RNA–Protein interactions for RNA: ENST00000488986.1

SNRNP27-205, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 336 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-205ENST00000488986 AEBP2Q6ZN18 517 aaPredicted RBP26.85■■□□□ 1.89
SNRNP27-205ENST00000488986 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
SNRNP27-205ENST00000488986 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
SNRNP27-205ENST00000488986 PHF23Q9BUL5 403 aaPredicted RBP22.58■■□□□ 1.21
SNRNP27-205ENST00000488986 FOXD1Q16676 465 aa21.31■■□□□ 1
SNRNP27-205ENST00000488986 PLPPR3Q6T4P5 718 aa20.44■□□□□ 0.86
SNRNP27-205ENST00000488986 PPP6R1Q9UPN7 881 aa20.01■□□□□ 0.79
SNRNP27-205ENST00000488986 ADRA2BP18089 450 aa19.96■□□□□ 0.79
SNRNP27-205ENST00000488986 PIAS4Q8N2W9 510 aaPredicted RBP19.94■□□□□ 0.78
SNRNP27-205ENST00000488986 MSH5O43196 834 aa19.87■□□□□ 0.77
SNRNP27-205ENST00000488986 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
SNRNP27-205ENST00000488986 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
SNRNP27-205ENST00000488986 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
SNRNP27-205ENST00000488986 DMRT2Q9Y5R5 561 aa18.13■□□□□ 0.49
SNRNP27-205ENST00000488986 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
SNRNP27-205ENST00000488986 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
SNRNP27-205ENST00000488986 HOXD11P31277 338 aaPredicted RBP17.49■□□□□ 0.39
SNRNP27-205ENST00000488986 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
SNRNP27-205ENST00000488986 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
SNRNP27-205ENST00000488986 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
SNRNP27-205ENST00000488986 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
SNRNP27-205ENST00000488986 CACNB1Q02641 598 aaPredicted RBP17.03■□□□□ 0.32
SNRNP27-205ENST00000488986 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
SNRNP27-205ENST00000488986 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
SNRNP27-205ENST00000488986 KCNA4P22459 653 aa16.81■□□□□ 0.28
SNRNP27-205ENST00000488986 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
SNRNP27-205ENST00000488986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNRNP27-205ENST00000488986 U3KPZ7 1027 aaPredicted RBP16.36■□□□□ 0.21
SNRNP27-205ENST00000488986 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
SNRNP27-205ENST00000488986 SPINK5Q9NQ38 1064 aaPredicted RBP16.12■□□□□ 0.17
SNRNP27-205ENST00000488986 CAPN15O75808 1086 aa16.07■□□□□ 0.16
SNRNP27-205ENST00000488986 DSG3P32926 999 aa15.94■□□□□ 0.14
SNRNP27-205ENST00000488986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
SNRNP27-205ENST00000488986 HNRNPUL2Q1KMD3 747 aaKnown RBP15.87■□□□□ 0.13
SNRNP27-205ENST00000488986 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
SNRNP27-205ENST00000488986 APLP2Q06481 763 aa15.85■□□□□ 0.13
SNRNP27-205ENST00000488986 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
SNRNP27-205ENST00000488986 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
SNRNP27-205ENST00000488986 ZNF219Q9P2Y4 722 aaPredicted RBP15.78■□□□□ 0.12
SNRNP27-205ENST00000488986 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
SNRNP27-205ENST00000488986 ABCB7O75027 752 aa15.73■□□□□ 0.11
SNRNP27-205ENST00000488986 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
SNRNP27-205ENST00000488986 ZBTB22O15209 634 aa15.47■□□□□ 0.07
SNRNP27-205ENST00000488986 POLA2Q14181 598 aa15.42■□□□□ 0.06
SNRNP27-205ENST00000488986 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
SNRNP27-205ENST00000488986 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
SNRNP27-205ENST00000488986 POTEHQ6S545 545 aa15.13■□□□□ 0.01
SNRNP27-205ENST00000488986 ATXN8OSP0DMR3 200 aa15.1■□□□□ 0.01
SNRNP27-205ENST00000488986 ZBTB12Q9Y330 459 aaPredicted RBP15.07■□□□□ 0
SNRNP27-205ENST00000488986 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
SNRNP27-205ENST00000488986 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
SNRNP27-205ENST00000488986 CHRDL2Q6WN34 429 aa14.84□□□□□ -0.03
SNRNP27-205ENST00000488986 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
SNRNP27-205ENST00000488986 FBLN2P98095 1184 aa14.76□□□□□ -0.05
SNRNP27-205ENST00000488986 REM2Q8IYK8 340 aaPredicted RBP14.74□□□□□ -0.05
SNRNP27-205ENST00000488986 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
SNRNP27-205ENST00000488986 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
SNRNP27-205ENST00000488986 SPDYE2BA6NHP3 402 aa14.63□□□□□ -0.07
SNRNP27-205ENST00000488986 SPDYE6P0CI01 402 aa14.63□□□□□ -0.07
SNRNP27-205ENST00000488986 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
SNRNP27-205ENST00000488986 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
SNRNP27-205ENST00000488986 PIP4P2Q8N4L2 257 aa14.52□□□□□ -0.09
SNRNP27-205ENST00000488986 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
SNRNP27-205ENST00000488986 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
SNRNP27-205ENST00000488986 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
SNRNP27-205ENST00000488986 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
SNRNP27-205ENST00000488986 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
SNRNP27-205ENST00000488986 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNRNP27-205ENST00000488986 HAX1O00165 279 aa14.23□□□□□ -0.13
SNRNP27-205ENST00000488986 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
SNRNP27-205ENST00000488986 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
SNRNP27-205ENST00000488986 PRR29P0C7W0 189 aa14.12□□□□□ -0.15
SNRNP27-205ENST00000488986 CHADLQ6NUI6 762 aa14.11□□□□□ -0.15
SNRNP27-205ENST00000488986 EVX2Q03828 476 aa14.09□□□□□ -0.15
SNRNP27-205ENST00000488986 SPDYE4A6NLX3 237 aa14.03□□□□□ -0.16
SNRNP27-205ENST00000488986 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
SNRNP27-205ENST00000488986 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
SNRNP27-205ENST00000488986 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
SNRNP27-205ENST00000488986 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
SNRNP27-205ENST00000488986 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
SNRNP27-205ENST00000488986 GABBR2O75899 941 aa13.75□□□□□ -0.21
SNRNP27-205ENST00000488986 PROM2Q8N271 834 aa13.68□□□□□ -0.22
SNRNP27-205ENST00000488986 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
SNRNP27-205ENST00000488986 MNX1P50219 401 aaPredicted RBP13.57□□□□□ -0.24
SNRNP27-205ENST00000488986 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
SNRNP27-205ENST00000488986 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.259e-7■■■■■ 49.4
SNRNP27-205ENST00000488986 CLCN6P51797 869 aa13.48□□□□□ -0.25
SNRNP27-205ENST00000488986 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
SNRNP27-205ENST00000488986 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
SNRNP27-205ENST00000488986 FKBP8Q14318 412 aa13.45□□□□□ -0.26
SNRNP27-205ENST00000488986 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
SNRNP27-205ENST00000488986 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
SNRNP27-205ENST00000488986 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
SNRNP27-205ENST00000488986 MIER1Q8N108 512 aa13.38□□□□□ -0.27
SNRNP27-205ENST00000488986 LHX8Q68G74 356 aa13.34□□□□□ -0.27
SNRNP27-205ENST00000488986 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
SNRNP27-205ENST00000488986 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
SNRNP27-205ENST00000488986 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
SNRNP27-205ENST00000488986 MS4A3Q96HJ5 214 aa13.24□□□□□ -0.29
SNRNP27-205ENST00000488986 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms