RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
ATG4A-205ENST00000394892 LINC00472Q9H8W2 130 aa4.51□□□□□ -1.69
ATG4A-205ENST00000394892 SNCGO76070 127 aa4.5□□□□□ -1.69
ATG4A-205ENST00000394892 DEFB116Q30KQ4 102 aa4.5□□□□□ -1.69
ATG4A-205ENST00000394892 TRBV7-4A0A0J9YYF1 115 aa4.49□□□□□ -1.69
ATG4A-205ENST00000394892 ANKRD29Q8N6D5 301 aa4.49□□□□□ -1.69
ATG4A-205ENST00000394892 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
ATG4A-205ENST00000394892 ORMDL1Q9P0S3 153 aa4.49□□□□□ -1.69
ATG4A-205ENST00000394892 V9GYY9 64 aa4.49□□□□□ -1.69
ATG4A-205ENST00000394892 IGKV4-1P06312 121 aa4.47□□□□□ -1.69
ATG4A-205ENST00000394892 PSMB2P49721 201 aa4.47□□□□□ -1.69
ATG4A-205ENST00000394892 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
ATG4A-205ENST00000394892 MPLKIPQ8TAP9 179 aa4.47□□□□□ -1.69
ATG4A-205ENST00000394892 SIGMAR1Q99720 223 aa4.47□□□□□ -1.69
ATG4A-205ENST00000394892 UQCR10Q9UDW1 63 aa4.47□□□□□ -1.69
ATG4A-205ENST00000394892 HRES1P13985 223 aa4.46□□□□□ -1.7
ATG4A-205ENST00000394892 VPS25Q9BRG1 176 aa4.46□□□□□ -1.7
ATG4A-205ENST00000394892 USH2AO75445 5202 aa4.45□□□□□ -1.7
ATG4A-205ENST00000394892 TMEM256-PLSCR3K7ERE1 68 aa4.45□□□□□ -1.7
ATG4A-205ENST00000394892 TRACP01848 142 aa4.45□□□□□ -1.7
ATG4A-205ENST00000394892 CCKP06307 115 aa4.45□□□□□ -1.7
ATG4A-205ENST00000394892 LINC00313P59037 77 aa4.45□□□□□ -1.7
ATG4A-205ENST00000394892 UBE2V1Q13404 147 aa4.45□□□□□ -1.7
ATG4A-205ENST00000394892 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
ATG4A-205ENST00000394892 TRBV20-1A0A075B6N2 111 aa4.44□□□□□ -1.7
ATG4A-205ENST00000394892 DNAL4O96015 105 aa4.44□□□□□ -1.7
ATG4A-205ENST00000394892 IGHV6-1A0A0B4J1U7 121 aa4.42□□□□□ -1.7
ATG4A-205ENST00000394892 H3BQ85 93 aa4.42□□□□□ -1.7
ATG4A-205ENST00000394892 MT2AP02795 61 aa4.42□□□□□ -1.7
ATG4A-205ENST00000394892 COX6CP09669 75 aa4.42□□□□□ -1.7
ATG4A-205ENST00000394892 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
ATG4A-205ENST00000394892 NAA38Q9BRA0 125 aaKnown RBP4.42□□□□□ -1.7
ATG4A-205ENST00000394892 BAALC-AS2P0C853 105 aa4.41□□□□□ -1.7
ATG4A-205ENST00000394892 A0A1B0GVX0 72 aa4.4□□□□□ -1.71
ATG4A-205ENST00000394892 SCGB1C2P0DMR2 95 aa4.4□□□□□ -1.71
ATG4A-205ENST00000394892 RBM3P98179 157 aaKnown RBP4.4□□□□□ -1.71
ATG4A-205ENST00000394892 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
ATG4A-205ENST00000394892 MT1FP04733 61 aa4.39□□□□□ -1.71
ATG4A-205ENST00000394892 Q6ZQT0 140 aa4.39□□□□□ -1.71
ATG4A-205ENST00000394892 SMIM20Q8N5G0 67 aa4.39□□□□□ -1.71
ATG4A-205ENST00000394892 LINC00846Q9NV44 126 aa4.39□□□□□ -1.71
ATG4A-205ENST00000394892 K7ERU9 68 aa4.38□□□□□ -1.71
ATG4A-205ENST00000394892 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
ATG4A-205ENST00000394892 FAM236DA0A1B0GTK5 79 aa4.36□□□□□ -1.71
ATG4A-205ENST00000394892 C8orf87E5RJ46 101 aa4.36□□□□□ -1.71
ATG4A-205ENST00000394892 FAM236CP0DP71 79 aa4.36□□□□□ -1.71
ATG4A-205ENST00000394892 DSCR8Q96T75 97 aa4.36□□□□□ -1.71
ATG4A-205ENST00000394892 C9orf118A6NHY6 69 aa4.35□□□□□ -1.71
ATG4A-205ENST00000394892 C9JAW5 83 aa4.35□□□□□ -1.71
ATG4A-205ENST00000394892 M0R143 59 aa4.35□□□□□ -1.71
ATG4A-205ENST00000394892 Q8N9P0 234 aaPredicted RBP4.35□□□□□ -1.71
ATG4A-205ENST00000394892 ZCCHC13Q8WW36 166 aaKnown RBP4.35□□□□□ -1.71
ATG4A-205ENST00000394892 LOC110117498A0A087WWA1 95 aa4.34□□□□□ -1.71
ATG4A-205ENST00000394892 IGKV3D-7A0A0C4DH55 119 aa4.34□□□□□ -1.71
ATG4A-205ENST00000394892 SPINK7P58062 85 aa4.33□□□□□ -1.72
ATG4A-205ENST00000394892 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
ATG4A-205ENST00000394892 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
ATG4A-205ENST00000394892 J3KT08 172 aa4.32□□□□□ -1.72
ATG4A-205ENST00000394892 ATXN8Q156A1 80 aa4.32□□□□□ -1.72
ATG4A-205ENST00000394892 C14orf132Q9NPU4 83 aa4.32□□□□□ -1.72
ATG4A-205ENST00000394892 C8orf17Q9NRJ1 99 aa4.32□□□□□ -1.72
ATG4A-205ENST00000394892 RBM12B-AS1Q9P1G2 102 aa4.32□□□□□ -1.72
ATG4A-205ENST00000394892 A8MWP4 228 aa4.31□□□□□ -1.72
ATG4A-205ENST00000394892 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
ATG4A-205ENST00000394892 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
ATG4A-205ENST00000394892 JMJD7-PLA2G4BH0Y9G9 81 aa4.29□□□□□ -1.72
ATG4A-205ENST00000394892 MMP24-AS1A0A0U1RRL7 71 aa4.28□□□□□ -1.72
ATG4A-205ENST00000394892 PRR15Q8IV56 129 aa4.28□□□□□ -1.72
ATG4A-205ENST00000394892 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
ATG4A-205ENST00000394892 A0A1B0GW54 56 aa4.27□□□□□ -1.73
ATG4A-205ENST00000394892 C4orf26Q17RF5 130 aa4.27□□□□□ -1.73
ATG4A-205ENST00000394892 Q6ZVQ6 151 aa4.27□□□□□ -1.73
ATG4A-205ENST00000394892 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
ATG4A-205ENST00000394892 MACF1Q9UPN3 7388 aaKnown RBP4.26□□□□□ -1.73
ATG4A-205ENST00000394892 TAX1BP3O14907 124 aa4.26□□□□□ -1.73
ATG4A-205ENST00000394892 NDUFB1O75438 58 aa4.26□□□□□ -1.73
ATG4A-205ENST00000394892 PDE6GP18545 87 aa4.25□□□□□ -1.73
ATG4A-205ENST00000394892 BATFQ16520 125 aa4.25□□□□□ -1.73
ATG4A-205ENST00000394892 COL5A1-AS1Q5SY13 56 aa4.25□□□□□ -1.73
ATG4A-205ENST00000394892 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
ATG4A-205ENST00000394892 K7EQZ3 153 aa4.24□□□□□ -1.73
ATG4A-205ENST00000394892 NREPQ16612 68 aa4.24□□□□□ -1.73
ATG4A-205ENST00000394892 Q5W150 140 aa4.23□□□□□ -1.73
ATG4A-205ENST00000394892 TMEM254Q8TBM7 123 aa4.23□□□□□ -1.73
ATG4A-205ENST00000394892 A0A1W2PPM0 123 aa4.22□□□□□ -1.73
ATG4A-205ENST00000394892 RPS28P62857 69 aaKnown RBP4.22□□□□□ -1.73
ATG4A-205ENST00000394892 MRPL34Q9BQ48 92 aaKnown RBP4.22□□□□□ -1.73
ATG4A-205ENST00000394892 H3BT86 120 aa4.21□□□□□ -1.74
ATG4A-205ENST00000394892 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
ATG4A-205ENST00000394892 hDV103S1A0JD37 113 aa4.2□□□□□ -1.74
ATG4A-205ENST00000394892 LYRM7Q5U5X0 104 aa4.2□□□□□ -1.74
ATG4A-205ENST00000394892 Q8N9L7 120 aa4.2□□□□□ -1.74
ATG4A-205ENST00000394892 KRTAP6-3Q3LI67 103 aa4.18□□□□□ -1.74
ATG4A-205ENST00000394892 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
ATG4A-205ENST00000394892 PRO0461Q9UI25 63 aa4.16□□□□□ -1.74
ATG4A-205ENST00000394892 BPY2O14599 106 aa4.15□□□□□ -1.75
ATG4A-205ENST00000394892 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
ATG4A-205ENST00000394892 NDUFS5O43920 106 aa4.14□□□□□ -1.75
ATG4A-205ENST00000394892 IGKV2-30P06310 120 aa4.14□□□□□ -1.75
ATG4A-205ENST00000394892 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms