RNA–Protein interactions for RNA: ENST00000470589.1

GABRR3-201, Transcript of gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene), humanhuman

TSL 1 (best)

Gene GABRR3, Length 4,826 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR3-201ENST00000470589 CHIC1Q5VXU3 224 aa6.88□□□□□ -1.31
GABRR3-201ENST00000470589 NISCHQ9Y2I1 1504 aa6.88□□□□□ -1.31
GABRR3-201ENST00000470589 DCAF8L2P0C7V8 631 aa6.59□□□□□ -1.35
GABRR3-201ENST00000470589 SUPT5HO00267 1087 aaKnown RBP6.42□□□□□ -1.38
GABRR3-201ENST00000470589 AEBP2Q6ZN18 517 aaPredicted RBP6.38□□□□□ -1.39
GABRR3-201ENST00000470589 PELP1Q8IZL8 1130 aaKnown RBP6.37□□□□□ -1.39
GABRR3-201ENST00000470589 SHROOM4Q9ULL8 1493 aa6.28□□□□□ -1.4
GABRR3-201ENST00000470589 ZEB1P37275 1124 aaPredicted RBP6.27□□□□□ -1.41
GABRR3-201ENST00000470589 APLP2Q06481 763 aa6.22□□□□□ -1.41
GABRR3-201ENST00000470589 MYT1Q01538 1121 aa6.15□□□□□ -1.42
GABRR3-201ENST00000470589 CENPBP07199 599 aaPredicted RBP6.14□□□□□ -1.43
GABRR3-201ENST00000470589 FAM9AQ8IZU1 332 aaPredicted RBP6.14□□□□□ -1.43
GABRR3-201ENST00000470589 SLC24A1O60721 1099 aa6.08□□□□□ -1.44
GABRR3-201ENST00000470589 PCGF6Q9BYE7 350 aa6.08□□□□□ -1.44
GABRR3-201ENST00000470589 CCER1Q8TC90 406 aaPredicted RBP6.07□□□□□ -1.44
GABRR3-201ENST00000470589 TRIM41Q8WV44 630 aa6.07□□□□□ -1.44
GABRR3-201ENST00000470589 TRIM26Q12899 539 aaPredicted RBP6□□□□□ -1.45
GABRR3-201ENST00000470589 EHMT2Q96KQ7 1210 aa5.97□□□□□ -1.45
GABRR3-201ENST00000470589 HRCP23327 699 aa5.96□□□□□ -1.46
GABRR3-201ENST00000470589 ERICH6Q7L0X2 663 aa5.95□□□□□ -1.46
GABRR3-201ENST00000470589 NEFLP07196 543 aa5.94□□□□□ -1.46
GABRR3-201ENST00000470589 UBTFP17480 764 aaKnown RBP5.93□□□□□ -1.46
GABRR3-201ENST00000470589 PLPPR3Q6T4P5 718 aa5.93□□□□□ -1.46
GABRR3-201ENST00000470589 PHF23Q9BUL5 403 aaPredicted RBP5.91□□□□□ -1.46
GABRR3-201ENST00000470589 TTBK1Q5TCY1 1321 aaPredicted RBP5.82□□□□□ -1.48
GABRR3-201ENST00000470589 ATP1B4Q9UN42 357 aaPredicted RBP5.79□□□□□ -1.48
GABRR3-201ENST00000470589 CCDC180Q9P1Z9 1646 aa5.78□□□□□ -1.48
GABRR3-201ENST00000470589 RANGAP1P46060 587 aaPredicted RBP5.76□□□□□ -1.49
GABRR3-201ENST00000470589 YTHDC1Q96MU7 727 aaKnown RBP5.76□□□□□ -1.49
GABRR3-201ENST00000470589 CLSPNQ9HAW4 1339 aa5.74□□□□□ -1.49
GABRR3-201ENST00000470589 ZCCHC6Q5VYS8 1495 aaKnown RBP5.74□□□□□ -1.49
GABRR3-201ENST00000470589 DCAF1Q9Y4B6 1507 aa5.73□□□□□ -1.49
GABRR3-201ENST00000470589 DIEXFQ68CQ4 756 aaKnown RBP5.72□□□□□ -1.49
GABRR3-201ENST00000470589 DAXXQ9UER7 740 aaPredicted RBP5.72□□□□□ -1.49
GABRR3-201ENST00000470589 LOC105371045A0A1W2PR82 267 aa5.72□□□□□ -1.49
GABRR3-201ENST00000470589 HNRNPUL2Q1KMD3 747 aaKnown RBP5.67□□□□□ -1.5
GABRR3-201ENST00000470589 PPARGC1BQ86YN6 1023 aaKnown RBP5.65□□□□□ -1.5
GABRR3-201ENST00000470589 SENP3Q9H4L4 574 aaPredicted RBP5.65□□□□□ -1.5
GABRR3-201ENST00000470589 ZNF316A6NFI3 1004 aaPredicted RBP5.64□□□□□ -1.51
GABRR3-201ENST00000470589 RTL5Q5HYW3 569 aaPredicted RBP5.63□□□□□ -1.51
GABRR3-201ENST00000470589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.63□□□□□ -1.51
GABRR3-201ENST00000470589 ITGAEP38570 1179 aa5.62□□□□□ -1.51
GABRR3-201ENST00000470589 ABCC9O60706 1549 aa5.62□□□□□ -1.51
GABRR3-201ENST00000470589 ANP32CO43423 234 aa5.62□□□□□ -1.51
GABRR3-201ENST00000470589 CSRNP3Q8WYN3 585 aa5.62□□□□□ -1.51
GABRR3-201ENST00000470589 EEA1Q15075 1411 aa5.61□□□□□ -1.51
GABRR3-201ENST00000470589 ACIN1Q9UKV3 1341 aaKnown RBP5.61□□□□□ -1.51
GABRR3-201ENST00000470589 MYT1LQ9UL68 1186 aa5.59□□□□□ -1.52
GABRR3-201ENST00000470589 FAM50AQ14320 339 aaKnown RBP5.58□□□□□ -1.52
GABRR3-201ENST00000470589 CDK11AQ9UQ88 783 aaPredicted RBP5.58□□□□□ -1.52
GABRR3-201ENST00000470589 SLC4A1APQ9BWU0 796 aaKnown RBP5.57□□□□□ -1.52
GABRR3-201ENST00000470589 GTF3C3Q9Y5Q9 886 aa5.57□□□□□ -1.52
GABRR3-201ENST00000470589 KCNA4P22459 653 aa5.56□□□□□ -1.52
GABRR3-201ENST00000470589 SCRIBQ14160 1630 aa5.56□□□□□ -1.52
GABRR3-201ENST00000470589 POLR3GLQ9BT43 218 aa5.55□□□□□ -1.52
GABRR3-201ENST00000470589 AMER1Q5JTC6 1135 aaPredicted RBP5.55□□□□□ -1.52
GABRR3-201ENST00000470589 TRIM52Q96A61 297 aa5.54□□□□□ -1.52
GABRR3-201ENST00000470589 NACADO15069 1562 aa5.54□□□□□ -1.52
GABRR3-201ENST00000470589 RB1CC1Q8TDY2 1594 aa5.53□□□□□ -1.52
GABRR3-201ENST00000470589 NEUROD1Q13562 356 aa5.5□□□□□ -1.53
GABRR3-201ENST00000470589 GOLGA3Q08378 1498 aa5.5□□□□□ -1.53
GABRR3-201ENST00000470589 ANP32AP39687 249 aaKnown RBP5.49□□□□□ -1.53
GABRR3-201ENST00000470589 TONSLQ96HA7 1378 aa5.49□□□□□ -1.53
GABRR3-201ENST00000470589 PABPN1Q86U42 306 aaKnown RBP eCLIP5.49□□□□□ -1.53
GABRR3-201ENST00000470589 ZBTB47Q9UFB7 747 aaPredicted RBP5.48□□□□□ -1.53
GABRR3-201ENST00000470589 PRKCSHP14314 528 aaPredicted RBP5.47□□□□□ -1.53
GABRR3-201ENST00000470589 NCBP3Q53F19 620 aaKnown RBP5.47□□□□□ -1.53
GABRR3-201ENST00000470589 RSF1Q96T23 1441 aaPredicted RBP5.47□□□□□ -1.53
GABRR3-201ENST00000470589 NEFMP07197 916 aa5.46□□□□□ -1.54
GABRR3-201ENST00000470589 CLIP1P30622 1438 aa5.46□□□□□ -1.54
GABRR3-201ENST00000470589 CEP164Q9UPV0 1460 aa5.46□□□□□ -1.54
GABRR3-201ENST00000470589 TNIKQ9UKE5 1360 aa5.46□□□□□ -1.54
GABRR3-201ENST00000470589 BAZ1AQ9NRL2 1556 aaPredicted RBP5.45□□□□□ -1.54
GABRR3-201ENST00000470589 CEP162Q5TB80 1403 aa5.43□□□□□ -1.54
GABRR3-201ENST00000470589 MYO15BQ96JP2 1530 aa5.43□□□□□ -1.54
GABRR3-201ENST00000470589 CANXP27824 592 aaKnown RBP5.43□□□□□ -1.54
GABRR3-201ENST00000470589 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.42□□□□□ -1.54
GABRR3-201ENST00000470589 WRNQ14191 1432 aaPredicted RBP eCLIP5.41□□□□□ -1.54
GABRR3-201ENST00000470589 TIMELESSQ9UNS1 1208 aa5.41□□□□□ -1.54
GABRR3-201ENST00000470589 BCANQ96GW7 911 aa5.41□□□□□ -1.54
GABRR3-201ENST00000470589 UPF2Q9HAU5 1272 aaKnown RBP5.41□□□□□ -1.54
GABRR3-201ENST00000470589 MTUS2Q5JR59 1369 aa5.4□□□□□ -1.54
GABRR3-201ENST00000470589 ZNF326Q5BKZ1 582 aaKnown RBP5.4□□□□□ -1.54
GABRR3-201ENST00000470589 KIF27Q86VH2 1401 aa5.4□□□□□ -1.54
GABRR3-201ENST00000470589 ANP32BQ92688 251 aaKnown RBP5.4□□□□□ -1.55
GABRR3-201ENST00000470589 EIF5BO60841 1220 aaKnown RBP5.39□□□□□ -1.55
GABRR3-201ENST00000470589 FKBP8Q14318 412 aa5.39□□□□□ -1.55
GABRR3-201ENST00000470589 CNGB1Q14028 1251 aaPredicted RBP5.39□□□□□ -1.55
GABRR3-201ENST00000470589 BAZ1BQ9UIG0 1483 aaKnown RBP5.38□□□□□ -1.55
GABRR3-201ENST00000470589 HNRNPUQ00839 825 aaKnown RBP eCLIP5.38□□□□□ -1.55
GABRR3-201ENST00000470589 FHAD1B1AJZ9 1412 aa5.38□□□□□ -1.55
GABRR3-201ENST00000470589 ANP32EQ9BTT0 268 aa5.37□□□□□ -1.55
GABRR3-201ENST00000470589 EIF4G2P78344 907 aaKnown RBP eCLIP5.37□□□□□ -1.55
GABRR3-201ENST00000470589 RTN4Q9NQC3 1192 aaKnown RBP5.36□□□□□ -1.55
GABRR3-201ENST00000470589 DDRGK1Q96HY6 314 aa5.36□□□□□ -1.55
GABRR3-201ENST00000470589 DDX10Q13206 875 aaKnown RBP5.36□□□□□ -1.55
GABRR3-201ENST00000470589 GLIPR1L2Q4G1C9 344 aa5.36□□□□□ -1.55
GABRR3-201ENST00000470589 TMC1Q8TDI8 760 aa5.36□□□□□ -1.55
GABRR3-201ENST00000470589 TSPY4P0CV99 314 aa5.35□□□□□ -1.55
GABRR3-201ENST00000470589 TSPY10P0CW01 314 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms