RNA–Protein interactions for RNA: ENST00000401669.6

NRXN1-204, Transcript of neurexin 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NRXN1, Length 5,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-204ENST00000401669 LAMA1P25391 3075 aa8.53□□□□□ -1.04
NRXN1-204ENST00000401669 VCANP13611 3396 aa8.48□□□□□ -1.05
NRXN1-204ENST00000401669 TPRXLQ17RH7 258 aa8.48□□□□□ -1.05
NRXN1-204ENST00000401669 CELSR3Q9NYQ7 3312 aa8.46□□□□□ -1.05
NRXN1-204ENST00000401669 KRTAP1-4P0C5Y4 121 aa8.45□□□□□ -1.06
NRXN1-204ENST00000401669 SPTBN5Q9NRC6 3674 aaKnown RBP8.45□□□□□ -1.06
NRXN1-204ENST00000401669 TNRC18O15417 2968 aaPredicted RBP8.4□□□□□ -1.06
NRXN1-204ENST00000401669 P0C880 135 aa8.37□□□□□ -1.07
NRXN1-204ENST00000401669 TENM4Q6N022 2769 aa8.36□□□□□ -1.07
NRXN1-204ENST00000401669 COL6A3P12111 3177 aa8.35□□□□□ -1.07
NRXN1-204ENST00000401669 REV3LO60673 3130 aa8.31□□□□□ -1.08
NRXN1-204ENST00000401669 H0YAA0 97 aa8.3□□□□□ -1.08
NRXN1-204ENST00000401669 ATMQ13315 3056 aa8.3□□□□□ -1.08
NRXN1-204ENST00000401669 LRBAP50851 2863 aa8.3□□□□□ -1.08
NRXN1-204ENST00000401669 ITPR1Q14643 2758 aa8.29□□□□□ -1.08
NRXN1-204ENST00000401669 BOD1L1Q8NFC6 3051 aa8.26□□□□□ -1.09
NRXN1-204ENST00000401669 EYSQ5T1H1 3165 aa8.26□□□□□ -1.09
NRXN1-204ENST00000401669 APCP25054 2843 aa8.26□□□□□ -1.09
NRXN1-204ENST00000401669 KALRNO60229 2985 aa8.26□□□□□ -1.09
NRXN1-204ENST00000401669 HIVEP1P15822 2718 aa8.26□□□□□ -1.09
NRXN1-204ENST00000401669 KRTAP13-3Q3SY46 172 aa8.25□□□□□ -1.09
NRXN1-204ENST00000401669 DMXL2Q8TDJ6 3036 aa8.24□□□□□ -1.09
NRXN1-204ENST00000401669 ADGRG4Q8IZF6 3080 aa8.24□□□□□ -1.09
NRXN1-204ENST00000401669 FLNCQ14315 2725 aa8.23□□□□□ -1.09
NRXN1-204ENST00000401669 UTP20O75691 2785 aaKnown RBP8.23□□□□□ -1.09
NRXN1-204ENST00000401669 FRYLO94915 3013 aa8.22□□□□□ -1.09
NRXN1-204ENST00000401669 CRYBG3Q68DQ2 2970 aa8.21□□□□□ -1.1
NRXN1-204ENST00000401669 COL12A1Q99715 3063 aa8.19□□□□□ -1.1
NRXN1-204ENST00000401669 NBEAQ8NFP9 2946 aa8.16□□□□□ -1.1
NRXN1-204ENST00000401669 TACC2O95359 2948 aa8.16□□□□□ -1.1
NRXN1-204ENST00000401669 USP34Q70CQ2 3546 aa8.15□□□□□ -1.1
NRXN1-204ENST00000401669 FREM2Q5SZK8 3169 aa8.11□□□□□ -1.11
NRXN1-204ENST00000401669 MUC3AQ02505 3323 aa8.1□□□□□ -1.11
NRXN1-204ENST00000401669 DMXL1Q9Y485 3027 aa8.06□□□□□ -1.12
NRXN1-204ENST00000401669 HRNRQ86YZ3 2850 aaPredicted RBP8.04□□□□□ -1.12
NRXN1-204ENST00000401669 ASH1LQ9NR48 2969 aaKnown RBP8.04□□□□□ -1.12
NRXN1-204ENST00000401669 SPEGQ15772 3267 aa8.01□□□□□ -1.13
NRXN1-204ENST00000401669 TENM3Q9P273 2699 aa8.01□□□□□ -1.13
NRXN1-204ENST00000401669 ZZEF1O43149 2961 aa7.99□□□□□ -1.13
NRXN1-204ENST00000401669 NIPBLQ6KC79 2804 aaeCLIP7.95□□□□□ -1.14
NRXN1-204ENST00000401669 TENM1Q9UKZ4 2725 aa7.94□□□□□ -1.14
NRXN1-204ENST00000401669 CFAP47Q6ZTR5 3102 aa7.92□□□□□ -1.14
NRXN1-204ENST00000401669 KRTAP12-2P59991 146 aa7.91□□□□□ -1.14
NRXN1-204ENST00000401669 LOC400499M0QZD8 3231 aa7.89□□□□□ -1.15
NRXN1-204ENST00000401669 MYO15AQ9UKN7 3530 aa7.89□□□□□ -1.15
NRXN1-204ENST00000401669 CELSR2Q9HCU4 2923 aa7.88□□□□□ -1.15
NRXN1-204ENST00000401669 TENM2Q9NT68 2774 aa7.86□□□□□ -1.15
NRXN1-204ENST00000401669 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
NRXN1-204ENST00000401669 ZANQ9Y493 2812 aa7.85□□□□□ -1.15
NRXN1-204ENST00000401669 KRTAP15-1Q3LI76 137 aa7.78□□□□□ -1.16
NRXN1-204ENST00000401669 DCHS2Q6V1P9 2916 aa7.78□□□□□ -1.16
NRXN1-204ENST00000401669 NF1P21359 2839 aa7.74□□□□□ -1.17
NRXN1-204ENST00000401669 KRTAP12-1P59990 96 aa7.7□□□□□ -1.18
NRXN1-204ENST00000401669 TGP01266 2768 aa7.69□□□□□ -1.18
NRXN1-204ENST00000401669 FBN2P35556 2912 aa7.65□□□□□ -1.18
NRXN1-204ENST00000401669 DMDP11532 3685 aa7.64□□□□□ -1.19
NRXN1-204ENST00000401669 WDFY3Q8IZQ1 3526 aa7.63□□□□□ -1.19
NRXN1-204ENST00000401669 PDZD2O15018 2839 aa7.61□□□□□ -1.19
NRXN1-204ENST00000401669 RELNP78509 3460 aa7.6□□□□□ -1.19
NRXN1-204ENST00000401669 ASPMQ8IZT6 3477 aa7.58□□□□□ -1.2
NRXN1-204ENST00000401669 MXRA5Q9NR99 2828 aa7.54□□□□□ -1.2
NRXN1-204ENST00000401669 CRCT1Q9UGL9 99 aa7.53□□□□□ -1.2
NRXN1-204ENST00000401669 PKD1L1Q8TDX9 2849 aa7.52□□□□□ -1.21
NRXN1-204ENST00000401669 ZFHX4Q86UP3 3567 aa7.49□□□□□ -1.21
NRXN1-204ENST00000401669 LAMA5O15230 3695 aa7.48□□□□□ -1.21
NRXN1-204ENST00000401669 KRTAP3-1Q9BYR8 98 aa7.46□□□□□ -1.21
NRXN1-204ENST00000401669 CELSR1Q9NYQ6 3014 aa7.46□□□□□ -1.22
NRXN1-204ENST00000401669 VWFP04275 2813 aa7.4□□□□□ -1.22
NRXN1-204ENST00000401669 ANK3Q12955 4377 aaKnown RBP7.4□□□□□ -1.22
NRXN1-204ENST00000401669 NBPF19A0A087WUL8 3843 aa7.36□□□□□ -1.23
NRXN1-204ENST00000401669 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
NRXN1-204ENST00000401669 DCHS1Q96JQ0 3298 aa7.31□□□□□ -1.24
NRXN1-204ENST00000401669 SMG1Q96Q15 3661 aaKnown RBP7.31□□□□□ -1.24
NRXN1-204ENST00000401669 KRTAP10-6P60371 365 aaPredicted RBP7.29□□□□□ -1.24
NRXN1-204ENST00000401669 CSMD1Q96PZ7 3565 aa7.28□□□□□ -1.24
NRXN1-204ENST00000401669 OTOGQ6ZRI0 2925 aa7.25□□□□□ -1.25
NRXN1-204ENST00000401669 INE1O15225 51 aa7.2□□□□□ -1.26
NRXN1-204ENST00000401669 FBN3Q75N90 2809 aa7.19□□□□□ -1.26
NRXN1-204ENST00000401669 SRRM2Q9UQ35 2752 aaKnown RBP7.16□□□□□ -1.26
NRXN1-204ENST00000401669 MT1HL1P0DM35 61 aa7.16□□□□□ -1.26
NRXN1-204ENST00000401669 BSNQ9UPA5 3926 aa7.16□□□□□ -1.26
NRXN1-204ENST00000401669 SPENQ96T58 3664 aaKnown RBP7.12□□□□□ -1.27
NRXN1-204ENST00000401669 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
NRXN1-204ENST00000401669 SVEP1Q4LDE5 3571 aa7.06□□□□□ -1.28
NRXN1-204ENST00000401669 FBN1P35555 2871 aaKnown RBP7.06□□□□□ -1.28
NRXN1-204ENST00000401669 KRTAP4-5Q9BYR2 181 aa6.97□□□□□ -1.29
NRXN1-204ENST00000401669 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
NRXN1-204ENST00000401669 HUWE1Q7Z6Z7 4374 aaKnown RBP6.96□□□□□ -1.3
NRXN1-204ENST00000401669 ZFHX3Q15911 3703 aa6.95□□□□□ -1.3
NRXN1-204ENST00000401669 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
NRXN1-204ENST00000401669 CSMD2Q7Z408 3487 aa6.93□□□□□ -1.3
NRXN1-204ENST00000401669 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
NRXN1-204ENST00000401669 TRRAPQ9Y4A5 3859 aa6.91□□□□□ -1.3
NRXN1-204ENST00000401669 KRTAP8-1Q8IUC2 63 aa6.9□□□□□ -1.31
NRXN1-204ENST00000401669 KRTAP10-5P60370 271 aa6.89□□□□□ -1.31
NRXN1-204ENST00000401669 MEGF8Q7Z7M0 2845 aa6.84□□□□□ -1.31
NRXN1-204ENST00000401669 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
NRXN1-204ENST00000401669 ALMS1Q8TCU4 4167 aa6.8□□□□□ -1.32
NRXN1-204ENST00000401669 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
NRXN1-204ENST00000401669 COL7A1Q02388 2944 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms