RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 TENM4Q6N022 2769 aa4.29□□□□□ -1.72
MCF2L2-205ENST00000461074 XIRP2A4UGR9 3374 aa4.24□□□□□ -1.73
MCF2L2-205ENST00000461074 CDH23Q9H251 3354 aa4.24□□□□□ -1.73
MCF2L2-205ENST00000461074 LAMA2P24043 3122 aaKnown RBP4.22□□□□□ -1.73
MCF2L2-205ENST00000461074 A0A0C4DFX4 3053 aa4.22□□□□□ -1.73
MCF2L2-205ENST00000461074 FRYQ5TBA9 3013 aa4.2□□□□□ -1.74
MCF2L2-205ENST00000461074 LRBAP50851 2863 aa4.2□□□□□ -1.74
MCF2L2-205ENST00000461074 CFAP54Q96N23 3096 aa4.2□□□□□ -1.74
MCF2L2-205ENST00000461074 KRTAP13-4Q3LI77 160 aa4.19□□□□□ -1.74
MCF2L2-205ENST00000461074 LAMA1P25391 3075 aa4.19□□□□□ -1.74
MCF2L2-205ENST00000461074 UNC80Q8N2C7 3258 aa4.18□□□□□ -1.74
MCF2L2-205ENST00000461074 SZT2Q5T011 3432 aa4.13□□□□□ -1.75
MCF2L2-205ENST00000461074 WDFY4Q6ZS81 3184 aa4.13□□□□□ -1.75
MCF2L2-205ENST00000461074 TENM1Q9UKZ4 2725 aa4.12□□□□□ -1.75
MCF2L2-205ENST00000461074 TRIOO75962 3097 aa4.1□□□□□ -1.75
MCF2L2-205ENST00000461074 TENM3Q9P273 2699 aa4.09□□□□□ -1.75
MCF2L2-205ENST00000461074 CELSR3Q9NYQ7 3312 aa4.09□□□□□ -1.76
MCF2L2-205ENST00000461074 DNAH14Q0VDD8 3507 aa4.08□□□□□ -1.76
MCF2L2-205ENST00000461074 COL6A3P12111 3177 aa4.07□□□□□ -1.76
MCF2L2-205ENST00000461074 KALRNO60229 2985 aa4.05□□□□□ -1.76
MCF2L2-205ENST00000461074 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
MCF2L2-205ENST00000461074 CELSR2Q9HCU4 2923 aa4.05□□□□□ -1.76
MCF2L2-205ENST00000461074 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
MCF2L2-205ENST00000461074 VPS13AQ96RL7 3174 aa4.05□□□□□ -1.76
MCF2L2-205ENST00000461074 TACC2O95359 2948 aa4.04□□□□□ -1.76
MCF2L2-205ENST00000461074 COL12A1Q99715 3063 aa4.04□□□□□ -1.76
MCF2L2-205ENST00000461074 TGP01266 2768 aa4.03□□□□□ -1.76
MCF2L2-205ENST00000461074 DCHS2Q6V1P9 2916 aa4.03□□□□□ -1.76
MCF2L2-205ENST00000461074 ATMQ13315 3056 aa4.03□□□□□ -1.76
MCF2L2-205ENST00000461074 FRYLO94915 3013 aa4.02□□□□□ -1.77
MCF2L2-205ENST00000461074 VCANP13611 3396 aa4.01□□□□□ -1.77
MCF2L2-205ENST00000461074 SPTBN5Q9NRC6 3674 aaKnown RBP4.01□□□□□ -1.77
MCF2L2-205ENST00000461074 ZZEF1O43149 2961 aa4.01□□□□□ -1.77
MCF2L2-205ENST00000461074 NF1P21359 2839 aa4.01□□□□□ -1.77
MCF2L2-205ENST00000461074 HRNRQ86YZ3 2850 aaPredicted RBP3.99□□□□□ -1.77
MCF2L2-205ENST00000461074 EYSQ5T1H1 3165 aa3.99□□□□□ -1.77
MCF2L2-205ENST00000461074 TNRC18O15417 2968 aaPredicted RBP3.98□□□□□ -1.77
MCF2L2-205ENST00000461074 CRYBG3Q68DQ2 2970 aa3.98□□□□□ -1.77
MCF2L2-205ENST00000461074 TENM2Q9NT68 2774 aa3.97□□□□□ -1.77
MCF2L2-205ENST00000461074 MXRA5Q9NR99 2828 aa3.97□□□□□ -1.77
MCF2L2-205ENST00000461074 ZANQ9Y493 2812 aa3.97□□□□□ -1.77
MCF2L2-205ENST00000461074 NBEAQ8NFP9 2946 aa3.97□□□□□ -1.77
MCF2L2-205ENST00000461074 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
MCF2L2-205ENST00000461074 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
MCF2L2-205ENST00000461074 ASH1LQ9NR48 2969 aaKnown RBP3.95□□□□□ -1.78
MCF2L2-205ENST00000461074 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
MCF2L2-205ENST00000461074 ADGRG4Q8IZF6 3080 aa3.92□□□□□ -1.78
MCF2L2-205ENST00000461074 INE1O15225 51 aa3.91□□□□□ -1.78
MCF2L2-205ENST00000461074 USP34Q70CQ2 3546 aa3.91□□□□□ -1.78
MCF2L2-205ENST00000461074 DMXL2Q8TDJ6 3036 aa3.91□□□□□ -1.78
MCF2L2-205ENST00000461074 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
MCF2L2-205ENST00000461074 BOD1L1Q8NFC6 3051 aa3.89□□□□□ -1.79
MCF2L2-205ENST00000461074 REV3LO60673 3130 aa3.87□□□□□ -1.79
MCF2L2-205ENST00000461074 SPEGQ15772 3267 aa3.87□□□□□ -1.79
MCF2L2-205ENST00000461074 MT1HL1P0DM35 61 aa3.86□□□□□ -1.79
MCF2L2-205ENST00000461074 CELSR1Q9NYQ6 3014 aa3.86□□□□□ -1.79
MCF2L2-205ENST00000461074 MYO15AQ9UKN7 3530 aa3.84□□□□□ -1.79
MCF2L2-205ENST00000461074 DMXL1Q9Y485 3027 aa3.83□□□□□ -1.8
MCF2L2-205ENST00000461074 FREM2Q5SZK8 3169 aa3.83□□□□□ -1.8
MCF2L2-205ENST00000461074 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
MCF2L2-205ENST00000461074 PDZD2O15018 2839 aa3.82□□□□□ -1.8
MCF2L2-205ENST00000461074 CFAP47Q6ZTR5 3102 aa3.82□□□□□ -1.8
MCF2L2-205ENST00000461074 FBN2P35556 2912 aa3.81□□□□□ -1.8
MCF2L2-205ENST00000461074 KRTAP10-4P60372 401 aaPredicted RBP3.75□□□□□ -1.81
MCF2L2-205ENST00000461074 KRTAP3-2Q9BYR7 98 aa3.74□□□□□ -1.81
MCF2L2-205ENST00000461074 LOC400499M0QZD8 3231 aa3.73□□□□□ -1.81
MCF2L2-205ENST00000461074 PKD1L1Q8TDX9 2849 aa3.72□□□□□ -1.81
MCF2L2-205ENST00000461074 KRTAP3-3Q9BYR6 98 aa3.72□□□□□ -1.81
MCF2L2-205ENST00000461074 WDFY3Q8IZQ1 3526 aa3.71□□□□□ -1.82
MCF2L2-205ENST00000461074 ASPMQ8IZT6 3477 aa3.7□□□□□ -1.82
MCF2L2-205ENST00000461074 ALMS1Q8TCU4 4167 aa3.69□□□□□ -1.82
MCF2L2-205ENST00000461074 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
MCF2L2-205ENST00000461074 HUWE1Q7Z6Z7 4374 aaKnown RBP3.67□□□□□ -1.82
MCF2L2-205ENST00000461074 VWFP04275 2813 aa3.66□□□□□ -1.82
MCF2L2-205ENST00000461074 LAMA5O15230 3695 aa3.65□□□□□ -1.83
MCF2L2-205ENST00000461074 DMDP11532 3685 aa3.65□□□□□ -1.83
MCF2L2-205ENST00000461074 NBPF19A0A087WUL8 3843 aa3.63□□□□□ -1.83
MCF2L2-205ENST00000461074 FBN3Q75N90 2809 aa3.62□□□□□ -1.83
MCF2L2-205ENST00000461074 RELNP78509 3460 aa3.62□□□□□ -1.83
MCF2L2-205ENST00000461074 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
MCF2L2-205ENST00000461074 OTOGQ6ZRI0 2925 aa3.62□□□□□ -1.83
MCF2L2-205ENST00000461074 MUC3AQ02505 3323 aa3.58□□□□□ -1.84
MCF2L2-205ENST00000461074 MEGF8Q7Z7M0 2845 aa3.58□□□□□ -1.84
MCF2L2-205ENST00000461074 ANK3Q12955 4377 aaKnown RBP3.55□□□□□ -1.84
MCF2L2-205ENST00000461074 ZFHX4Q86UP3 3567 aa3.55□□□□□ -1.84
MCF2L2-205ENST00000461074 DCHS1Q96JQ0 3298 aa3.54□□□□□ -1.84
MCF2L2-205ENST00000461074 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
MCF2L2-205ENST00000461074 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
MCF2L2-205ENST00000461074 KRTAP4-5Q9BYR2 181 aa3.51□□□□□ -1.85
MCF2L2-205ENST00000461074 COL7A1Q02388 2944 aa3.48□□□□□ -1.85
MCF2L2-205ENST00000461074 ZFHX3Q15911 3703 aa3.47□□□□□ -1.85
MCF2L2-205ENST00000461074 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
MCF2L2-205ENST00000461074 SMG1Q96Q15 3661 aaKnown RBP3.45□□□□□ -1.86
MCF2L2-205ENST00000461074 DNAH1Q9P2D7 4330 aa3.45□□□□□ -1.86
MCF2L2-205ENST00000461074 FBN1P35555 2871 aaKnown RBP3.44□□□□□ -1.86
MCF2L2-205ENST00000461074 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
MCF2L2-205ENST00000461074 SRRM2Q9UQ35 2752 aaKnown RBP3.43□□□□□ -1.86
MCF2L2-205ENST00000461074 CSMD1Q96PZ7 3565 aa3.43□□□□□ -1.86
MCF2L2-205ENST00000461074 SPENQ96T58 3664 aaKnown RBP3.41□□□□□ -1.86
MCF2L2-205ENST00000461074 DNAH2Q9P225 4427 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms