RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
TRPM1-202ENST00000397795 H0YAA0 97 aa5.05□□□□□ -1.6
TRPM1-202ENST00000397795 KRTAP13-1Q8IUC0 172 aa5.04□□□□□ -1.6
TRPM1-202ENST00000397795 MYO15AQ9UKN7 3530 aa5.04□□□□□ -1.6
TRPM1-202ENST00000397795 LOC400499M0QZD8 3231 aa5.04□□□□□ -1.6
TRPM1-202ENST00000397795 CFAP47Q6ZTR5 3102 aa5.03□□□□□ -1.6
TRPM1-202ENST00000397795 KRTAP1-1Q07627 177 aa5.02□□□□□ -1.61
TRPM1-202ENST00000397795 APCP25054 2843 aa5.02□□□□□ -1.61
TRPM1-202ENST00000397795 TEX15Q9BXT5 2789 aa5.01□□□□□ -1.61
TRPM1-202ENST00000397795 UTP20O75691 2785 aaKnown RBP5.01□□□□□ -1.61
TRPM1-202ENST00000397795 KRTAP10-8P60410 259 aa5.01□□□□□ -1.61
TRPM1-202ENST00000397795 KRTAP13-3Q3SY46 172 aa4.99□□□□□ -1.61
TRPM1-202ENST00000397795 KRTAP1-5Q9BYS1 174 aa4.99□□□□□ -1.61
TRPM1-202ENST00000397795 NOTCH1P46531 2555 aa4.99□□□□□ -1.61
TRPM1-202ENST00000397795 STAB1Q9NY15 2570 aa4.99□□□□□ -1.61
TRPM1-202ENST00000397795 SETXQ7Z333 2677 aaKnown RBP4.99□□□□□ -1.61
TRPM1-202ENST00000397795 NBEAL1Q6ZS30 2694 aa4.98□□□□□ -1.61
TRPM1-202ENST00000397795 Q5VSD8 79 aa4.97□□□□□ -1.61
TRPM1-202ENST00000397795 USP34Q70CQ2 3546 aa4.97□□□□□ -1.61
TRPM1-202ENST00000397795 COL6A5A8TX70 2615 aa4.97□□□□□ -1.61
TRPM1-202ENST00000397795 MUC3AQ02505 3323 aa4.97□□□□□ -1.61
TRPM1-202ENST00000397795 UBR5O95071 2799 aaPredicted RBP4.96□□□□□ -1.62
TRPM1-202ENST00000397795 ITPR2Q14571 2701 aa4.95□□□□□ -1.62
TRPM1-202ENST00000397795 ZFHX3Q15911 3703 aa4.95□□□□□ -1.62
TRPM1-202ENST00000397795 HRNRQ86YZ3 2850 aaPredicted RBP4.93□□□□□ -1.62
TRPM1-202ENST00000397795 DCHS1Q96JQ0 3298 aa4.92□□□□□ -1.62
TRPM1-202ENST00000397795 ZANQ9Y493 2812 aa4.91□□□□□ -1.62
TRPM1-202ENST00000397795 INE1O15225 51 aa4.89□□□□□ -1.63
TRPM1-202ENST00000397795 STAB2Q8WWQ8 2551 aa4.87□□□□□ -1.63
TRPM1-202ENST00000397795 Q6ZRN7 208 aaPredicted RBP4.87□□□□□ -1.63
TRPM1-202ENST00000397795 KRTAP10-1P60331 282 aa4.86□□□□□ -1.63
TRPM1-202ENST00000397795 WDFY3Q8IZQ1 3526 aa4.85□□□□□ -1.63
TRPM1-202ENST00000397795 CSMD1Q96PZ7 3565 aa4.83□□□□□ -1.64
TRPM1-202ENST00000397795 CRYBG3Q68DQ2 2970 aa4.82□□□□□ -1.64
TRPM1-202ENST00000397795 DMDP11532 3685 aa4.8□□□□□ -1.64
TRPM1-202ENST00000397795 HIVEP1P15822 2718 aa4.8□□□□□ -1.64
TRPM1-202ENST00000397795 FBN2P35556 2912 aa4.8□□□□□ -1.64
TRPM1-202ENST00000397795 TPRXLQ17RH7 258 aa4.8□□□□□ -1.64
TRPM1-202ENST00000397795 NF1P21359 2839 aa4.8□□□□□ -1.64
TRPM1-202ENST00000397795 NSD1Q96L73 2696 aaPredicted RBP4.79□□□□□ -1.64
TRPM1-202ENST00000397795 CELSR2Q9HCU4 2923 aa4.79□□□□□ -1.64
TRPM1-202ENST00000397795 LAMA5O15230 3695 aa4.79□□□□□ -1.64
TRPM1-202ENST00000397795 DCHS2Q6V1P9 2916 aa4.79□□□□□ -1.64
TRPM1-202ENST00000397795 KRTAP10-2P60368 255 aa4.78□□□□□ -1.64
TRPM1-202ENST00000397795 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
TRPM1-202ENST00000397795 RELNP78509 3460 aa4.77□□□□□ -1.65
TRPM1-202ENST00000397795 KRTAP13-2Q52LG2 175 aa4.77□□□□□ -1.65
TRPM1-202ENST00000397795 ASPMQ8IZT6 3477 aa4.75□□□□□ -1.65
TRPM1-202ENST00000397795 ZFHX4Q86UP3 3567 aa4.75□□□□□ -1.65
TRPM1-202ENST00000397795 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
TRPM1-202ENST00000397795 NIPBLQ6KC79 2804 aaeCLIP4.74□□□□□ -1.65
TRPM1-202ENST00000397795 MXRA5Q9NR99 2828 aa4.74□□□□□ -1.65
TRPM1-202ENST00000397795 SMG1Q96Q15 3661 aaKnown RBP4.73□□□□□ -1.65
TRPM1-202ENST00000397795 KRTAP21-3Q3LHN1 58 aa4.73□□□□□ -1.65
TRPM1-202ENST00000397795 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
TRPM1-202ENST00000397795 TGP01266 2768 aa4.68□□□□□ -1.66
TRPM1-202ENST00000397795 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
TRPM1-202ENST00000397795 KMT2BQ9UMN6 2715 aaPredicted RBP4.65□□□□□ -1.67
TRPM1-202ENST00000397795 SPENQ96T58 3664 aaKnown RBP4.63□□□□□ -1.67
TRPM1-202ENST00000397795 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
TRPM1-202ENST00000397795 TENM4Q6N022 2769 aa4.59□□□□□ -1.68
TRPM1-202ENST00000397795 CELSR1Q9NYQ6 3014 aa4.59□□□□□ -1.68
TRPM1-202ENST00000397795 SVEP1Q4LDE5 3571 aa4.56□□□□□ -1.68
TRPM1-202ENST00000397795 KRTAP3-1Q9BYR8 98 aa4.55□□□□□ -1.68
TRPM1-202ENST00000397795 TENM3Q9P273 2699 aa4.55□□□□□ -1.68
TRPM1-202ENST00000397795 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
TRPM1-202ENST00000397795 SRRM2Q9UQ35 2752 aaKnown RBP4.54□□□□□ -1.68
TRPM1-202ENST00000397795 XP32Q5T750 250 aa4.53□□□□□ -1.68
TRPM1-202ENST00000397795 PDZD2O15018 2839 aa4.52□□□□□ -1.69
TRPM1-202ENST00000397795 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
TRPM1-202ENST00000397795 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
TRPM1-202ENST00000397795 A0A1B0GVY2 172 aa4.5□□□□□ -1.69
TRPM1-202ENST00000397795 TENM1Q9UKZ4 2725 aa4.49□□□□□ -1.69
TRPM1-202ENST00000397795 OTOGQ6ZRI0 2925 aa4.48□□□□□ -1.69
TRPM1-202ENST00000397795 KRTAP10-10P60014 251 aa4.46□□□□□ -1.69
TRPM1-202ENST00000397795 VWFP04275 2813 aa4.44□□□□□ -1.7
TRPM1-202ENST00000397795 TENM2Q9NT68 2774 aa4.44□□□□□ -1.7
TRPM1-202ENST00000397795 CUBNO60494 3623 aa4.42□□□□□ -1.7
TRPM1-202ENST00000397795 FBN1P35555 2871 aaKnown RBP4.42□□□□□ -1.7
TRPM1-202ENST00000397795 PKD1L1Q8TDX9 2849 aa4.4□□□□□ -1.7
TRPM1-202ENST00000397795 KRTAP3-2Q9BYR7 98 aa4.36□□□□□ -1.71
TRPM1-202ENST00000397795 NBPF19A0A087WUL8 3843 aa4.35□□□□□ -1.71
TRPM1-202ENST00000397795 CSMD2Q7Z408 3487 aa4.34□□□□□ -1.71
TRPM1-202ENST00000397795 ALMS1Q8TCU4 4167 aa4.34□□□□□ -1.71
TRPM1-202ENST00000397795 BSNQ9UPA5 3926 aa4.34□□□□□ -1.72
TRPM1-202ENST00000397795 KRTAP3-3Q9BYR6 98 aa4.28□□□□□ -1.72
TRPM1-202ENST00000397795 COL7A1Q02388 2944 aa4.26□□□□□ -1.73
TRPM1-202ENST00000397795 FBN3Q75N90 2809 aa4.21□□□□□ -1.74
TRPM1-202ENST00000397795 MEGF8Q7Z7M0 2845 aa4.18□□□□□ -1.74
TRPM1-202ENST00000397795 VPS13CQ709C8 3753 aa4.16□□□□□ -1.74
TRPM1-202ENST00000397795 TRRAPQ9Y4A5 3859 aa4.15□□□□□ -1.74
TRPM1-202ENST00000397795 ANK3Q12955 4377 aaKnown RBP4.13□□□□□ -1.75
TRPM1-202ENST00000397795 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
TRPM1-202ENST00000397795 CRCT1Q9UGL9 99 aa4.05□□□□□ -1.76
TRPM1-202ENST00000397795 ZNF469Q96JG9 3925 aaPredicted RBP4.04□□□□□ -1.76
TRPM1-202ENST00000397795 AKAP9Q99996 3911 aa4.03□□□□□ -1.76
TRPM1-202ENST00000397795 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
TRPM1-202ENST00000397795 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
TRPM1-202ENST00000397795 CSMD3Q7Z407 3707 aa3.93□□□□□ -1.78
TRPM1-202ENST00000397795 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms