RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 LAMA1P25391 3075 aa5.4□□□□□ -1.54
SCAF11-202ENST00000369367 KRTAP1-4P0C5Y4 121 aa5.39□□□□□ -1.55
SCAF11-202ENST00000369367 TENM3Q9P273 2699 aa5.39□□□□□ -1.55
SCAF11-202ENST00000369367 KALRNO60229 2985 aa5.39□□□□□ -1.55
SCAF11-202ENST00000369367 DCHS2Q6V1P9 2916 aa5.39□□□□□ -1.55
SCAF11-202ENST00000369367 XP32Q5T750 250 aa5.37□□□□□ -1.55
SCAF11-202ENST00000369367 UNC80Q8N2C7 3258 aa5.37□□□□□ -1.55
SCAF11-202ENST00000369367 ZANQ9Y493 2812 aa5.36□□□□□ -1.55
SCAF11-202ENST00000369367 NF1P21359 2839 aa5.36□□□□□ -1.55
SCAF11-202ENST00000369367 ADGRG4Q8IZF6 3080 aa5.36□□□□□ -1.55
SCAF11-202ENST00000369367 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
SCAF11-202ENST00000369367 CYSTM1Q9H1C7 97 aa5.35□□□□□ -1.55
SCAF11-202ENST00000369367 CDH23Q9H251 3354 aa5.33□□□□□ -1.56
SCAF11-202ENST00000369367 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
SCAF11-202ENST00000369367 TNP1P09430 55 aa5.3□□□□□ -1.56
SCAF11-202ENST00000369367 MXRA5Q9NR99 2828 aa5.3□□□□□ -1.56
SCAF11-202ENST00000369367 ASH1LQ9NR48 2969 aaKnown RBP5.29□□□□□ -1.56
SCAF11-202ENST00000369367 BOD1L1Q8NFC6 3051 aa5.29□□□□□ -1.56
SCAF11-202ENST00000369367 A0A1B0GVY2 172 aa5.29□□□□□ -1.56
SCAF11-202ENST00000369367 TENM2Q9NT68 2774 aa5.26□□□□□ -1.57
SCAF11-202ENST00000369367 COL6A3P12111 3177 aa5.26□□□□□ -1.57
SCAF11-202ENST00000369367 SZT2Q5T011 3432 aa5.26□□□□□ -1.57
SCAF11-202ENST00000369367 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
SCAF11-202ENST00000369367 HRNRQ86YZ3 2850 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-202ENST00000369367 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
SCAF11-202ENST00000369367 KRTAP10-8P60410 259 aa5.23□□□□□ -1.57
SCAF11-202ENST00000369367 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
SCAF11-202ENST00000369367 DMXL1Q9Y485 3027 aa5.22□□□□□ -1.57
SCAF11-202ENST00000369367 CELSR3Q9NYQ7 3312 aa5.21□□□□□ -1.58
SCAF11-202ENST00000369367 KRTAP10-10P60014 251 aa5.19□□□□□ -1.58
SCAF11-202ENST00000369367 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
SCAF11-202ENST00000369367 A8MU10 97 aa5.16□□□□□ -1.58
SCAF11-202ENST00000369367 USP34Q70CQ2 3546 aa5.16□□□□□ -1.58
SCAF11-202ENST00000369367 FBN2P35556 2912 aa5.14□□□□□ -1.59
SCAF11-202ENST00000369367 VCANP13611 3396 aa5.12□□□□□ -1.59
SCAF11-202ENST00000369367 PKD1L1Q8TDX9 2849 aa5.12□□□□□ -1.59
SCAF11-202ENST00000369367 KRTAP16-1A8MUX0 517 aa5.11□□□□□ -1.59
SCAF11-202ENST00000369367 CELSR1Q9NYQ6 3014 aa5.1□□□□□ -1.59
SCAF11-202ENST00000369367 FREM2Q5SZK8 3169 aa5.09□□□□□ -1.59
SCAF11-202ENST00000369367 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
SCAF11-202ENST00000369367 PDZD2O15018 2839 aa5.07□□□□□ -1.6
SCAF11-202ENST00000369367 CFAP47Q6ZTR5 3102 aa5.04□□□□□ -1.6
SCAF11-202ENST00000369367 TGP01266 2768 aa5.04□□□□□ -1.6
SCAF11-202ENST00000369367 A6NN06 94 aa5□□□□□ -1.61
SCAF11-202ENST00000369367 VWFP04275 2813 aa4.98□□□□□ -1.61
SCAF11-202ENST00000369367 SPEGQ15772 3267 aa4.94□□□□□ -1.62
SCAF11-202ENST00000369367 SPTBN5Q9NRC6 3674 aaKnown RBP4.93□□□□□ -1.62
SCAF11-202ENST00000369367 OTOGQ6ZRI0 2925 aa4.93□□□□□ -1.62
SCAF11-202ENST00000369367 DNAH14Q0VDD8 3507 aa4.92□□□□□ -1.62
SCAF11-202ENST00000369367 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
SCAF11-202ENST00000369367 H0YAA0 97 aa4.9□□□□□ -1.63
SCAF11-202ENST00000369367 LOC400499M0QZD8 3231 aa4.89□□□□□ -1.63
SCAF11-202ENST00000369367 P0C880 135 aa4.87□□□□□ -1.63
SCAF11-202ENST00000369367 DCHS1Q96JQ0 3298 aa4.82□□□□□ -1.64
SCAF11-202ENST00000369367 H3BS24 57 aa4.8□□□□□ -1.64
SCAF11-202ENST00000369367 FBN1P35555 2871 aaKnown RBP4.8□□□□□ -1.64
SCAF11-202ENST00000369367 FBN3Q75N90 2809 aa4.79□□□□□ -1.64
SCAF11-202ENST00000369367 SRRM2Q9UQ35 2752 aaKnown RBP4.79□□□□□ -1.64
SCAF11-202ENST00000369367 MT1HL1P0DM35 61 aa4.76□□□□□ -1.65
SCAF11-202ENST00000369367 NBPF19A0A087WUL8 3843 aa4.74□□□□□ -1.65
SCAF11-202ENST00000369367 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
SCAF11-202ENST00000369367 MYO15AQ9UKN7 3530 aa4.71□□□□□ -1.66
SCAF11-202ENST00000369367 KRTAP13-4Q3LI77 160 aa4.7□□□□□ -1.66
SCAF11-202ENST00000369367 ZFHX3Q15911 3703 aa4.69□□□□□ -1.66
SCAF11-202ENST00000369367 RELNP78509 3460 aa4.65□□□□□ -1.66
SCAF11-202ENST00000369367 MEGF8Q7Z7M0 2845 aa4.62□□□□□ -1.67
SCAF11-202ENST00000369367 COL7A1Q02388 2944 aa4.61□□□□□ -1.67
SCAF11-202ENST00000369367 WDFY3Q8IZQ1 3526 aa4.61□□□□□ -1.67
SCAF11-202ENST00000369367 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
SCAF11-202ENST00000369367 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
SCAF11-202ENST00000369367 KRTAP10-4P60372 401 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-202ENST00000369367 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
SCAF11-202ENST00000369367 ANK3Q12955 4377 aaKnown RBP4.59□□□□□ -1.68
SCAF11-202ENST00000369367 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
SCAF11-202ENST00000369367 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
SCAF11-202ENST00000369367 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-202ENST00000369367 ZFHX4Q86UP3 3567 aa4.46□□□□□ -1.7
SCAF11-202ENST00000369367 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
SCAF11-202ENST00000369367 LAMA5O15230 3695 aa4.44□□□□□ -1.7
SCAF11-202ENST00000369367 KRTAP10-12P60413 245 aa4.41□□□□□ -1.7
SCAF11-202ENST00000369367 TRRAPQ9Y4A5 3859 aa4.4□□□□□ -1.7
SCAF11-202ENST00000369367 ASPMQ8IZT6 3477 aa4.4□□□□□ -1.71
SCAF11-202ENST00000369367 KRTAP3-3Q9BYR6 98 aa4.34□□□□□ -1.71
SCAF11-202ENST00000369367 HUWE1Q7Z6Z7 4374 aaKnown RBP4.33□□□□□ -1.72
SCAF11-202ENST00000369367 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
SCAF11-202ENST00000369367 KRTAP3-2Q9BYR7 98 aa4.31□□□□□ -1.72
SCAF11-202ENST00000369367 MUC3AQ02505 3323 aa4.28□□□□□ -1.72
SCAF11-202ENST00000369367 SMG1Q96Q15 3661 aaKnown RBP4.28□□□□□ -1.72
SCAF11-202ENST00000369367 CSMD1Q96PZ7 3565 aa4.27□□□□□ -1.73
SCAF11-202ENST00000369367 CSMD2Q7Z408 3487 aa4.26□□□□□ -1.73
SCAF11-202ENST00000369367 DNAH1Q9P2D7 4330 aa4.25□□□□□ -1.73
SCAF11-202ENST00000369367 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
SCAF11-202ENST00000369367 DMDP11532 3685 aa4.22□□□□□ -1.73
SCAF11-202ENST00000369367 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
SCAF11-202ENST00000369367 CUBNO60494 3623 aa4.19□□□□□ -1.74
SCAF11-202ENST00000369367 SPENQ96T58 3664 aaKnown RBP4.18□□□□□ -1.74
SCAF11-202ENST00000369367 DNAH9Q9NYC9 4486 aa4.15□□□□□ -1.75
SCAF11-202ENST00000369367 MT1HP80294 61 aa4.14□□□□□ -1.75
SCAF11-202ENST00000369367 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
SCAF11-202ENST00000369367 DNAH11Q96DT5 4516 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms