RNA–Protein interactions for RNA: ENST00000470589.1

GABRR3-201, Transcript of gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene), humanhuman

TSL 1 (best)

Gene GABRR3, Length 4,826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR3-201ENST00000470589 H0YAA0 97 aa2.12□□□□□ -2.07
GABRR3-201ENST00000470589 XP32Q5T750 250 aa2.12□□□□□ -2.07
GABRR3-201ENST00000470589 PCNTO95613 3336 aa2.11□□□□□ -2.07
GABRR3-201ENST00000470589 BAHCC1Q9P281 2608 aa2.11□□□□□ -2.07
GABRR3-201ENST00000470589 TRIOO75962 3097 aa2.1□□□□□ -2.07
GABRR3-201ENST00000470589 UTRNP46939 3433 aa2.1□□□□□ -2.07
GABRR3-201ENST00000470589 LAMA2P24043 3122 aaKnown RBP2.1□□□□□ -2.07
GABRR3-201ENST00000470589 MKI67P46013 3256 aaKnown RBP2.1□□□□□ -2.07
GABRR3-201ENST00000470589 WDFY4Q6ZS81 3184 aa2.1□□□□□ -2.07
GABRR3-201ENST00000470589 P0C880 135 aa2.09□□□□□ -2.07
GABRR3-201ENST00000470589 HIVEP1P15822 2718 aa2.09□□□□□ -2.07
GABRR3-201ENST00000470589 VPS13AQ96RL7 3174 aa2.09□□□□□ -2.07
GABRR3-201ENST00000470589 KALRNO60229 2985 aa2.09□□□□□ -2.08
GABRR3-201ENST00000470589 PRUNE2Q8WUY3 3088 aa2.08□□□□□ -2.08
GABRR3-201ENST00000470589 LRBAP50851 2863 aa2.07□□□□□ -2.08
GABRR3-201ENST00000470589 HRNRQ86YZ3 2850 aaPredicted RBP2.07□□□□□ -2.08
GABRR3-201ENST00000470589 LAMA3Q16787 3333 aa2.06□□□□□ -2.08
GABRR3-201ENST00000470589 ATMQ13315 3056 aa2.05□□□□□ -2.08
GABRR3-201ENST00000470589 NBEAQ8NFP9 2946 aa2.05□□□□□ -2.08
GABRR3-201ENST00000470589 ADGRG4Q8IZF6 3080 aa2.05□□□□□ -2.08
GABRR3-201ENST00000470589 KRTAP10-8P60410 259 aa2.04□□□□□ -2.08
GABRR3-201ENST00000470589 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
GABRR3-201ENST00000470589 ZZEF1O43149 2961 aa2.04□□□□□ -2.08
GABRR3-201ENST00000470589 LAMA1P25391 3075 aa2.03□□□□□ -2.08
GABRR3-201ENST00000470589 COL12A1Q99715 3063 aa2.03□□□□□ -2.09
GABRR3-201ENST00000470589 PRO2289Q9P1D8 64 aa2.02□□□□□ -2.09
GABRR3-201ENST00000470589 UNC80Q8N2C7 3258 aa2.02□□□□□ -2.09
GABRR3-201ENST00000470589 FRYLO94915 3013 aa2.02□□□□□ -2.09
GABRR3-201ENST00000470589 A0A1B0GVY2 172 aa2.02□□□□□ -2.09
GABRR3-201ENST00000470589 ZANQ9Y493 2812 aa2.01□□□□□ -2.09
GABRR3-201ENST00000470589 KRTAP3-1Q9BYR8 98 aa2.01□□□□□ -2.09
GABRR3-201ENST00000470589 TACC2O95359 2948 aa2□□□□□ -2.09
GABRR3-201ENST00000470589 DMXL2Q8TDJ6 3036 aa2□□□□□ -2.09
GABRR3-201ENST00000470589 TNRC18O15417 2968 aaPredicted RBP1.99□□□□□ -2.09
GABRR3-201ENST00000470589 KRTAP13-4Q3LI77 160 aa1.99□□□□□ -2.09
GABRR3-201ENST00000470589 CELSR2Q9HCU4 2923 aa1.99□□□□□ -2.09
GABRR3-201ENST00000470589 EYSQ5T1H1 3165 aa1.99□□□□□ -2.09
GABRR3-201ENST00000470589 BRCA2P51587 3418 aa1.99□□□□□ -2.09
GABRR3-201ENST00000470589 DCHS2Q6V1P9 2916 aa1.99□□□□□ -2.09
GABRR3-201ENST00000470589 TENM4Q6N022 2769 aa1.98□□□□□ -2.09
GABRR3-201ENST00000470589 ASH1LQ9NR48 2969 aaKnown RBP1.98□□□□□ -2.09
GABRR3-201ENST00000470589 BOD1L1Q8NFC6 3051 aa1.97□□□□□ -2.09
GABRR3-201ENST00000470589 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
GABRR3-201ENST00000470589 KRTAP4-8Q9BYQ9 185 aa1.96□□□□□ -2.1
GABRR3-201ENST00000470589 TGP01266 2768 aa1.96□□□□□ -2.1
GABRR3-201ENST00000470589 MXRA5Q9NR99 2828 aa1.96□□□□□ -2.1
GABRR3-201ENST00000470589 CDH23Q9H251 3354 aa1.96□□□□□ -2.1
GABRR3-201ENST00000470589 KRTAP12-2P59991 146 aa1.96□□□□□ -2.1
GABRR3-201ENST00000470589 XIRP2A4UGR9 3374 aa1.95□□□□□ -2.1
GABRR3-201ENST00000470589 NF1P21359 2839 aa1.95□□□□□ -2.1
GABRR3-201ENST00000470589 KRTAP10-10P60014 251 aa1.94□□□□□ -2.1
GABRR3-201ENST00000470589 FBN2P35556 2912 aa1.94□□□□□ -2.1
GABRR3-201ENST00000470589 TENM3Q9P273 2699 aa1.93□□□□□ -2.1
GABRR3-201ENST00000470589 COL6A3P12111 3177 aa1.93□□□□□ -2.1
GABRR3-201ENST00000470589 CELSR3Q9NYQ7 3312 aa1.93□□□□□ -2.1
GABRR3-201ENST00000470589 SZT2Q5T011 3432 aa1.93□□□□□ -2.1
GABRR3-201ENST00000470589 VCANP13611 3396 aa1.93□□□□□ -2.1
GABRR3-201ENST00000470589 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
GABRR3-201ENST00000470589 KRTAP10-6P60371 365 aaPredicted RBP1.92□□□□□ -2.1
GABRR3-201ENST00000470589 KRTAP9-8Q9BYQ0 159 aa1.92□□□□□ -2.1
GABRR3-201ENST00000470589 CELSR1Q9NYQ6 3014 aa1.92□□□□□ -2.1
GABRR3-201ENST00000470589 PDZD2O15018 2839 aa1.92□□□□□ -2.1
GABRR3-201ENST00000470589 KRTAP15-1Q3LI76 137 aa1.91□□□□□ -2.1
GABRR3-201ENST00000470589 TENM1Q9UKZ4 2725 aa1.91□□□□□ -2.1
GABRR3-201ENST00000470589 DMXL1Q9Y485 3027 aa1.91□□□□□ -2.1
GABRR3-201ENST00000470589 FREM2Q5SZK8 3169 aa1.91□□□□□ -2.1
GABRR3-201ENST00000470589 USP34Q70CQ2 3546 aa1.9□□□□□ -2.1
GABRR3-201ENST00000470589 REV3LO60673 3130 aa1.89□□□□□ -2.11
GABRR3-201ENST00000470589 DNAH14Q0VDD8 3507 aa1.89□□□□□ -2.11
GABRR3-201ENST00000470589 CRYBG3Q68DQ2 2970 aa1.88□□□□□ -2.11
GABRR3-201ENST00000470589 KRTAP4-7Q9BYR0 210 aa1.88□□□□□ -2.11
GABRR3-201ENST00000470589 INE1O15225 51 aa1.88□□□□□ -2.11
GABRR3-201ENST00000470589 KRTAP4-8A0A0G2JLE6 195 aa1.87□□□□□ -2.11
GABRR3-201ENST00000470589 TENM2Q9NT68 2774 aa1.87□□□□□ -2.11
GABRR3-201ENST00000470589 VWFP04275 2813 aa1.84□□□□□ -2.11
GABRR3-201ENST00000470589 SPTBN5Q9NRC6 3674 aaKnown RBP1.84□□□□□ -2.11
GABRR3-201ENST00000470589 LOC400499M0QZD8 3231 aa1.84□□□□□ -2.12
GABRR3-201ENST00000470589 CFAP47Q6ZTR5 3102 aa1.83□□□□□ -2.12
GABRR3-201ENST00000470589 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.83□□□□□ -2.12
GABRR3-201ENST00000470589 MT1HL1P0DM35 61 aa1.83□□□□□ -2.12
GABRR3-201ENST00000470589 ALMS1Q8TCU4 4167 aa1.83□□□□□ -2.12
GABRR3-201ENST00000470589 KRTAP10-4P60372 401 aaPredicted RBP1.83□□□□□ -2.12
GABRR3-201ENST00000470589 KRTAP9-2Q9BYQ4 174 aa1.83□□□□□ -2.12
GABRR3-201ENST00000470589 OTOGQ6ZRI0 2925 aa1.82□□□□□ -2.12
GABRR3-201ENST00000470589 ANK3Q12955 4377 aaKnown RBP1.81□□□□□ -2.12
GABRR3-201ENST00000470589 KRTAP4-2Q9BYR5 136 aa1.8□□□□□ -2.12
GABRR3-201ENST00000470589 PKD1L1Q8TDX9 2849 aa1.79□□□□□ -2.12
GABRR3-201ENST00000470589 MEGF8Q7Z7M0 2845 aa1.79□□□□□ -2.12
GABRR3-201ENST00000470589 KRTAP9-6A0A140TA67 174 aa1.78□□□□□ -2.12
GABRR3-201ENST00000470589 HUWE1Q7Z6Z7 4374 aaKnown RBP1.77□□□□□ -2.13
GABRR3-201ENST00000470589 MT3P25713 68 aa1.77□□□□□ -2.13
GABRR3-201ENST00000470589 KRTAP4-5Q9BYR2 181 aa1.77□□□□□ -2.13
GABRR3-201ENST00000470589 SPEGQ15772 3267 aa1.77□□□□□ -2.13
GABRR3-201ENST00000470589 KRTAP10-12P60413 245 aa1.77□□□□□ -2.13
GABRR3-201ENST00000470589 FBN3Q75N90 2809 aa1.76□□□□□ -2.13
GABRR3-201ENST00000470589 KRTAP9-9Q9BYP9 154 aa1.74□□□□□ -2.13
GABRR3-201ENST00000470589 KRTAP9-4Q9BYQ2 154 aa1.74□□□□□ -2.13
GABRR3-201ENST00000470589 KRTAP4-9Q9BYQ8 210 aa1.74□□□□□ -2.13
GABRR3-201ENST00000470589 FBN1P35555 2871 aaKnown RBP1.73□□□□□ -2.13
GABRR3-201ENST00000470589 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms