RNA–Protein interactions for RNA: ENST00000396065.2

GCNT3-201, Transcript of glucosaminyl (N-acetyl) transferase 3, mucin type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCNT3, Length 4,933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT3-201ENST00000396065 KRTAP10-2P60368 255 aa4.62□□□□□ -1.67
GCNT3-201ENST00000396065 RPS29P62273 56 aaKnown RBP4.62□□□□□ -1.67
GCNT3-201ENST00000396065 KRTAP13-2Q52LG2 175 aa4.61□□□□□ -1.67
GCNT3-201ENST00000396065 SPENQ96T58 3664 aaKnown RBP4.61□□□□□ -1.67
GCNT3-201ENST00000396065 APCP25054 2843 aa4.6□□□□□ -1.67
GCNT3-201ENST00000396065 FRYQ5TBA9 3013 aa4.57□□□□□ -1.68
GCNT3-201ENST00000396065 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
GCNT3-201ENST00000396065 SMG1Q96Q15 3661 aaKnown RBP4.56□□□□□ -1.68
GCNT3-201ENST00000396065 KMT2BQ9UMN6 2715 aaPredicted RBP4.56□□□□□ -1.68
GCNT3-201ENST00000396065 KALRNO60229 2985 aa4.54□□□□□ -1.68
GCNT3-201ENST00000396065 NBEAQ8NFP9 2946 aa4.54□□□□□ -1.68
GCNT3-201ENST00000396065 ASPMQ8IZT6 3477 aa4.52□□□□□ -1.69
GCNT3-201ENST00000396065 KRTAP3-3Q9BYR6 98 aa4.52□□□□□ -1.69
GCNT3-201ENST00000396065 KRTAP3-2Q9BYR7 98 aa4.52□□□□□ -1.69
GCNT3-201ENST00000396065 COL6A3P12111 3177 aa4.52□□□□□ -1.69
GCNT3-201ENST00000396065 TPRXLQ17RH7 258 aa4.51□□□□□ -1.69
GCNT3-201ENST00000396065 Q5VSD8 79 aa4.5□□□□□ -1.69
GCNT3-201ENST00000396065 DMXL2Q8TDJ6 3036 aa4.49□□□□□ -1.69
GCNT3-201ENST00000396065 TRIOO75962 3097 aa4.46□□□□□ -1.7
GCNT3-201ENST00000396065 ITPR2Q14571 2701 aa4.45□□□□□ -1.7
GCNT3-201ENST00000396065 CSMD1Q96PZ7 3565 aa4.45□□□□□ -1.7
GCNT3-201ENST00000396065 RELNP78509 3460 aa4.44□□□□□ -1.7
GCNT3-201ENST00000396065 HIVEP1P15822 2718 aa4.44□□□□□ -1.7
GCNT3-201ENST00000396065 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
GCNT3-201ENST00000396065 TGP01266 2768 aa4.41□□□□□ -1.7
GCNT3-201ENST00000396065 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
GCNT3-201ENST00000396065 WDFY4Q6ZS81 3184 aa4.39□□□□□ -1.71
GCNT3-201ENST00000396065 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
GCNT3-201ENST00000396065 CSMD2Q7Z408 3487 aa4.39□□□□□ -1.71
GCNT3-201ENST00000396065 SPEGQ15772 3267 aa4.38□□□□□ -1.71
GCNT3-201ENST00000396065 VPS13AQ96RL7 3174 aa4.38□□□□□ -1.71
GCNT3-201ENST00000396065 MUC3AQ02505 3323 aa4.37□□□□□ -1.71
GCNT3-201ENST00000396065 KRTAP21-3Q3LHN1 58 aa4.37□□□□□ -1.71
GCNT3-201ENST00000396065 COL12A1Q99715 3063 aa4.37□□□□□ -1.71
GCNT3-201ENST00000396065 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
GCNT3-201ENST00000396065 TACC2O95359 2948 aa4.35□□□□□ -1.71
GCNT3-201ENST00000396065 REV3LO60673 3130 aa4.34□□□□□ -1.71
GCNT3-201ENST00000396065 FRYLO94915 3013 aa4.34□□□□□ -1.72
GCNT3-201ENST00000396065 CELSR2Q9HCU4 2923 aa4.33□□□□□ -1.72
GCNT3-201ENST00000396065 NIPBLQ6KC79 2804 aaeCLIP4.33□□□□□ -1.72
GCNT3-201ENST00000396065 EYSQ5T1H1 3165 aa4.32□□□□□ -1.72
GCNT3-201ENST00000396065 TENM3Q9P273 2699 aa4.31□□□□□ -1.72
GCNT3-201ENST00000396065 INE1O15225 51 aa4.31□□□□□ -1.72
GCNT3-201ENST00000396065 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
GCNT3-201ENST00000396065 KRTAP1-4P0C5Y4 121 aa4.3□□□□□ -1.72
GCNT3-201ENST00000396065 KRTAP13-4Q3LI77 160 aa4.29□□□□□ -1.72
GCNT3-201ENST00000396065 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
GCNT3-201ENST00000396065 SVEP1Q4LDE5 3571 aa4.28□□□□□ -1.72
GCNT3-201ENST00000396065 XP32Q5T750 250 aa4.28□□□□□ -1.72
GCNT3-201ENST00000396065 DMXL1Q9Y485 3027 aa4.25□□□□□ -1.73
GCNT3-201ENST00000396065 CRYBG3Q68DQ2 2970 aa4.24□□□□□ -1.73
GCNT3-201ENST00000396065 PDZD2O15018 2839 aa4.23□□□□□ -1.73
GCNT3-201ENST00000396065 TENM1Q9UKZ4 2725 aa4.22□□□□□ -1.73
GCNT3-201ENST00000396065 DCHS2Q6V1P9 2916 aa4.21□□□□□ -1.73
GCNT3-201ENST00000396065 ADGRG4Q8IZF6 3080 aa4.21□□□□□ -1.73
GCNT3-201ENST00000396065 LAMA1P25391 3075 aa4.21□□□□□ -1.74
GCNT3-201ENST00000396065 CELSR3Q9NYQ7 3312 aa4.21□□□□□ -1.74
GCNT3-201ENST00000396065 NBPF19A0A087WUL8 3843 aa4.21□□□□□ -1.74
GCNT3-201ENST00000396065 A0A1B0GVY2 172 aa4.2□□□□□ -1.74
GCNT3-201ENST00000396065 LAMA5O15230 3695 aa4.2□□□□□ -1.74
GCNT3-201ENST00000396065 NF1P21359 2839 aa4.19□□□□□ -1.74
GCNT3-201ENST00000396065 ZZEF1O43149 2961 aa4.18□□□□□ -1.74
GCNT3-201ENST00000396065 FLNCQ14315 2725 aa4.18□□□□□ -1.74
GCNT3-201ENST00000396065 BOD1L1Q8NFC6 3051 aa4.17□□□□□ -1.74
GCNT3-201ENST00000396065 SRRM2Q9UQ35 2752 aaKnown RBP4.16□□□□□ -1.74
GCNT3-201ENST00000396065 TENM2Q9NT68 2774 aa4.16□□□□□ -1.74
GCNT3-201ENST00000396065 ATMQ13315 3056 aa4.16□□□□□ -1.74
GCNT3-201ENST00000396065 KRTAP3-1Q9BYR8 98 aa4.15□□□□□ -1.75
GCNT3-201ENST00000396065 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
GCNT3-201ENST00000396065 ZANQ9Y493 2812 aa4.12□□□□□ -1.75
GCNT3-201ENST00000396065 CFAP47Q6ZTR5 3102 aa4.12□□□□□ -1.75
GCNT3-201ENST00000396065 LOC400499M0QZD8 3231 aa4.11□□□□□ -1.75
GCNT3-201ENST00000396065 CUBNO60494 3623 aa4.11□□□□□ -1.75
GCNT3-201ENST00000396065 TENM4Q6N022 2769 aa4.1□□□□□ -1.75
GCNT3-201ENST00000396065 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
GCNT3-201ENST00000396065 FBN2P35556 2912 aa4.06□□□□□ -1.76
GCNT3-201ENST00000396065 DCHS1Q96JQ0 3298 aa4.05□□□□□ -1.76
GCNT3-201ENST00000396065 AKAP9Q99996 3911 aa4.01□□□□□ -1.77
GCNT3-201ENST00000396065 CELSR1Q9NYQ6 3014 aa4.01□□□□□ -1.77
GCNT3-201ENST00000396065 PKD1L1Q8TDX9 2849 aa3.96□□□□□ -1.78
GCNT3-201ENST00000396065 BSNQ9UPA5 3926 aa3.92□□□□□ -1.78
GCNT3-201ENST00000396065 CSMD3Q7Z407 3707 aa3.91□□□□□ -1.78
GCNT3-201ENST00000396065 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
GCNT3-201ENST00000396065 VWFP04275 2813 aa3.89□□□□□ -1.79
GCNT3-201ENST00000396065 MXRA5Q9NR99 2828 aa3.88□□□□□ -1.79
GCNT3-201ENST00000396065 ZNF469Q96JG9 3925 aaPredicted RBP3.87□□□□□ -1.79
GCNT3-201ENST00000396065 VPS13CQ709C8 3753 aa3.87□□□□□ -1.79
GCNT3-201ENST00000396065 HRNRQ86YZ3 2850 aaPredicted RBP3.87□□□□□ -1.79
GCNT3-201ENST00000396065 OTOGQ6ZRI0 2925 aa3.83□□□□□ -1.8
GCNT3-201ENST00000396065 MEGF8Q7Z7M0 2845 aa3.83□□□□□ -1.8
GCNT3-201ENST00000396065 LCE2BO14633 110 aa3.81□□□□□ -1.8
GCNT3-201ENST00000396065 FBN3Q75N90 2809 aa3.8□□□□□ -1.8
GCNT3-201ENST00000396065 LCE2CQ5TA81 110 aa3.75□□□□□ -1.81
GCNT3-201ENST00000396065 COL7A1Q02388 2944 aa3.75□□□□□ -1.81
GCNT3-201ENST00000396065 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
GCNT3-201ENST00000396065 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
GCNT3-201ENST00000396065 LCE2AQ5TA79 106 aaPredicted RBP3.68□□□□□ -1.82
GCNT3-201ENST00000396065 ANK2Q01484 3957 aa3.68□□□□□ -1.82
GCNT3-201ENST00000396065 ANK3Q12955 4377 aaKnown RBP3.67□□□□□ -1.82
GCNT3-201ENST00000396065 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms