RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 DCAF8L2P0C7V8 631 aa14.25□□□□□ -0.13
MCF2L2-205ENST00000461074 NISCHQ9Y2I1 1504 aa14.05□□□□□ -0.16
MCF2L2-205ENST00000461074 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
MCF2L2-205ENST00000461074 PELP1Q8IZL8 1130 aaKnown RBP13.45□□□□□ -0.26
MCF2L2-205ENST00000461074 SUPT5HO00267 1087 aaKnown RBP13.44□□□□□ -0.26
MCF2L2-205ENST00000461074 APLP2Q06481 763 aa13.31□□□□□ -0.28
MCF2L2-205ENST00000461074 SHROOM4Q9ULL8 1493 aa13.13□□□□□ -0.31
MCF2L2-205ENST00000461074 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
MCF2L2-205ENST00000461074 CCER1Q8TC90 406 aaPredicted RBP12.83□□□□□ -0.36
MCF2L2-205ENST00000461074 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
MCF2L2-205ENST00000461074 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
MCF2L2-205ENST00000461074 EHMT2Q96KQ7 1210 aa12.68□□□□□ -0.38
MCF2L2-205ENST00000461074 UBTFP17480 764 aaKnown RBP12.56□□□□□ -0.4
MCF2L2-205ENST00000461074 ERICH6Q7L0X2 663 aa12.56□□□□□ -0.4
MCF2L2-205ENST00000461074 NEFLP07196 543 aa12.51□□□□□ -0.41
MCF2L2-205ENST00000461074 ATP1B4Q9UN42 357 aaPredicted RBP12.5□□□□□ -0.41
MCF2L2-205ENST00000461074 PCGF6Q9BYE7 350 aa12.48□□□□□ -0.41
MCF2L2-205ENST00000461074 MYT1Q01538 1121 aa12.44□□□□□ -0.42
MCF2L2-205ENST00000461074 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
MCF2L2-205ENST00000461074 TTBK1Q5TCY1 1321 aaPredicted RBP12.33□□□□□ -0.44
MCF2L2-205ENST00000461074 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
MCF2L2-205ENST00000461074 MYT1LQ9UL68 1186 aa12.2□□□□□ -0.46
MCF2L2-205ENST00000461074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
MCF2L2-205ENST00000461074 HNRNPUL2Q1KMD3 747 aaKnown RBP12.18□□□□□ -0.46
MCF2L2-205ENST00000461074 DAXXQ9UER7 740 aaPredicted RBP12.17□□□□□ -0.46
MCF2L2-205ENST00000461074 YTHDC1Q96MU7 727 aaKnown RBP12.16□□□□□ -0.46
MCF2L2-205ENST00000461074 CHIC1Q5VXU3 224 aa11.96□□□□□ -0.49
MCF2L2-205ENST00000461074 ABCC9O60706 1549 aa11.93□□□□□ -0.5
MCF2L2-205ENST00000461074 ITGAEP38570 1179 aa11.93□□□□□ -0.5
MCF2L2-205ENST00000461074 HRCP23327 699 aa11.91□□□□□ -0.5
MCF2L2-205ENST00000461074 POLR3GLQ9BT43 218 aa11.91□□□□□ -0.5
MCF2L2-205ENST00000461074 CDK11AQ9UQ88 783 aaPredicted RBP11.84□□□□□ -0.51
MCF2L2-205ENST00000461074 CCDC180Q9P1Z9 1646 aa11.84□□□□□ -0.51
MCF2L2-205ENST00000461074 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
MCF2L2-205ENST00000461074 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
MCF2L2-205ENST00000461074 FAM50AQ14320 339 aaKnown RBP11.83□□□□□ -0.52
MCF2L2-205ENST00000461074 TRIM52Q96A61 297 aa11.81□□□□□ -0.52
MCF2L2-205ENST00000461074 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
MCF2L2-205ENST00000461074 NEFMP07197 916 aa11.8□□□□□ -0.52
MCF2L2-205ENST00000461074 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
MCF2L2-205ENST00000461074 CLSPNQ9HAW4 1339 aa11.79□□□□□ -0.52
MCF2L2-205ENST00000461074 ACIN1Q9UKV3 1341 aaKnown RBP11.78□□□□□ -0.52
MCF2L2-205ENST00000461074 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
MCF2L2-205ENST00000461074 ANP32CO43423 234 aa11.74□□□□□ -0.53
MCF2L2-205ENST00000461074 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
MCF2L2-205ENST00000461074 DIEXFQ68CQ4 756 aaKnown RBP11.71□□□□□ -0.53
MCF2L2-205ENST00000461074 LOC105371045A0A1W2PR82 267 aa11.7□□□□□ -0.54
MCF2L2-205ENST00000461074 CSRNP3Q8WYN3 585 aa11.66□□□□□ -0.54
MCF2L2-205ENST00000461074 ESF1Q9H501 851 aaKnown RBP11.64□□□□□ -0.55
MCF2L2-205ENST00000461074 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
MCF2L2-205ENST00000461074 FBLN2P98095 1184 aa11.63□□□□□ -0.55
MCF2L2-205ENST00000461074 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
MCF2L2-205ENST00000461074 RB1CC1Q8TDY2 1594 aa11.6□□□□□ -0.55
MCF2L2-205ENST00000461074 SCRIBQ14160 1630 aa11.6□□□□□ -0.55
MCF2L2-205ENST00000461074 CANXP27824 592 aaKnown RBP11.59□□□□□ -0.55
MCF2L2-205ENST00000461074 NEUROD1Q13562 356 aa11.58□□□□□ -0.56
MCF2L2-205ENST00000461074 BCANQ96GW7 911 aa11.54□□□□□ -0.56
MCF2L2-205ENST00000461074 EEA1Q15075 1411 aa11.53□□□□□ -0.56
MCF2L2-205ENST00000461074 ZNF326Q5BKZ1 582 aaKnown RBP11.52□□□□□ -0.56
MCF2L2-205ENST00000461074 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
MCF2L2-205ENST00000461074 TONSLQ96HA7 1378 aa11.5□□□□□ -0.57
MCF2L2-205ENST00000461074 NACADO15069 1562 aa11.5□□□□□ -0.57
MCF2L2-205ENST00000461074 DCAF1Q9Y4B6 1507 aa11.47□□□□□ -0.57
MCF2L2-205ENST00000461074 STAG3Q9UJ98 1225 aa11.47□□□□□ -0.57
MCF2L2-205ENST00000461074 ANP32AP39687 249 aaKnown RBP11.45□□□□□ -0.58
MCF2L2-205ENST00000461074 RSF1Q96T23 1441 aaPredicted RBP11.45□□□□□ -0.58
MCF2L2-205ENST00000461074 UPF2Q9HAU5 1272 aaKnown RBP11.43□□□□□ -0.58
MCF2L2-205ENST00000461074 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.43□□□□□ -0.58
MCF2L2-205ENST00000461074 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
MCF2L2-205ENST00000461074 ANP32BQ92688 251 aaKnown RBP11.42□□□□□ -0.58
MCF2L2-205ENST00000461074 TSPY4P0CV99 314 aa11.42□□□□□ -0.58
MCF2L2-205ENST00000461074 TSPY10P0CW01 314 aa11.42□□□□□ -0.58
MCF2L2-205ENST00000461074 EIF5BO60841 1220 aaKnown RBP11.41□□□□□ -0.58
MCF2L2-205ENST00000461074 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
MCF2L2-205ENST00000461074 MTUS2Q5JR59 1369 aa11.37□□□□□ -0.59
MCF2L2-205ENST00000461074 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
MCF2L2-205ENST00000461074 CHMP7Q8WUX9 453 aaPredicted RBP11.34□□□□□ -0.59
MCF2L2-205ENST00000461074 CDCA8Q53HL2 280 aa11.32□□□□□ -0.6
MCF2L2-205ENST00000461074 GOLGA3Q08378 1498 aa11.32□□□□□ -0.6
MCF2L2-205ENST00000461074 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
MCF2L2-205ENST00000461074 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
MCF2L2-205ENST00000461074 WDR43Q15061 677 aaKnown RBP eCLIP11.29□□□□□ -0.6
MCF2L2-205ENST00000461074 CLIP1P30622 1438 aa11.29□□□□□ -0.6
MCF2L2-205ENST00000461074 BAZ1BQ9UIG0 1483 aaKnown RBP11.28□□□□□ -0.6
MCF2L2-205ENST00000461074 KIF27Q86VH2 1401 aa11.27□□□□□ -0.61
MCF2L2-205ENST00000461074 MYH16Q9H6N6 1097 aa11.27□□□□□ -0.61
MCF2L2-205ENST00000461074 GTF3C3Q9Y5Q9 886 aa11.26□□□□□ -0.61
MCF2L2-205ENST00000461074 PLEKHD1A6NEE1 506 aa11.25□□□□□ -0.61
MCF2L2-205ENST00000461074 TMC1Q8TDI8 760 aa11.25□□□□□ -0.61
MCF2L2-205ENST00000461074 BAZ1AQ9NRL2 1556 aaPredicted RBP11.24□□□□□ -0.61
MCF2L2-205ENST00000461074 NPM2Q86SE8 214 aaKnown RBP11.24□□□□□ -0.61
MCF2L2-205ENST00000461074 CEP164Q9UPV0 1460 aa11.23□□□□□ -0.61
MCF2L2-205ENST00000461074 ANP32EQ9BTT0 268 aa11.23□□□□□ -0.61
MCF2L2-205ENST00000461074 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
MCF2L2-205ENST00000461074 CHMP4BQ9H444 224 aaKnown RBP11.2□□□□□ -0.62
MCF2L2-205ENST00000461074 CFAP53Q96M91 514 aa11.2□□□□□ -0.62
MCF2L2-205ENST00000461074 WRNQ14191 1432 aaPredicted RBP eCLIP11.2□□□□□ -0.62
MCF2L2-205ENST00000461074 EIF4G2P78344 907 aaKnown RBP eCLIP11.2□□□□□ -0.62
MCF2L2-205ENST00000461074 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
MCF2L2-205ENST00000461074 HNRNPUQ00839 825 aaKnown RBP eCLIP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms