RNA–Protein interactions for RNA: ENST00000447393.5

PACS2-203, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 1 (best) BASIC

Gene PACS2, Length 6,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-203ENST00000447393 APCP25054 2843 aa9.61□□□□□ -0.87
PACS2-203ENST00000447393 CDH23Q9H251 3354 aa9.6□□□□□ -0.87
PACS2-203ENST00000447393 COL12A1Q99715 3063 aa9.6□□□□□ -0.87
PACS2-203ENST00000447393 ASH1LQ9NR48 2969 aaKnown RBP9.59□□□□□ -0.87
PACS2-203ENST00000447393 FLNCQ14315 2725 aa9.59□□□□□ -0.88
PACS2-203ENST00000447393 KRTAP16-1A8MUX0 517 aa9.53□□□□□ -0.88
PACS2-203ENST00000447393 LAMA1P25391 3075 aa9.53□□□□□ -0.88
PACS2-203ENST00000447393 A0A1B0GVY2 172 aa9.53□□□□□ -0.88
PACS2-203ENST00000447393 FRYLO94915 3013 aa9.49□□□□□ -0.89
PACS2-203ENST00000447393 C10orf95Q9H7T3 257 aa9.49□□□□□ -0.89
PACS2-203ENST00000447393 XP32Q5T750 250 aa9.49□□□□□ -0.89
PACS2-203ENST00000447393 KRTAP10-8P60410 259 aa9.47□□□□□ -0.89
PACS2-203ENST00000447393 NDUFAF8A1L188 74 aa9.46□□□□□ -0.89
PACS2-203ENST00000447393 LRBAP50851 2863 aa9.46□□□□□ -0.89
PACS2-203ENST00000447393 KRTAP1-4P0C5Y4 121 aa9.44□□□□□ -0.9
PACS2-203ENST00000447393 BOD1L1Q8NFC6 3051 aa9.41□□□□□ -0.9
PACS2-203ENST00000447393 ADGRG4Q8IZF6 3080 aa9.4□□□□□ -0.9
PACS2-203ENST00000447393 CELSR2Q9HCU4 2923 aa9.4□□□□□ -0.9
PACS2-203ENST00000447393 VCANP13611 3396 aa9.37□□□□□ -0.91
PACS2-203ENST00000447393 NIPBLQ6KC79 2804 aaeCLIP9.37□□□□□ -0.91
PACS2-203ENST00000447393 CFAP47Q6ZTR5 3102 aa9.36□□□□□ -0.91
PACS2-203ENST00000447393 SZT2Q5T011 3432 aa9.36□□□□□ -0.91
PACS2-203ENST00000447393 COL6A3P12111 3177 aa9.35□□□□□ -0.91
PACS2-203ENST00000447393 NBEAQ8NFP9 2946 aa9.3□□□□□ -0.92
PACS2-203ENST00000447393 KRTAP10-10P60014 251 aa9.29□□□□□ -0.92
PACS2-203ENST00000447393 ZZEF1O43149 2961 aa9.28□□□□□ -0.92
PACS2-203ENST00000447393 DCHS2Q6V1P9 2916 aa9.28□□□□□ -0.92
PACS2-203ENST00000447393 TPRXLQ17RH7 258 aa9.27□□□□□ -0.93
PACS2-203ENST00000447393 DNAH14Q0VDD8 3507 aa9.26□□□□□ -0.93
PACS2-203ENST00000447393 EYSQ5T1H1 3165 aa9.24□□□□□ -0.93
PACS2-203ENST00000447393 PP632Q6XCG6 107 aa9.23□□□□□ -0.93
PACS2-203ENST00000447393 TENM3Q9P273 2699 aa9.16□□□□□ -0.94
PACS2-203ENST00000447393 H0YAA0 97 aa9.14□□□□□ -0.95
PACS2-203ENST00000447393 TENM1Q9UKZ4 2725 aa9.13□□□□□ -0.95
PACS2-203ENST00000447393 KRTAP13-3Q3SY46 172 aa9.11□□□□□ -0.95
PACS2-203ENST00000447393 PRO2289Q9P1D8 64 aa9.09□□□□□ -0.95
PACS2-203ENST00000447393 SPEGQ15772 3267 aa9.08□□□□□ -0.96
PACS2-203ENST00000447393 ZANQ9Y493 2812 aa9.08□□□□□ -0.96
PACS2-203ENST00000447393 TENM2Q9NT68 2774 aa9.06□□□□□ -0.96
PACS2-203ENST00000447393 P0C880 135 aa9.04□□□□□ -0.96
PACS2-203ENST00000447393 NF1P21359 2839 aa9.02□□□□□ -0.97
PACS2-203ENST00000447393 USP34Q70CQ2 3546 aa8.96□□□□□ -0.97
PACS2-203ENST00000447393 FBN2P35556 2912 aa8.9□□□□□ -0.99
PACS2-203ENST00000447393 TNRC18O15417 2968 aaPredicted RBP8.89□□□□□ -0.99
PACS2-203ENST00000447393 DMXL1Q9Y485 3027 aa8.86□□□□□ -0.99
PACS2-203ENST00000447393 HRNRQ86YZ3 2850 aaPredicted RBP8.83□□□□□ -1
PACS2-203ENST00000447393 PKD1L1Q8TDX9 2849 aa8.82□□□□□ -1
PACS2-203ENST00000447393 CELSR1Q9NYQ6 3014 aa8.81□□□□□ -1
PACS2-203ENST00000447393 TGP01266 2768 aa8.8□□□□□ -1
PACS2-203ENST00000447393 SPTBN5Q9NRC6 3674 aaKnown RBP8.8□□□□□ -1
PACS2-203ENST00000447393 VWFP04275 2813 aa8.69□□□□□ -1.02
PACS2-203ENST00000447393 KRTAP12-2P59991 146 aa8.67□□□□□ -1.02
PACS2-203ENST00000447393 LOC400499M0QZD8 3231 aa8.65□□□□□ -1.02
PACS2-203ENST00000447393 MYO15AQ9UKN7 3530 aa8.65□□□□□ -1.02
PACS2-203ENST00000447393 PDZD2O15018 2839 aa8.64□□□□□ -1.03
PACS2-203ENST00000447393 MXRA5Q9NR99 2828 aa8.64□□□□□ -1.03
PACS2-203ENST00000447393 KRTAP13-4Q3LI77 160 aa8.52□□□□□ -1.05
PACS2-203ENST00000447393 DCHS1Q96JQ0 3298 aa8.48□□□□□ -1.05
PACS2-203ENST00000447393 WDFY3Q8IZQ1 3526 aa8.47□□□□□ -1.05
PACS2-203ENST00000447393 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
PACS2-203ENST00000447393 RELNP78509 3460 aa8.42□□□□□ -1.06
PACS2-203ENST00000447393 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.06
PACS2-203ENST00000447393 ASPMQ8IZT6 3477 aa8.39□□□□□ -1.07
PACS2-203ENST00000447393 SRRM2Q9UQ35 2752 aaKnown RBP8.34□□□□□ -1.07
PACS2-203ENST00000447393 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
PACS2-203ENST00000447393 NBPF19A0A087WUL8 3843 aa8.3□□□□□ -1.08
PACS2-203ENST00000447393 FBN1P35555 2871 aaKnown RBP8.23□□□□□ -1.09
PACS2-203ENST00000447393 ZFHX4Q86UP3 3567 aa8.21□□□□□ -1.1
PACS2-203ENST00000447393 KRTAP10-6P60371 365 aaPredicted RBP8.15□□□□□ -1.11
PACS2-203ENST00000447393 ZFHX3Q15911 3703 aa8.13□□□□□ -1.11
PACS2-203ENST00000447393 MT1HL1P0DM35 61 aa8.09□□□□□ -1.11
PACS2-203ENST00000447393 FBN3Q75N90 2809 aa8.08□□□□□ -1.12
PACS2-203ENST00000447393 OTOGQ6ZRI0 2925 aa8.06□□□□□ -1.12
PACS2-203ENST00000447393 LAMA5O15230 3695 aa8.03□□□□□ -1.12
PACS2-203ENST00000447393 CRCT1Q9UGL9 99 aa8.02□□□□□ -1.13
PACS2-203ENST00000447393 MEGF8Q7Z7M0 2845 aa8□□□□□ -1.13
PACS2-203ENST00000447393 COL7A1Q02388 2944 aa7.95□□□□□ -1.14
PACS2-203ENST00000447393 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
PACS2-203ENST00000447393 CSMD1Q96PZ7 3565 aa7.94□□□□□ -1.14
PACS2-203ENST00000447393 KRTAP10-12P60413 245 aa7.93□□□□□ -1.14
PACS2-203ENST00000447393 DMDP11532 3685 aa7.89□□□□□ -1.15
PACS2-203ENST00000447393 ANK3Q12955 4377 aaKnown RBP7.89□□□□□ -1.15
PACS2-203ENST00000447393 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
PACS2-203ENST00000447393 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
PACS2-203ENST00000447393 CUBNO60494 3623 aa7.77□□□□□ -1.17
PACS2-203ENST00000447393 CSMD2Q7Z408 3487 aa7.75□□□□□ -1.17
PACS2-203ENST00000447393 MUC3AQ02505 3323 aa7.75□□□□□ -1.17
PACS2-203ENST00000447393 KRTAP10-4P60372 401 aaPredicted RBP7.75□□□□□ -1.17
PACS2-203ENST00000447393 SMG1Q96Q15 3661 aaKnown RBP7.7□□□□□ -1.18
PACS2-203ENST00000447393 TRRAPQ9Y4A5 3859 aa7.69□□□□□ -1.18
PACS2-203ENST00000447393 KRTAP12-3P60328 96 aa7.68□□□□□ -1.18
PACS2-203ENST00000447393 SVEP1Q4LDE5 3571 aa7.63□□□□□ -1.19
PACS2-203ENST00000447393 INE1O15225 51 aa7.6□□□□□ -1.19
PACS2-203ENST00000447393 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
PACS2-203ENST00000447393 HUWE1Q7Z6Z7 4374 aaKnown RBP7.53□□□□□ -1.2
PACS2-203ENST00000447393 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
PACS2-203ENST00000447393 SPENQ96T58 3664 aaKnown RBP7.51□□□□□ -1.21
PACS2-203ENST00000447393 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
PACS2-203ENST00000447393 KRTAP23-1A1A580 65 aa7.37□□□□□ -1.23
PACS2-203ENST00000447393 ALMS1Q8TCU4 4167 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms