RNA–Protein interactions for RNA: ENST00000397091.9

FGFR1-206, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 5,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-206ENST00000397091 UTP20O75691 2785 aaKnown RBP9.54□□□□□ -0.88
FGFR1-206ENST00000397091 CELSR3Q9NYQ7 3312 aa9.53□□□□□ -0.88
FGFR1-206ENST00000397091 H0YAA0 97 aa9.5□□□□□ -0.89
FGFR1-206ENST00000397091 C10orf95Q9H7T3 257 aa9.5□□□□□ -0.89
FGFR1-206ENST00000397091 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
FGFR1-206ENST00000397091 KRTAP10-8P60410 259 aa9.47□□□□□ -0.89
FGFR1-206ENST00000397091 TPRXLQ17RH7 258 aa9.47□□□□□ -0.89
FGFR1-206ENST00000397091 NBEAQ8NFP9 2946 aa9.45□□□□□ -0.9
FGFR1-206ENST00000397091 ATMQ13315 3056 aa9.45□□□□□ -0.9
FGFR1-206ENST00000397091 COL12A1Q99715 3063 aa9.45□□□□□ -0.9
FGFR1-206ENST00000397091 KALRNO60229 2985 aa9.43□□□□□ -0.9
FGFR1-206ENST00000397091 CDH23Q9H251 3354 aa9.42□□□□□ -0.9
FGFR1-206ENST00000397091 KRTAP10-10P60014 251 aa9.41□□□□□ -0.9
FGFR1-206ENST00000397091 DNAH14Q0VDD8 3507 aa9.41□□□□□ -0.9
FGFR1-206ENST00000397091 FRYLO94915 3013 aa9.37□□□□□ -0.91
FGFR1-206ENST00000397091 APCP25054 2843 aa9.36□□□□□ -0.91
FGFR1-206ENST00000397091 LRBAP50851 2863 aa9.35□□□□□ -0.91
FGFR1-206ENST00000397091 VCANP13611 3396 aa9.34□□□□□ -0.91
FGFR1-206ENST00000397091 P0C880 135 aa9.34□□□□□ -0.91
FGFR1-206ENST00000397091 DMXL2Q8TDJ6 3036 aa9.32□□□□□ -0.92
FGFR1-206ENST00000397091 LAMA1P25391 3075 aa9.31□□□□□ -0.92
FGFR1-206ENST00000397091 NIPBLQ6KC79 2804 aaeCLIP9.3□□□□□ -0.92
FGFR1-206ENST00000397091 PP632Q6XCG6 107 aa9.3□□□□□ -0.92
FGFR1-206ENST00000397091 PRO2289Q9P1D8 64 aa9.25□□□□□ -0.93
FGFR1-206ENST00000397091 EYSQ5T1H1 3165 aa9.25□□□□□ -0.93
FGFR1-206ENST00000397091 KRTAP13-3Q3SY46 172 aa9.21□□□□□ -0.93
FGFR1-206ENST00000397091 SZT2Q5T011 3432 aa9.16□□□□□ -0.94
FGFR1-206ENST00000397091 CELSR2Q9HCU4 2923 aa9.16□□□□□ -0.94
FGFR1-206ENST00000397091 ASH1LQ9NR48 2969 aaKnown RBP9.16□□□□□ -0.94
FGFR1-206ENST00000397091 TNRC18O15417 2968 aaPredicted RBP9.14□□□□□ -0.95
FGFR1-206ENST00000397091 ADGRG4Q8IZF6 3080 aa9.13□□□□□ -0.95
FGFR1-206ENST00000397091 TENM2Q9NT68 2774 aa9.1□□□□□ -0.95
FGFR1-206ENST00000397091 ZZEF1O43149 2961 aa9.1□□□□□ -0.95
FGFR1-206ENST00000397091 BOD1L1Q8NFC6 3051 aa9.1□□□□□ -0.95
FGFR1-206ENST00000397091 DCHS2Q6V1P9 2916 aa9.09□□□□□ -0.95
FGFR1-206ENST00000397091 TENM1Q9UKZ4 2725 aa9.08□□□□□ -0.96
FGFR1-206ENST00000397091 COL6A3P12111 3177 aa9.06□□□□□ -0.96
FGFR1-206ENST00000397091 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
FGFR1-206ENST00000397091 SPEGQ15772 3267 aa8.98□□□□□ -0.97
FGFR1-206ENST00000397091 CFAP47Q6ZTR5 3102 aa8.96□□□□□ -0.98
FGFR1-206ENST00000397091 NF1P21359 2839 aa8.94□□□□□ -0.98
FGFR1-206ENST00000397091 ZANQ9Y493 2812 aa8.89□□□□□ -0.99
FGFR1-206ENST00000397091 DMXL1Q9Y485 3027 aa8.82□□□□□ -1
FGFR1-206ENST00000397091 KRTAP12-2P59991 146 aa8.8□□□□□ -1
FGFR1-206ENST00000397091 USP34Q70CQ2 3546 aa8.79□□□□□ -1
FGFR1-206ENST00000397091 HRNRQ86YZ3 2850 aaPredicted RBP8.72□□□□□ -1.01
FGFR1-206ENST00000397091 PKD1L1Q8TDX9 2849 aa8.71□□□□□ -1.02
FGFR1-206ENST00000397091 MXRA5Q9NR99 2828 aa8.7□□□□□ -1.02
FGFR1-206ENST00000397091 SPTBN5Q9NRC6 3674 aaKnown RBP8.66□□□□□ -1.02
FGFR1-206ENST00000397091 TGP01266 2768 aa8.66□□□□□ -1.02
FGFR1-206ENST00000397091 FBN2P35556 2912 aa8.63□□□□□ -1.03
FGFR1-206ENST00000397091 KRTAP12-1P59990 96 aa8.63□□□□□ -1.03
FGFR1-206ENST00000397091 CELSR1Q9NYQ6 3014 aa8.62□□□□□ -1.03
FGFR1-206ENST00000397091 MYO15AQ9UKN7 3530 aa8.6□□□□□ -1.03
FGFR1-206ENST00000397091 LOC400499M0QZD8 3231 aa8.59□□□□□ -1.03
FGFR1-206ENST00000397091 KRTAP13-4Q3LI77 160 aa8.57□□□□□ -1.04
FGFR1-206ENST00000397091 VWFP04275 2813 aa8.54□□□□□ -1.04
FGFR1-206ENST00000397091 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
FGFR1-206ENST00000397091 KRTAP15-1Q3LI76 137 aa8.45□□□□□ -1.06
FGFR1-206ENST00000397091 PDZD2O15018 2839 aa8.43□□□□□ -1.06
FGFR1-206ENST00000397091 WDFY3Q8IZQ1 3526 aa8.4□□□□□ -1.07
FGFR1-206ENST00000397091 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
FGFR1-206ENST00000397091 DCHS1Q96JQ0 3298 aa8.34□□□□□ -1.07
FGFR1-206ENST00000397091 MT1HL1P0DM35 61 aa8.27□□□□□ -1.09
FGFR1-206ENST00000397091 OTOGQ6ZRI0 2925 aa8.24□□□□□ -1.09
FGFR1-206ENST00000397091 NBPF19A0A087WUL8 3843 aa8.23□□□□□ -1.09
FGFR1-206ENST00000397091 ZFHX4Q86UP3 3567 aa8.22□□□□□ -1.09
FGFR1-206ENST00000397091 RELNP78509 3460 aa8.2□□□□□ -1.1
FGFR1-206ENST00000397091 KRTAP4-5Q9BYR2 181 aa8.17□□□□□ -1.1
FGFR1-206ENST00000397091 INE1O15225 51 aa8.17□□□□□ -1.1
FGFR1-206ENST00000397091 CSMD1Q96PZ7 3565 aa8.16□□□□□ -1.1
FGFR1-206ENST00000397091 SRRM2Q9UQ35 2752 aaKnown RBP8.15□□□□□ -1.11
FGFR1-206ENST00000397091 FBN3Q75N90 2809 aa8.14□□□□□ -1.11
FGFR1-206ENST00000397091 ASPMQ8IZT6 3477 aa8.1□□□□□ -1.11
FGFR1-206ENST00000397091 FBN1P35555 2871 aaKnown RBP8.07□□□□□ -1.12
FGFR1-206ENST00000397091 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
FGFR1-206ENST00000397091 ZFHX3Q15911 3703 aa8.04□□□□□ -1.12
FGFR1-206ENST00000397091 ANK3Q12955 4377 aaKnown RBP8.01□□□□□ -1.13
FGFR1-206ENST00000397091 LAMA5O15230 3695 aa7.98□□□□□ -1.13
FGFR1-206ENST00000397091 KRTAP3-3Q9BYR6 98 aa7.98□□□□□ -1.13
FGFR1-206ENST00000397091 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
FGFR1-206ENST00000397091 SMG1Q96Q15 3661 aaKnown RBP7.97□□□□□ -1.13
FGFR1-206ENST00000397091 KRTAP10-12P60413 245 aa7.92□□□□□ -1.14
FGFR1-206ENST00000397091 KRTAP10-4P60372 401 aaPredicted RBP7.89□□□□□ -1.15
FGFR1-206ENST00000397091 SVEP1Q4LDE5 3571 aa7.83□□□□□ -1.16
FGFR1-206ENST00000397091 CUBNO60494 3623 aa7.79□□□□□ -1.16
FGFR1-206ENST00000397091 MEGF8Q7Z7M0 2845 aa7.77□□□□□ -1.17
FGFR1-206ENST00000397091 DMDP11532 3685 aa7.76□□□□□ -1.17
FGFR1-206ENST00000397091 COL7A1Q02388 2944 aa7.75□□□□□ -1.17
FGFR1-206ENST00000397091 ALMS1Q8TCU4 4167 aa7.67□□□□□ -1.18
FGFR1-206ENST00000397091 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.19
FGFR1-206ENST00000397091 KRTAP12-3P60328 96 aa7.6□□□□□ -1.19
FGFR1-206ENST00000397091 HUWE1Q7Z6Z7 4374 aaKnown RBP7.58□□□□□ -1.2
FGFR1-206ENST00000397091 KRTAP8-1Q8IUC2 63 aa7.57□□□□□ -1.2
FGFR1-206ENST00000397091 TRRAPQ9Y4A5 3859 aa7.54□□□□□ -1.2
FGFR1-206ENST00000397091 CSMD2Q7Z408 3487 aa7.54□□□□□ -1.2
FGFR1-206ENST00000397091 MUC3AQ02505 3323 aa7.54□□□□□ -1.2
FGFR1-206ENST00000397091 LORP23490 312 aaPredicted RBP7.52□□□□□ -1.21
FGFR1-206ENST00000397091 SPENQ96T58 3664 aaKnown RBP7.52□□□□□ -1.21
FGFR1-206ENST00000397091 LCE3AQ5TA76 89 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 274.8 ms