RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 CHD9Q3L8U1 2897 aa2.42□□□□□ -2.02
PTCD2-202ENST00000380639 SPEGQ15772 3267 aa2.42□□□□□ -2.02
PTCD2-202ENST00000380639 LAMA1P25391 3075 aa2.41□□□□□ -2.02
PTCD2-202ENST00000380639 DCHS1Q96JQ0 3298 aa2.41□□□□□ -2.02
PTCD2-202ENST00000380639 SETXQ7Z333 2677 aaKnown RBP2.41□□□□□ -2.02
PTCD2-202ENST00000380639 ITPR2Q14571 2701 aa2.4□□□□□ -2.03
PTCD2-202ENST00000380639 RELNP78509 3460 aa2.4□□□□□ -2.03
PTCD2-202ENST00000380639 ZFHX4Q86UP3 3567 aa2.4□□□□□ -2.03
PTCD2-202ENST00000380639 TNRC18O15417 2968 aaPredicted RBP2.39□□□□□ -2.03
PTCD2-202ENST00000380639 LAMA5O15230 3695 aa2.39□□□□□ -2.03
PTCD2-202ENST00000380639 KRTAP10-1P60331 282 aa2.39□□□□□ -2.03
PTCD2-202ENST00000380639 CRCT1Q9UGL9 99 aa2.39□□□□□ -2.03
PTCD2-202ENST00000380639 SMG1Q96Q15 3661 aaKnown RBP2.38□□□□□ -2.03
PTCD2-202ENST00000380639 DSPP15924 2871 aaKnown RBP2.38□□□□□ -2.03
PTCD2-202ENST00000380639 FLNBO75369 2602 aaKnown RBP2.38□□□□□ -2.03
PTCD2-202ENST00000380639 NBEAQ8NFP9 2946 aa2.38□□□□□ -2.03
PTCD2-202ENST00000380639 FRYLO94915 3013 aa2.38□□□□□ -2.03
PTCD2-202ENST00000380639 TACC2O95359 2948 aa2.38□□□□□ -2.03
PTCD2-202ENST00000380639 KALRNO60229 2985 aa2.38□□□□□ -2.03
PTCD2-202ENST00000380639 TENM3Q9P273 2699 aa2.37□□□□□ -2.03
PTCD2-202ENST00000380639 TRANK1O15050 2925 aa2.37□□□□□ -2.03
PTCD2-202ENST00000380639 ZNF292O60281 2723 aa2.37□□□□□ -2.03
PTCD2-202ENST00000380639 CFAP47Q6ZTR5 3102 aa2.37□□□□□ -2.03
PTCD2-202ENST00000380639 KRTAP1-3Q8IUG1 177 aa2.37□□□□□ -2.03
PTCD2-202ENST00000380639 KRTAP1-1Q07627 177 aa2.35□□□□□ -2.03
PTCD2-202ENST00000380639 ZZEF1O43149 2961 aa2.34□□□□□ -2.04
PTCD2-202ENST00000380639 CSMD1Q96PZ7 3565 aa2.34□□□□□ -2.04
PTCD2-202ENST00000380639 SRRM2Q9UQ35 2752 aaKnown RBP2.34□□□□□ -2.04
PTCD2-202ENST00000380639 FREM2Q5SZK8 3169 aa2.33□□□□□ -2.04
PTCD2-202ENST00000380639 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
PTCD2-202ENST00000380639 KRTAP10-2P60368 255 aa2.33□□□□□ -2.04
PTCD2-202ENST00000380639 AKAP9Q99996 3911 aa2.33□□□□□ -2.04
PTCD2-202ENST00000380639 WDFY4Q6ZS81 3184 aa2.32□□□□□ -2.04
PTCD2-202ENST00000380639 DMXL1Q9Y485 3027 aa2.32□□□□□ -2.04
PTCD2-202ENST00000380639 CHD7Q9P2D1 2997 aa2.31□□□□□ -2.04
PTCD2-202ENST00000380639 BOD1L1Q8NFC6 3051 aa2.31□□□□□ -2.04
PTCD2-202ENST00000380639 LOC400499M0QZD8 3231 aa2.3□□□□□ -2.04
PTCD2-202ENST00000380639 KRTAP10-5P60370 271 aa2.3□□□□□ -2.04
PTCD2-202ENST00000380639 HIVEP1P15822 2718 aa2.3□□□□□ -2.04
PTCD2-202ENST00000380639 HTTP42858 3142 aa2.3□□□□□ -2.04
PTCD2-202ENST00000380639 MAP1AP78559 2803 aaPredicted RBP2.3□□□□□ -2.04
PTCD2-202ENST00000380639 KMT2BQ9UMN6 2715 aaPredicted RBP2.29□□□□□ -2.04
PTCD2-202ENST00000380639 LRBAP50851 2863 aa2.28□□□□□ -2.04
PTCD2-202ENST00000380639 NBPF19A0A087WUL8 3843 aa2.28□□□□□ -2.04
PTCD2-202ENST00000380639 VPS13CQ709C8 3753 aa2.28□□□□□ -2.04
PTCD2-202ENST00000380639 ITPR1Q14643 2758 aa2.28□□□□□ -2.04
PTCD2-202ENST00000380639 APCP25054 2843 aa2.27□□□□□ -2.05
PTCD2-202ENST00000380639 KRTAP1-5Q9BYS1 174 aa2.27□□□□□ -2.05
PTCD2-202ENST00000380639 FLNAP21333 2647 aaKnown RBP2.27□□□□□ -2.05
PTCD2-202ENST00000380639 MUC3AQ02505 3323 aa2.26□□□□□ -2.05
PTCD2-202ENST00000380639 DMXL2Q8TDJ6 3036 aa2.25□□□□□ -2.05
PTCD2-202ENST00000380639 ATMQ13315 3056 aa2.24□□□□□ -2.05
PTCD2-202ENST00000380639 COL12A1Q99715 3063 aa2.24□□□□□ -2.05
PTCD2-202ENST00000380639 SVEP1Q4LDE5 3571 aa2.24□□□□□ -2.05
PTCD2-202ENST00000380639 CSMD2Q7Z408 3487 aa2.23□□□□□ -2.05
PTCD2-202ENST00000380639 KRTAP19-4Q3LI73 84 aa2.23□□□□□ -2.05
PTCD2-202ENST00000380639 ASH1LQ9NR48 2969 aaKnown RBP2.23□□□□□ -2.05
PTCD2-202ENST00000380639 EYSQ5T1H1 3165 aa2.22□□□□□ -2.05
PTCD2-202ENST00000380639 MT3P25713 68 aa2.21□□□□□ -2.06
PTCD2-202ENST00000380639 KRTAP13-1Q8IUC0 172 aa2.21□□□□□ -2.06
PTCD2-202ENST00000380639 TEX15Q9BXT5 2789 aa2.21□□□□□ -2.06
PTCD2-202ENST00000380639 CRYBG3Q68DQ2 2970 aa2.2□□□□□ -2.06
PTCD2-202ENST00000380639 KRTAP7-1Q8IUC3 87 aa2.2□□□□□ -2.06
PTCD2-202ENST00000380639 KRTAP10-4P60372 401 aaPredicted RBP2.2□□□□□ -2.06
PTCD2-202ENST00000380639 KRTAP3-3Q9BYR6 98 aa2.19□□□□□ -2.06
PTCD2-202ENST00000380639 KRTAP3-2Q9BYR7 98 aa2.19□□□□□ -2.06
PTCD2-202ENST00000380639 ADGRG4Q8IZF6 3080 aa2.18□□□□□ -2.06
PTCD2-202ENST00000380639 BSNQ9UPA5 3926 aa2.18□□□□□ -2.06
PTCD2-202ENST00000380639 CELSR1Q9NYQ6 3014 aa2.17□□□□□ -2.06
PTCD2-202ENST00000380639 TGP01266 2768 aa2.17□□□□□ -2.06
PTCD2-202ENST00000380639 CUBNO60494 3623 aa2.16□□□□□ -2.06
PTCD2-202ENST00000380639 KRTAP13-3Q3SY46 172 aa2.16□□□□□ -2.06
PTCD2-202ENST00000380639 TENM2Q9NT68 2774 aa2.16□□□□□ -2.06
PTCD2-202ENST00000380639 KRTAP10-12P60413 245 aa2.14□□□□□ -2.07
PTCD2-202ENST00000380639 TENM1Q9UKZ4 2725 aa2.14□□□□□ -2.07
PTCD2-202ENST00000380639 MEGF8Q7Z7M0 2845 aa2.14□□□□□ -2.07
PTCD2-202ENST00000380639 KRTAP21-3Q3LHN1 58 aa2.13□□□□□ -2.07
PTCD2-202ENST00000380639 ALMS1Q8TCU4 4167 aa2.12□□□□□ -2.07
PTCD2-202ENST00000380639 TRRAPQ9Y4A5 3859 aa2.12□□□□□ -2.07
PTCD2-202ENST00000380639 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
PTCD2-202ENST00000380639 CELSR2Q9HCU4 2923 aa2.1□□□□□ -2.07
PTCD2-202ENST00000380639 NBEAL2Q6ZNJ1 2754 aa2.1□□□□□ -2.07
PTCD2-202ENST00000380639 DCHS2Q6V1P9 2916 aa2.08□□□□□ -2.08
PTCD2-202ENST00000380639 PDZD2O15018 2839 aa2.08□□□□□ -2.08
PTCD2-202ENST00000380639 OTOGQ6ZRI0 2925 aa2.08□□□□□ -2.08
PTCD2-202ENST00000380639 HRNRQ86YZ3 2850 aaPredicted RBP2.07□□□□□ -2.08
PTCD2-202ENST00000380639 KRTAP3-1Q9BYR8 98 aa2.07□□□□□ -2.08
PTCD2-202ENST00000380639 NF1P21359 2839 aa2.06□□□□□ -2.08
PTCD2-202ENST00000380639 LYSTQ99698 3801 aa2.06□□□□□ -2.08
PTCD2-202ENST00000380639 CSMD3Q7Z407 3707 aa2.03□□□□□ -2.08
PTCD2-202ENST00000380639 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
PTCD2-202ENST00000380639 MXRA5Q9NR99 2828 aa2.01□□□□□ -2.09
PTCD2-202ENST00000380639 NIPBLQ6KC79 2804 aaeCLIP2.01□□□□□ -2.09
PTCD2-202ENST00000380639 FBN1P35555 2871 aaKnown RBP2□□□□□ -2.09
PTCD2-202ENST00000380639 FBN2P35556 2912 aa1.99□□□□□ -2.09
PTCD2-202ENST00000380639 ANK2Q01484 3957 aa1.98□□□□□ -2.09
PTCD2-202ENST00000380639 KRTAP1-4P0C5Y4 121 aa1.98□□□□□ -2.09
PTCD2-202ENST00000380639 FLNCQ14315 2725 aa1.98□□□□□ -2.09
PTCD2-202ENST00000380639 PKD1L1Q8TDX9 2849 aa1.97□□□□□ -2.09
PTCD2-202ENST00000380639 CMYA5Q8N3K9 4069 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms