RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 SZT2Q5T011 3432 aa8.39□□□□□ -1.07
LRRK1-201ENST00000388948 CELSR2Q9HCU4 2923 aa8.37□□□□□ -1.07
LRRK1-201ENST00000388948 CYSTM1Q9H1C7 97 aa8.37□□□□□ -1.07
LRRK1-201ENST00000388948 CFAP47Q6ZTR5 3102 aa8.36□□□□□ -1.07
LRRK1-201ENST00000388948 COL6A3P12111 3177 aa8.35□□□□□ -1.07
LRRK1-201ENST00000388948 KRTAP29-1A8MX34 341 aaPredicted RBP8.34□□□□□ -1.07
LRRK1-201ENST00000388948 ZZEF1O43149 2961 aa8.31□□□□□ -1.08
LRRK1-201ENST00000388948 ADGRG4Q8IZF6 3080 aa8.29□□□□□ -1.08
LRRK1-201ENST00000388948 NBEAQ8NFP9 2946 aa8.29□□□□□ -1.08
LRRK1-201ENST00000388948 TENM1Q9UKZ4 2725 aa8.28□□□□□ -1.08
LRRK1-201ENST00000388948 KRTAP7-1Q8IUC3 87 aa8.27□□□□□ -1.09
LRRK1-201ENST00000388948 DNAH14Q0VDD8 3507 aa8.26□□□□□ -1.09
LRRK1-201ENST00000388948 Q5XG85 94 aa8.25□□□□□ -1.09
LRRK1-201ENST00000388948 SPEGQ15772 3267 aa8.25□□□□□ -1.09
LRRK1-201ENST00000388948 NIPBLQ6KC79 2804 aaeCLIP8.24□□□□□ -1.09
LRRK1-201ENST00000388948 DCHS2Q6V1P9 2916 aa8.23□□□□□ -1.09
LRRK1-201ENST00000388948 KRTAP13-1Q8IUC0 172 aa8.22□□□□□ -1.09
LRRK1-201ENST00000388948 USP34Q70CQ2 3546 aa8.19□□□□□ -1.1
LRRK1-201ENST00000388948 A8MU10 97 aa8.19□□□□□ -1.1
LRRK1-201ENST00000388948 TENM3Q9P273 2699 aa8.18□□□□□ -1.1
LRRK1-201ENST00000388948 EYSQ5T1H1 3165 aa8.17□□□□□ -1.1
LRRK1-201ENST00000388948 A0A1B0GVY2 172 aa8.16□□□□□ -1.1
LRRK1-201ENST00000388948 TNP1P09430 55 aa8.16□□□□□ -1.1
LRRK1-201ENST00000388948 NF1P21359 2839 aa8.16□□□□□ -1.1
LRRK1-201ENST00000388948 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
LRRK1-201ENST00000388948 H3BS24 57 aa8.08□□□□□ -1.12
LRRK1-201ENST00000388948 TNRC18O15417 2968 aaPredicted RBP8.08□□□□□ -1.12
LRRK1-201ENST00000388948 XP32Q5T750 250 aa8.07□□□□□ -1.12
LRRK1-201ENST00000388948 ZANQ9Y493 2812 aa8.04□□□□□ -1.12
LRRK1-201ENST00000388948 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
LRRK1-201ENST00000388948 DMXL1Q9Y485 3027 aa8.01□□□□□ -1.13
LRRK1-201ENST00000388948 PKD1L1Q8TDX9 2849 aa8□□□□□ -1.13
LRRK1-201ENST00000388948 TENM2Q9NT68 2774 aa8□□□□□ -1.13
LRRK1-201ENST00000388948 TPRXLQ17RH7 258 aa7.98□□□□□ -1.13
LRRK1-201ENST00000388948 KRTAP1-4P0C5Y4 121 aa7.96□□□□□ -1.14
LRRK1-201ENST00000388948 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
LRRK1-201ENST00000388948 CELSR1Q9NYQ6 3014 aa7.9□□□□□ -1.15
LRRK1-201ENST00000388948 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.15
LRRK1-201ENST00000388948 SPTBN5Q9NRC6 3674 aaKnown RBP7.9□□□□□ -1.15
LRRK1-201ENST00000388948 KRTAP25-1Q3LHN0 102 aa7.9□□□□□ -1.15
LRRK1-201ENST00000388948 FBN2P35556 2912 aa7.89□□□□□ -1.15
LRRK1-201ENST00000388948 VWFP04275 2813 aa7.85□□□□□ -1.15
LRRK1-201ENST00000388948 MYO15AQ9UKN7 3530 aa7.78□□□□□ -1.16
LRRK1-201ENST00000388948 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
LRRK1-201ENST00000388948 PDZD2O15018 2839 aa7.75□□□□□ -1.17
LRRK1-201ENST00000388948 LOC400499M0QZD8 3231 aa7.75□□□□□ -1.17
LRRK1-201ENST00000388948 MXRA5Q9NR99 2828 aa7.73□□□□□ -1.17
LRRK1-201ENST00000388948 HRNRQ86YZ3 2850 aaPredicted RBP7.72□□□□□ -1.17
LRRK1-201ENST00000388948 PP632Q6XCG6 107 aa7.72□□□□□ -1.17
LRRK1-201ENST00000388948 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.18
LRRK1-201ENST00000388948 A6NN06 94 aa7.68□□□□□ -1.18
LRRK1-201ENST00000388948 NBPF19A0A087WUL8 3843 aa7.67□□□□□ -1.18
LRRK1-201ENST00000388948 NDUFAF8A1L188 74 aa7.67□□□□□ -1.18
LRRK1-201ENST00000388948 DCHS1Q96JQ0 3298 aa7.64□□□□□ -1.19
LRRK1-201ENST00000388948 TGP01266 2768 aa7.63□□□□□ -1.19
LRRK1-201ENST00000388948 WDFY3Q8IZQ1 3526 aa7.57□□□□□ -1.2
LRRK1-201ENST00000388948 SRRM2Q9UQ35 2752 aaKnown RBP7.56□□□□□ -1.2
LRRK1-201ENST00000388948 ZFHX3Q15911 3703 aa7.53□□□□□ -1.2
LRRK1-201ENST00000388948 P0C880 135 aa7.52□□□□□ -1.21
LRRK1-201ENST00000388948 RELNP78509 3460 aa7.5□□□□□ -1.21
LRRK1-201ENST00000388948 H0YAA0 97 aa7.49□□□□□ -1.21
LRRK1-201ENST00000388948 ASPMQ8IZT6 3477 aa7.49□□□□□ -1.21
LRRK1-201ENST00000388948 ZFHX4Q86UP3 3567 aa7.43□□□□□ -1.22
LRRK1-201ENST00000388948 FBN1P35555 2871 aaKnown RBP7.36□□□□□ -1.23
LRRK1-201ENST00000388948 LAMA5O15230 3695 aa7.28□□□□□ -1.24
LRRK1-201ENST00000388948 FBN3Q75N90 2809 aa7.24□□□□□ -1.25
LRRK1-201ENST00000388948 COL7A1Q02388 2944 aa7.22□□□□□ -1.25
LRRK1-201ENST00000388948 KRTAP12-2P59991 146 aa7.15□□□□□ -1.26
LRRK1-201ENST00000388948 OTOGQ6ZRI0 2925 aa7.13□□□□□ -1.27
LRRK1-201ENST00000388948 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
LRRK1-201ENST00000388948 MEGF8Q7Z7M0 2845 aa7.06□□□□□ -1.28
LRRK1-201ENST00000388948 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.29
LRRK1-201ENST00000388948 CSMD1Q96PZ7 3565 aa7□□□□□ -1.29
LRRK1-201ENST00000388948 KRTAP12-1P59990 96 aa6.99□□□□□ -1.29
LRRK1-201ENST00000388948 DMDP11532 3685 aa6.96□□□□□ -1.3
LRRK1-201ENST00000388948 CSMD2Q7Z408 3487 aa6.94□□□□□ -1.3
LRRK1-201ENST00000388948 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
LRRK1-201ENST00000388948 TRRAPQ9Y4A5 3859 aa6.91□□□□□ -1.3
LRRK1-201ENST00000388948 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.3
LRRK1-201ENST00000388948 KRTAP4-5Q9BYR2 181 aa6.89□□□□□ -1.31
LRRK1-201ENST00000388948 SMG1Q96Q15 3661 aaKnown RBP6.89□□□□□ -1.31
LRRK1-201ENST00000388948 CRCT1Q9UGL9 99 aa6.87□□□□□ -1.31
LRRK1-201ENST00000388948 CUBNO60494 3623 aa6.84□□□□□ -1.31
LRRK1-201ENST00000388948 MUC3AQ02505 3323 aa6.84□□□□□ -1.32
LRRK1-201ENST00000388948 ANK3Q12955 4377 aaKnown RBP6.81□□□□□ -1.32
LRRK1-201ENST00000388948 SPENQ96T58 3664 aaKnown RBP6.78□□□□□ -1.32
LRRK1-201ENST00000388948 SVEP1Q4LDE5 3571 aa6.75□□□□□ -1.33
LRRK1-201ENST00000388948 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
LRRK1-201ENST00000388948 KRTAP10-6P60371 365 aaPredicted RBP6.68□□□□□ -1.34
LRRK1-201ENST00000388948 KRTAP10-4P60372 401 aaPredicted RBP6.55□□□□□ -1.36
LRRK1-201ENST00000388948 HUWE1Q7Z6Z7 4374 aaKnown RBP6.51□□□□□ -1.37
LRRK1-201ENST00000388948 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.37
LRRK1-201ENST00000388948 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
LRRK1-201ENST00000388948 KRTAP3-3Q9BYR6 98 aa6.45□□□□□ -1.38
LRRK1-201ENST00000388948 KRTAP8-1Q8IUC2 63 aa6.44□□□□□ -1.38
LRRK1-201ENST00000388948 ALMS1Q8TCU4 4167 aa6.44□□□□□ -1.38
LRRK1-201ENST00000388948 VPS13CQ709C8 3753 aa6.41□□□□□ -1.38
LRRK1-201ENST00000388948 BSNQ9UPA5 3926 aa6.4□□□□□ -1.38
LRRK1-201ENST00000388948 KRTAP3-2Q9BYR7 98 aa6.4□□□□□ -1.39
LRRK1-201ENST00000388948 CSMD3Q7Z407 3707 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 693.7 ms