RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 HECTD1Q9ULT8 2610 aa1.29□□□□□ -2.2
VPS8-224ENST00000488255 RPS29P62273 56 aaKnown RBP1.29□□□□□ -2.2
VPS8-224ENST00000488255 DEFB136Q30KP8 78 aa1.29□□□□□ -2.2
VPS8-224ENST00000488255 LINC01556Q5JQF7 62 aa1.29□□□□□ -2.2
VPS8-224ENST00000488255 SPTBN4Q9H254 2564 aa1.29□□□□□ -2.2
VPS8-224ENST00000488255 TENM2Q9NT68 2774 aa1.28□□□□□ -2.2
VPS8-224ENST00000488255 SRCAPQ6ZRS2 3230 aa1.28□□□□□ -2.2
VPS8-224ENST00000488255 CEP250Q9BV73 2442 aa1.28□□□□□ -2.2
VPS8-224ENST00000488255 NAV2Q8IVL1 2488 aa1.28□□□□□ -2.2
VPS8-224ENST00000488255 CEP350Q5VT06 3117 aa1.27□□□□□ -2.21
VPS8-224ENST00000488255 TNRC18O15417 2968 aaPredicted RBP1.27□□□□□ -2.21
VPS8-224ENST00000488255 CHD9Q3L8U1 2897 aa1.27□□□□□ -2.21
VPS8-224ENST00000488255 CHD6Q8TD26 2715 aa1.27□□□□□ -2.21
VPS8-224ENST00000488255 EP300Q09472 2414 aaPredicted RBP1.27□□□□□ -2.21
VPS8-224ENST00000488255 VWFP04275 2813 aa1.26□□□□□ -2.21
VPS8-224ENST00000488255 HTTP42858 3142 aa1.26□□□□□ -2.21
VPS8-224ENST00000488255 POLQO75417 2590 aa1.25□□□□□ -2.21
VPS8-224ENST00000488255 CCDC168Q8NDH2 2452 aa1.25□□□□□ -2.21
VPS8-224ENST00000488255 DMBT1Q9UGM3 2413 aaPredicted RBP1.25□□□□□ -2.21
VPS8-224ENST00000488255 WDR87Q6ZQQ6 2873 aa1.24□□□□□ -2.21
VPS8-224ENST00000488255 TENM4Q6N022 2769 aa1.24□□□□□ -2.21
VPS8-224ENST00000488255 KRTAP10-4P60372 401 aaPredicted RBP1.23□□□□□ -2.21
VPS8-224ENST00000488255 OTOGQ6ZRI0 2925 aa1.22□□□□□ -2.21
VPS8-224ENST00000488255 FAM186AA6NE01 2351 aa1.22□□□□□ -2.21
VPS8-224ENST00000488255 SETD2Q9BYW2 2564 aaPredicted RBP1.22□□□□□ -2.21
VPS8-224ENST00000488255 ZZEF1O43149 2961 aa1.22□□□□□ -2.21
VPS8-224ENST00000488255 RANBP2P49792 3224 aaKnown RBP1.21□□□□□ -2.22
VPS8-224ENST00000488255 UNC80Q8N2C7 3258 aa1.21□□□□□ -2.22
VPS8-224ENST00000488255 FRYQ5TBA9 3013 aa1.21□□□□□ -2.22
VPS8-224ENST00000488255 CHD8Q9HCK8 2581 aa1.21□□□□□ -2.22
VPS8-224ENST00000488255 LAMA1P25391 3075 aa1.21□□□□□ -2.22
VPS8-224ENST00000488255 NBEAQ8NFP9 2946 aa1.2□□□□□ -2.22
VPS8-224ENST00000488255 CELSR1Q9NYQ6 3014 aa1.2□□□□□ -2.22
VPS8-224ENST00000488255 AKAP13Q12802 2813 aa1.2□□□□□ -2.22
VPS8-224ENST00000488255 A0A096LPF7 62 aa1.2□□□□□ -2.22
VPS8-224ENST00000488255 C5orf42Q9H799 3197 aa1.2□□□□□ -2.22
VPS8-224ENST00000488255 ATRQ13535 2644 aa1.19□□□□□ -2.22
VPS8-224ENST00000488255 KALRNO60229 2985 aa1.19□□□□□ -2.22
VPS8-224ENST00000488255 LAMA2P24043 3122 aaKnown RBP1.19□□□□□ -2.22
VPS8-224ENST00000488255 UTRNP46939 3433 aa1.19□□□□□ -2.22
VPS8-224ENST00000488255 TRIOO75962 3097 aa1.19□□□□□ -2.22
VPS8-224ENST00000488255 EPG5Q9HCE0 2579 aa1.18□□□□□ -2.22
VPS8-224ENST00000488255 FRYLO94915 3013 aa1.18□□□□□ -2.22
VPS8-224ENST00000488255 HIVEP3Q5T1R4 2406 aa1.18□□□□□ -2.22
VPS8-224ENST00000488255 BDP1A6H8Y1 2624 aa1.18□□□□□ -2.22
VPS8-224ENST00000488255 COL6A3P12111 3177 aa1.17□□□□□ -2.22
VPS8-224ENST00000488255 USP24Q9UPU5 2620 aa1.17□□□□□ -2.22
VPS8-224ENST00000488255 KRTAP2-3P0C7H8 128 aa1.17□□□□□ -2.22
VPS8-224ENST00000488255 SMR3AQ99954 134 aa1.17□□□□□ -2.22
VPS8-224ENST00000488255 KRTAP2-4Q9BYR9 128 aa1.17□□□□□ -2.22
VPS8-224ENST00000488255 KRTAP2-1Q9BYU5 128 aa1.17□□□□□ -2.22
VPS8-224ENST00000488255 CFAP54Q96N23 3096 aa1.17□□□□□ -2.22
VPS8-224ENST00000488255 BRCA2P51587 3418 aa1.17□□□□□ -2.22
VPS8-224ENST00000488255 MTORP42345 2549 aa1.17□□□□□ -2.22
VPS8-224ENST00000488255 NCOR2Q9Y618 2525 aa1.17□□□□□ -2.22
VPS8-224ENST00000488255 MKI67P46013 3256 aaKnown RBP1.16□□□□□ -2.22
VPS8-224ENST00000488255 APCP25054 2843 aa1.16□□□□□ -2.22
VPS8-224ENST00000488255 RIF1Q5UIP0 2472 aaKnown RBP1.16□□□□□ -2.22
VPS8-224ENST00000488255 XIRP2A4UGR9 3374 aa1.16□□□□□ -2.22
VPS8-224ENST00000488255 DNAH14Q0VDD8 3507 aa1.15□□□□□ -2.22
VPS8-224ENST00000488255 PRUNE2Q8WUY3 3088 aa1.15□□□□□ -2.22
VPS8-224ENST00000488255 LRRK2Q5S007 2527 aa1.15□□□□□ -2.23
VPS8-224ENST00000488255 CRYBG3Q68DQ2 2970 aa1.15□□□□□ -2.23
VPS8-224ENST00000488255 PTPN13Q12923 2485 aa1.14□□□□□ -2.23
VPS8-224ENST00000488255 SZT2Q5T011 3432 aa1.14□□□□□ -2.23
VPS8-224ENST00000488255 DMXL2Q8TDJ6 3036 aa1.14□□□□□ -2.23
VPS8-224ENST00000488255 TACC2O95359 2948 aa1.14□□□□□ -2.23
VPS8-224ENST00000488255 VPS13AQ96RL7 3174 aa1.14□□□□□ -2.23
VPS8-224ENST00000488255 PIEZO1Q92508 2521 aa1.14□□□□□ -2.23
VPS8-224ENST00000488255 FREM2Q5SZK8 3169 aa1.13□□□□□ -2.23
VPS8-224ENST00000488255 USP34Q70CQ2 3546 aa1.13□□□□□ -2.23
VPS8-224ENST00000488255 WDFY3Q8IZQ1 3526 aa1.13□□□□□ -2.23
VPS8-224ENST00000488255 WDFY4Q6ZS81 3184 aa1.13□□□□□ -2.23
VPS8-224ENST00000488255 ANKHD1Q8IWZ3 2542 aaKnown RBP1.13□□□□□ -2.23
VPS8-224ENST00000488255 ACANP16112 2415 aa1.13□□□□□ -2.23
VPS8-224ENST00000488255 LAMA3Q16787 3333 aa1.12□□□□□ -2.23
VPS8-224ENST00000488255 CSMD3Q7Z407 3707 aa1.12□□□□□ -2.23
VPS8-224ENST00000488255 CFAP47Q6ZTR5 3102 aa1.12□□□□□ -2.23
VPS8-224ENST00000488255 KRTAP8-1Q8IUC2 63 aa1.12□□□□□ -2.23
VPS8-224ENST00000488255 VCANP13611 3396 aa1.11□□□□□ -2.23
VPS8-224ENST00000488255 FLNCQ14315 2725 aa1.11□□□□□ -2.23
VPS8-224ENST00000488255 LRBAP50851 2863 aa1.11□□□□□ -2.23
VPS8-224ENST00000488255 ADGRG4Q8IZF6 3080 aa1.1□□□□□ -2.23
VPS8-224ENST00000488255 CACNA1AO00555 2505 aa1.1□□□□□ -2.23
VPS8-224ENST00000488255 CELSR3Q9NYQ7 3312 aa1.1□□□□□ -2.23
VPS8-224ENST00000488255 SPTBN5Q9NRC6 3674 aaKnown RBP1.1□□□□□ -2.23
VPS8-224ENST00000488255 COL12A1Q99715 3063 aa1.09□□□□□ -2.23
VPS8-224ENST00000488255 DCHS2Q6V1P9 2916 aa1.09□□□□□ -2.23
VPS8-224ENST00000488255 SPEGQ15772 3267 aa1.09□□□□□ -2.23
VPS8-224ENST00000488255 NF1P21359 2839 aa1.09□□□□□ -2.24
VPS8-224ENST00000488255 MAP1AP78559 2803 aaPredicted RBP1.08□□□□□ -2.24
VPS8-224ENST00000488255 HTN3P15516 51 aa1.08□□□□□ -2.24
VPS8-224ENST00000488255 DCHS1Q96JQ0 3298 aa1.08□□□□□ -2.24
VPS8-224ENST00000488255 HRNRQ86YZ3 2850 aaPredicted RBP1.08□□□□□ -2.24
VPS8-224ENST00000488255 ITPR3Q14573 2671 aa1.08□□□□□ -2.24
VPS8-224ENST00000488255 USP9YO00507 2555 aaPredicted RBP1.07□□□□□ -2.24
VPS8-224ENST00000488255 CDH23Q9H251 3354 aa1.07□□□□□ -2.24
VPS8-224ENST00000488255 SONP18583 2426 aaKnown RBP1.07□□□□□ -2.24
VPS8-224ENST00000488255 SETXQ7Z333 2677 aaKnown RBP1.07□□□□□ -2.24
VPS8-224ENST00000488255 VPS13DQ5THJ4 4388 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms