RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 CKS1BP61024 79 aa1.52□□□□□ -2.17
GTF3A-207ENST00000482655 KRTAP19-2Q3LHN2 52 aa1.52□□□□□ -2.17
GTF3A-207ENST00000482655 LYRM7Q5U5X0 104 aa1.52□□□□□ -2.17
GTF3A-207ENST00000482655 SPANXN1Q5VSR9 72 aa1.52□□□□□ -2.17
GTF3A-207ENST00000482655 SOSTDC1Q6X4U4 206 aa1.52□□□□□ -2.17
GTF3A-207ENST00000482655 MUSTN1Q8IVN3 82 aa1.52□□□□□ -2.17
GTF3A-207ENST00000482655 ZNF625Q96I27 306 aaPredicted RBP1.52□□□□□ -2.17
GTF3A-207ENST00000482655 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.51□□□□□ -2.17
GTF3A-207ENST00000482655 A8MWV9 139 aa1.51□□□□□ -2.17
GTF3A-207ENST00000482655 I3L3M4 83 aa1.51□□□□□ -2.17
GTF3A-207ENST00000482655 NDUFA1O15239 70 aa1.51□□□□□ -2.17
GTF3A-207ENST00000482655 TRACP01848 142 aa1.51□□□□□ -2.17
GTF3A-207ENST00000482655 SPINK8P0C7L1 97 aa1.51□□□□□ -2.17
GTF3A-207ENST00000482655 TIMM8BQ9Y5J9 83 aaPredicted RBP1.51□□□□□ -2.17
GTF3A-207ENST00000482655 SSPOA2VEC9 5147 aa1.51□□□□□ -2.17
GTF3A-207ENST00000482655 TEX49A0A1B0GTD5 131 aa1.5□□□□□ -2.17
GTF3A-207ENST00000482655 ACYP1P07311 99 aa1.5□□□□□ -2.17
GTF3A-207ENST00000482655 COX6A2Q02221 97 aa1.5□□□□□ -2.17
GTF3A-207ENST00000482655 CIRBPQ14011 172 aaKnown RBP1.5□□□□□ -2.17
GTF3A-207ENST00000482655 TPRXLQ17RH7 258 aa1.5□□□□□ -2.17
GTF3A-207ENST00000482655 TMEM170BQ5T4T1 132 aa1.5□□□□□ -2.17
GTF3A-207ENST00000482655 LINC00308Q8TCZ7 52 aa1.5□□□□□ -2.17
GTF3A-207ENST00000482655 TRBV10-1A0A0K0K1A3 114 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 C9JAW5 83 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 CCDC179H3BU77 68 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 CRYGAP11844 174 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 HTN1P15515 57 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 S100A4P26447 101 aaKnown RBP1.49□□□□□ -2.17
GTF3A-207ENST00000482655 SNRPD3P62318 126 aaKnown RBP1.49□□□□□ -2.17
GTF3A-207ENST00000482655 RPS28P62857 69 aaKnown RBP1.49□□□□□ -2.17
GTF3A-207ENST00000482655 ATXN8Q156A1 80 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 LINC01556Q5JQF7 62 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 LINC00643Q86TS7 51 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 CDC42SE2Q9NRR3 84 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 CDKN2A-AS1Q9UH64 79 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 NDUFA12Q9UI09 145 aa1.49□□□□□ -2.17
GTF3A-207ENST00000482655 USH2AO75445 5202 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 TRGV2A0A075B6R0 118 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 TRAV12-3A0A0B4J271 114 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 FAM236DA0A1B0GTK5 79 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 A0A1B0GX51 115 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 MGPP08493 103 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 FAM236CP0DP71 79 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 PCOTHQ58A44 107 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 KRTAP26-1Q6PEX3 210 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 C7orf65Q6ZTY9 151 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 COA5Q86WW8 74 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 LINC00526Q96FQ7 95 aa1.48□□□□□ -2.17
GTF3A-207ENST00000482655 FCGBPQ9Y6R7 5405 aaPredicted RBP1.47□□□□□ -2.17
GTF3A-207ENST00000482655 TRBV10-3A0A0K0K1G6 114 aa1.47□□□□□ -2.17
GTF3A-207ENST00000482655 TRBV6-4A0A1B0GX49 114 aa1.47□□□□□ -2.17
GTF3A-207ENST00000482655 UQCRQO14949 82 aa1.47□□□□□ -2.17
GTF3A-207ENST00000482655 BCE1O60756 84 aa1.47□□□□□ -2.17
GTF3A-207ENST00000482655 KRTAP12-1P59990 96 aa1.47□□□□□ -2.17
GTF3A-207ENST00000482655 KRTAP13-4Q3LI77 160 aa1.47□□□□□ -2.17
GTF3A-207ENST00000482655 C9orf163Q8N9P6 203 aa1.47□□□□□ -2.17
GTF3A-207ENST00000482655 CLEC2BQ92478 149 aa1.47□□□□□ -2.17
GTF3A-207ENST00000482655 TMEM126AQ9H061 195 aa1.47□□□□□ -2.17
GTF3A-207ENST00000482655 PRO0255Q9UI72 69 aa1.47□□□□□ -2.17
GTF3A-207ENST00000482655 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.46□□□□□ -2.18
GTF3A-207ENST00000482655 TRGV1A0A0A0MS02 117 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 IGKV2-29A2NJV5 120 aaPredicted RBP1.46□□□□□ -2.18
GTF3A-207ENST00000482655 H0YGX0 51 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 NDUFC2O95298 119 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 CRPP02741 224 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 COX7CP15954 63 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 MT1HP80294 61 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 ZNF56Q15929 161 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 Q6JHZ5 121 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 SFTA2Q6UW10 78 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 SPACA4Q8TDM5 124 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 CYSTM1Q9H1C7 97 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 PLAC8Q9NZF1 115 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 SS18L2Q9UHA2 77 aa1.46□□□□□ -2.18
GTF3A-207ENST00000482655 GVQW2A0A096LPI5 108 aaPredicted RBP1.45□□□□□ -2.18
GTF3A-207ENST00000482655 TRAV13-2A0A0B4J235 113 aa1.45□□□□□ -2.18
GTF3A-207ENST00000482655 SNCGO76070 127 aa1.45□□□□□ -2.18
GTF3A-207ENST00000482655 COX6CP09669 75 aa1.45□□□□□ -2.18
GTF3A-207ENST00000482655 BAALC-AS2P0C853 105 aa1.45□□□□□ -2.18
GTF3A-207ENST00000482655 MEIG1Q5JSS6 88 aa1.45□□□□□ -2.18
GTF3A-207ENST00000482655 FAM74A4Q5TZK3 123 aa1.45□□□□□ -2.18
GTF3A-207ENST00000482655 ENHOQ6UWT2 76 aa1.45□□□□□ -2.18
GTF3A-207ENST00000482655 SMIM11BQ8TCY0 68 aa1.45□□□□□ -2.18
GTF3A-207ENST00000482655 LINC00846Q9NV44 126 aa1.45□□□□□ -2.18
GTF3A-207ENST00000482655 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
GTF3A-207ENST00000482655 LOC110117498A0A087WWA1 95 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 TRBV6-8A0A0A6YYG3 113 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 TRBV7-6A0A0J9YX20 115 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 FAM236AA0A1B0GUQ0 79 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 FAM236BA0A1B0GV22 79 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 CCKP06307 115 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 KLKP1Q107X0 134 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 COX17Q14061 63 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 Q5XG85 94 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 SPINK6Q6UWN8 80 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 Q8IZM0 81 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 COPS9Q8WXC6 57 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 DPH3Q96FX2 82 aa1.44□□□□□ -2.18
GTF3A-207ENST00000482655 TRBV7-4A0A0J9YYF1 115 aa1.43□□□□□ -2.18
GTF3A-207ENST00000482655 LINC00959A0A1B0GUT2 108 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 212.4 ms