4 574 aaPredicted RBP22,84■■□□□ 1,25
SNRNP27-205ENST00000488986 PHF23Q9BUL5 403 aaPredicted RBP22,58■■□□□ 1,21
SNRNP27-205ENST00000488986 FOXD1Q16676 465 aa21,31■■□□□ 1
SNRNP27-205ENST00000488986 PLPPR3Q6T4P5 718 aa20,44■□□□□ 0,86
SNRNP27-205ENST00000488986 PPP6R1Q9UPN7 881 aa20,01■□□□□ 0,79
SNRNP27-205ENST00000488986 ADRA2BP18089 450 aa19,96■□□□□ 0,79
SNRNP27-205ENST00000488986 PIAS4Q8N2W9 510 aaPredicted RBP19,94■□□□□ 0,78
SNRNP27-205ENST00000488986 MSH5O43196 834 aa19,87■□□□□ 0,77
SNRNP27-205ENST00000488986 POTEDQ86YR6 584 aa19,29■□□□□ 0,68
SNRNP27-205ENST00000488986 MAPK8IP2Q13387 824 aaPredicted RBP18,31■□□□□ 0,52
SNRNP27-205ENST00000488986 SCAF1Q9H7N4 1312 aaKnown RBP18,2■□□□□ 0,5
SNRNP27-205ENST00000488986 DMRT2Q9Y5R5 561 aa18,13■□□□□ 0,49
SNRNP27-205ENST00000488986 PPP4R3CPQ6ZMV5 832 aa17,95■□□□□ 0,46
SNRNP27-205ENST00000488986 CNKSR2Q8WXI2 1034 aa17,57■□□□□ 0,4
SNRNP27-205ENST00000488986 HOXD11P31277 338 aaPredicted RBP17,49■□□□□ 0,39
SNRNP27-205ENST00000488986 DCAF8L1A6NGE4 600 aa17,43■□□□□ 0,38
SNRNP27-205ENST00000488986 RNF216Q9NWF9 866 aaPredicted RBP17,38■□□□□ 0,37
SNRNP27-205ENST00000488986 NCBP3Q53F19 620 aaKnown RBP17,25■□□□□ 0,35
SNRNP27-205ENST00000488986 NPM3O75607 178 aaKnown RBP17,04■□□□□ 0,32
SNRNP27-205ENST00000488986 CACNB1Q02641 598 aaPredicted RBP17,03■□□□□ 0,32
SNRNP27-205ENST00000488986 RNF39Q9H2S5 420 aa16,98■□□□□ 0,31
SNRNP27-205ENST00000488986 DNAJC5BQ9UF47 199 aa16,82■□□□□ 0,28
SNRNP27-205ENST00000488986 KCNA4P22459 653 aa16,81■□□□□ 0,28
SNRNP27-205ENST00000488986 C1QBPQ07021 282 aaKnown RBP16,71■□□□□ 0,27
SNRNP27-205ENST00000488986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16,69■□□□□ 0,26
SNRNP27-205ENST00000488986 U3KPZ7 1027 aaPredicted RBP16,36■□□□□ 0,21
SNRNP27-205ENST00000488986 SLC4A2P04920 1241 aa16,25■□□□□ 0,19
SNRNP27-205ENST00000488986 SPINK5Q9NQ38 1064 aaPredicted RBP16,12■□□□□ 0,17
SNRNP27-205ENST00000488986 CAPN15O75808 1086 aa16,07■□□□□ 0,16
SNRNP27-205ENST00000488986 DSG3P32926 999 aa15,94■□□□□ 0,14
SNRNP27-205ENST00000488986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15,87■□□□□ 0,13
SNRNP27-205ENST00000488986 HNRNPUL2Q1KMD3 747 aaKnown RBP15,87■□□□□ 0,13
SNRNP27-205ENST00000488986 SLC4A1APQ9BWU0 796 aaKnown RBP15,87■□□□□ 0,13
SNRNP27-205ENST00000488986 APLP2Q06481 763 aa15,85■□□□□ 0,13
SNRNP27-205ENST00000488986 TRHP20396 242 aaPredicted RBP15,84■□□□□ 0,13
SNRNP27-205ENST00000488986 SAMD1Q6SPF0 538 aaPredicted RBP15,8■□□□□ 0,12
SNRNP27-205ENST00000488986 ZNF219Q9P2Y4 722 aaPredicted RBP15,78■□□□□ 0,12
SNRNP27-205ENST00000488986 MYCNP04198 464 aaPredicted RBP15,74■□□□□ 0,11
SNRNP27-205ENST00000488986 ABCB7O75027 752 aa15,73■□□□□ 0,11
SNRNP27-205ENST00000488986 FOXD4L1Q9NU39 408 aa15,63■□□□□ 0,09
SNRNP27-205ENST00000488986 ZBTB22O15209 634 aa15,47■□□□□ 0,07
SNRNP27-205ENST00000488986 POLA2Q14181 598 aa15,42■□□□□ 0,06
SNRNP27-205ENST00000488986 ATF5Q9Y2D1 282 aaPredicted RBP15,42■□□□□ 0,06
SNRNP27-205ENST00000488986 RBM42Q9BTD8 480 aaKnown RBP15,18■□□□□ 0,02
SNRNP27-205ENST00000488986 POTEHQ6S545 545 aa15,13■□□□□ 0,01
SNRNP27-205ENST00000488986 ATXN8OSP0DMR3 200 aa15,1■□□□□ 0,01
SNRNP27-205ENST00000488986 ZBTB12Q9Y330 459 aaPredicted RBP15,07■□□□□ 0
SNRNP27-205ENST00000488986 OSCARQ8IYS5 282 aa14,95□□□□□ -0,02
SNRNP27-205ENST00000488986 AKT1S1Q96B36 256 aa14,85□□□□□ -0,03
SNRNP27-205ENST00000488986 CHRDL2Q6WN34 429 aa14,84□□□□□ -0,03
SNRNP27-205ENST00000488986 CSRNP3Q8WYN3 585 aa14,81□□□□□ -0,04
SNRNP27-205ENST00000488986 FBLN2P98095 1184 aa14,76□□□□□ -0,05
SNRNP27-205ENST00000488986 REM2Q8IYK8 340 aaPredicted RBP14,74□□□□□ -0,05
SNRNP27-205ENST00000488986 EHMT2Q96KQ7 1210 aa14,71□□□□□ -0,05
SNRNP27-205ENST00000488986 MKRN4PQ13434 485 aaPredicted RBP14,7□□□□□ -0,06
SNRNP27-205ENST00000488986 SPDYE2BA6NHP3 402 aa14,63□□□□□ -0,07
SNRNP27-205ENST00000488986 SPDYE6P0CI01 402 aa14,63□□□□□ -0,07
SNRNP27-205ENST00000488986 SPDYE2Q495Y8 402 aa14,63□□□□□ -0,07
SNRNP27-205ENST00000488986 PITPNM1O00562 1244 aa14,59□□□□□ -0,07
SNRNP27-205ENST00000488986 PIP4P2Q8N4L2 257 aa14,52□□□□□ -0,09
SNRNP27-205ENST00000488986 ZNF692Q9BU19 519 aaPredicted RBP14,49□□□□□ -0,09
SNRNP27-205ENST00000488986 SSUH2Q9Y2M2 353 aa14,46□□□□□ -0,09
SNRNP27-205ENST00000488986 FXR2P51116 673 aaKnown RBP eCLIP14,42□□□□□ -0,1
SNRNP27-205ENST00000488986 CLEC11AQ9Y240 323 aa14,37□□□□□ -0,11
SNRNP27-205ENST00000488986 SPDYE1Q8NFV5 336 aaPredicted RBP14,35□□□□□ -0,11
SNRNP27-205ENST00000488986 PABPN1Q86U42 306 aaKnown RBP eCLIP14,29□□□□□ -0,12
SNRNP27-205ENST00000488986 HAX1O00165 279 aa14,23□□□□□ -0,13
SNRNP27-205ENST00000488986 SP7Q8TDD2 431 aaPredicted RBP14,22□□□□□ -0,13
SNRNP27-205ENST00000488986 PRKAR2AP13861 404 aaKnown RBP14,21□□□□□ -0,13
SNRNP27-205ENST00000488986 PRR29P0C7W0 189 aa14,12□□□□□ -0,15
SNRNP27-205ENST00000488986 CHADLQ6NUI6 762 aa14,11□□□□□ -0,15
SNRNP27-205ENST00000488986 EVX2Q03828 476 aa14,09□□□□□ -0,15
SNRNP27-205ENST00000488986 SPDYE4A6NLX3 237 aa14,03□□□□□ -0,16
SNRNP27-205ENST00000488986 C19orf67A6NJJ6 358 aa13,96□□□□□ -0,17
SNRNP27-205ENST00000488986 STAG3Q9UJ98 1225 aa13,87□□□□□ -0,19
SNRNP27-205ENST00000488986 FARP1Q9Y4F1 1045 aaPredicted RBP13,86□□□□□ -0,19
SNRNP27-205ENST00000488986 CREBZFQ9NS37 354 aa13,8□□□□□ -0,2
SNRNP27-205ENST00000488986 CD44P16070 742 aaKnown RBP13,77□□□□□ -0,21
SNRNP27-205ENST00000488986 GABBR2O75899 941 aa13,75□□□□□ -0,21
SNRNP27-205ENST00000488986 PROM2Q8N271 834 aa13,68□□□□□ -0,22
SNRNP27-205ENST00000488986 ZRANB1Q9UGI0 708 aa13,59□□□□□ -0,23
SNRNP27-205ENST00000488986 MNX1P50219 401 aaPredicted RBP13,57□□□□□ -0,24
SNRNP27-205ENST00000488986 ZNF579Q8NAF0 562 aaKnown RBP13,54□□□□□ -0,24
SNRNP27-205ENST00000488986 NPM1P06748 294 aaKnown RBP eCLIP13,51□□□□□ -0,259e-7■■■■■ 49,4
SNRNP27-205ENST00000488986 CLCN6P51797 869 aa13,48□□□□□ -0,25
SNRNP27-205ENST00000488986 PAK3O75914 559 aaPredicted RBP13,47□□□□□ -0,25
SNRNP27-205ENST00000488986 POTEIP0CG38 1075 aa13,47□□□□□ -0,25
SNRNP27-205ENST00000488986 FKBP8Q14318 412 aa13,45□□□□□ -0,26
SNRNP27-205ENST00000488986 PHF12Q96QT6 1004 aa13,43□□□□□ -0,26
SNRNP27-205ENST00000488986 GALR2O43603 387 aaPredicted RBP13,41□□□□□ -0,26
SNRNP27-205ENST00000488986 DCBLD2Q96PD2 775 aa13,39□□□□□ -0,27
SNRNP27-205ENST00000488986 MIER1Q8N108 512 aa13,38□□□□□ -0,27
SNRNP27-205ENST00000488986 LHX8Q68G74 356 aa13,34□□□□□ -0,27
SNRNP27-205ENST00000488986 PLEKHG5O94827 1062 aa13,33□□□□□ -0,28
SNRNP27-205ENST00000488986 TSPYL2Q9H2G4 693 aaPredicted RBP13,33□□□□□ -0,28
SNRNP27-205ENST00000488986 PLCD3Q8N3E9 789 aa13,29□□□□□ -0,28
SNRNP27-205ENST00000488986 MS4A3Q96HJ5 214 aa13,24□□□□□ -0,29
SNRNP27-205ENST00000488986 CCDC61Q9Y6R9 512 aa13,24□□□□□ -0,29
Retrieved 100 of 20,778 RNA–protein pairs in 9,9 ms