RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 CHD9Q3L8U1 2897 aa5.26□□□□□ -1.57
SIM1-202ENST00000369208 MKI67P46013 3256 aaKnown RBP5.25□□□□□ -1.57
SIM1-202ENST00000369208 TGP01266 2768 aa5.24□□□□□ -1.57
SIM1-202ENST00000369208 NBEAQ8NFP9 2946 aa5.23□□□□□ -1.57
SIM1-202ENST00000369208 REV3LO60673 3130 aa5.22□□□□□ -1.57
SIM1-202ENST00000369208 DNAH14Q0VDD8 3507 aa5.22□□□□□ -1.57
SIM1-202ENST00000369208 KRTAP1-4P0C5Y4 121 aa5.22□□□□□ -1.57
SIM1-202ENST00000369208 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.57
SIM1-202ENST00000369208 BRCA2P51587 3418 aa5.21□□□□□ -1.57
SIM1-202ENST00000369208 SRRM2Q9UQ35 2752 aaKnown RBP5.21□□□□□ -1.58
SIM1-202ENST00000369208 CELSR3Q9NYQ7 3312 aa5.21□□□□□ -1.58
SIM1-202ENST00000369208 A0A1B0GVY2 172 aa5.21□□□□□ -1.58
SIM1-202ENST00000369208 NIPBLQ6KC79 2804 aaeCLIP5.19□□□□□ -1.58
SIM1-202ENST00000369208 FRYLO94915 3013 aa5.19□□□□□ -1.58
SIM1-202ENST00000369208 TRIOO75962 3097 aa5.18□□□□□ -1.58
SIM1-202ENST00000369208 CDH23Q9H251 3354 aa5.17□□□□□ -1.58
SIM1-202ENST00000369208 TACC2O95359 2948 aa5.17□□□□□ -1.58
SIM1-202ENST00000369208 RANBP2P49792 3224 aaKnown RBP5.17□□□□□ -1.58
SIM1-202ENST00000369208 TENM1Q9UKZ4 2725 aa5.16□□□□□ -1.58
SIM1-202ENST00000369208 PRUNE2Q8WUY3 3088 aa5.15□□□□□ -1.58
SIM1-202ENST00000369208 TNRC18O15417 2968 aaPredicted RBP5.15□□□□□ -1.59
SIM1-202ENST00000369208 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.59
SIM1-202ENST00000369208 HTTP42858 3142 aa5.15□□□□□ -1.59
SIM1-202ENST00000369208 CRYBG3Q68DQ2 2970 aa5.14□□□□□ -1.59
SIM1-202ENST00000369208 ZZEF1O43149 2961 aa5.13□□□□□ -1.59
SIM1-202ENST00000369208 VPS13AQ96RL7 3174 aa5.12□□□□□ -1.59
SIM1-202ENST00000369208 LAMA3Q16787 3333 aa5.12□□□□□ -1.59
SIM1-202ENST00000369208 SZT2Q5T011 3432 aa5.11□□□□□ -1.59
SIM1-202ENST00000369208 TENM3Q9P273 2699 aa5.09□□□□□ -1.59
SIM1-202ENST00000369208 FREM2Q5SZK8 3169 aa5.09□□□□□ -1.59
SIM1-202ENST00000369208 ASH1LQ9NR48 2969 aaKnown RBP5.08□□□□□ -1.6
SIM1-202ENST00000369208 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
SIM1-202ENST00000369208 WDFY4Q6ZS81 3184 aa5.06□□□□□ -1.6
SIM1-202ENST00000369208 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
SIM1-202ENST00000369208 COL12A1Q99715 3063 aa5.03□□□□□ -1.6
SIM1-202ENST00000369208 LAMA1P25391 3075 aa5□□□□□ -1.61
SIM1-202ENST00000369208 DMXL1Q9Y485 3027 aa4.99□□□□□ -1.61
SIM1-202ENST00000369208 NF1P21359 2839 aa4.98□□□□□ -1.61
SIM1-202ENST00000369208 CELSR2Q9HCU4 2923 aa4.97□□□□□ -1.61
SIM1-202ENST00000369208 PDZD2O15018 2839 aa4.97□□□□□ -1.61
SIM1-202ENST00000369208 VCANP13611 3396 aa4.94□□□□□ -1.62
SIM1-202ENST00000369208 USP34Q70CQ2 3546 aa4.93□□□□□ -1.62
SIM1-202ENST00000369208 SPTBN5Q9NRC6 3674 aaKnown RBP4.92□□□□□ -1.62
SIM1-202ENST00000369208 SPEGQ15772 3267 aa4.92□□□□□ -1.62
SIM1-202ENST00000369208 ALMS1Q8TCU4 4167 aa4.91□□□□□ -1.62
SIM1-202ENST00000369208 UNC80Q8N2C7 3258 aa4.91□□□□□ -1.62
SIM1-202ENST00000369208 DCHS2Q6V1P9 2916 aa4.91□□□□□ -1.62
SIM1-202ENST00000369208 TENM2Q9NT68 2774 aa4.9□□□□□ -1.62
SIM1-202ENST00000369208 WDFY3Q8IZQ1 3526 aa4.9□□□□□ -1.63
SIM1-202ENST00000369208 MYO15AQ9UKN7 3530 aa4.88□□□□□ -1.63
SIM1-202ENST00000369208 DMXL2Q8TDJ6 3036 aa4.88□□□□□ -1.63
SIM1-202ENST00000369208 COL6A3P12111 3177 aa4.88□□□□□ -1.63
SIM1-202ENST00000369208 ATMQ13315 3056 aa4.86□□□□□ -1.63
SIM1-202ENST00000369208 CFAP47Q6ZTR5 3102 aa4.81□□□□□ -1.64
SIM1-202ENST00000369208 ASPMQ8IZT6 3477 aa4.8□□□□□ -1.64
SIM1-202ENST00000369208 KRTAP10-6P60371 365 aaPredicted RBP4.79□□□□□ -1.64
SIM1-202ENST00000369208 ADGRG4Q8IZF6 3080 aa4.79□□□□□ -1.64
SIM1-202ENST00000369208 MXRA5Q9NR99 2828 aa4.78□□□□□ -1.64
SIM1-202ENST00000369208 PKD1L1Q8TDX9 2849 aa4.75□□□□□ -1.65
SIM1-202ENST00000369208 HRNRQ86YZ3 2850 aaPredicted RBP4.75□□□□□ -1.65
SIM1-202ENST00000369208 ZANQ9Y493 2812 aa4.75□□□□□ -1.65
SIM1-202ENST00000369208 EYSQ5T1H1 3165 aa4.73□□□□□ -1.65
SIM1-202ENST00000369208 BOD1L1Q8NFC6 3051 aa4.72□□□□□ -1.65
SIM1-202ENST00000369208 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.66
SIM1-202ENST00000369208 LAMA5O15230 3695 aa4.7□□□□□ -1.66
SIM1-202ENST00000369208 CELSR1Q9NYQ6 3014 aa4.7□□□□□ -1.66
SIM1-202ENST00000369208 FBN2P35556 2912 aa4.69□□□□□ -1.66
SIM1-202ENST00000369208 VWFP04275 2813 aa4.68□□□□□ -1.66
SIM1-202ENST00000369208 NBPF19A0A087WUL8 3843 aa4.63□□□□□ -1.67
SIM1-202ENST00000369208 DCHS1Q96JQ0 3298 aa4.62□□□□□ -1.67
SIM1-202ENST00000369208 LOC400499M0QZD8 3231 aa4.59□□□□□ -1.67
SIM1-202ENST00000369208 KRTAP3-2Q9BYR7 98 aa4.56□□□□□ -1.68
SIM1-202ENST00000369208 RELNP78509 3460 aa4.56□□□□□ -1.68
SIM1-202ENST00000369208 FBN3Q75N90 2809 aa4.56□□□□□ -1.68
SIM1-202ENST00000369208 COL7A1Q02388 2944 aa4.55□□□□□ -1.68
SIM1-202ENST00000369208 SPENQ96T58 3664 aaKnown RBP4.53□□□□□ -1.68
SIM1-202ENST00000369208 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
SIM1-202ENST00000369208 ZFHX4Q86UP3 3567 aa4.52□□□□□ -1.69
SIM1-202ENST00000369208 MEGF8Q7Z7M0 2845 aa4.5□□□□□ -1.69
SIM1-202ENST00000369208 CSMD1Q96PZ7 3565 aa4.48□□□□□ -1.69
SIM1-202ENST00000369208 OTOGQ6ZRI0 2925 aa4.48□□□□□ -1.69
SIM1-202ENST00000369208 MT1HL1P0DM35 61 aa4.47□□□□□ -1.69
SIM1-202ENST00000369208 KRTAP3-3Q9BYR6 98 aa4.45□□□□□ -1.7
SIM1-202ENST00000369208 DMDP11532 3685 aa4.43□□□□□ -1.7
SIM1-202ENST00000369208 SMG1Q96Q15 3661 aaKnown RBP4.42□□□□□ -1.7
SIM1-202ENST00000369208 AKAP9Q99996 3911 aa4.4□□□□□ -1.71
SIM1-202ENST00000369208 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
SIM1-202ENST00000369208 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
SIM1-202ENST00000369208 CUBNO60494 3623 aa4.3□□□□□ -1.72
SIM1-202ENST00000369208 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
SIM1-202ENST00000369208 FBN1P35555 2871 aaKnown RBP4.27□□□□□ -1.73
SIM1-202ENST00000369208 SVEP1Q4LDE5 3571 aa4.27□□□□□ -1.73
SIM1-202ENST00000369208 MUC3AQ02505 3323 aa4.27□□□□□ -1.73
SIM1-202ENST00000369208 KRTAP4-5Q9BYR2 181 aa4.23□□□□□ -1.73
SIM1-202ENST00000369208 KRTAP10-4P60372 401 aaPredicted RBP4.23□□□□□ -1.73
SIM1-202ENST00000369208 CSMD2Q7Z408 3487 aa4.19□□□□□ -1.74
SIM1-202ENST00000369208 CMYA5Q8N3K9 4069 aa4.18□□□□□ -1.74
SIM1-202ENST00000369208 TRRAPQ9Y4A5 3859 aa4.15□□□□□ -1.75
SIM1-202ENST00000369208 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
SIM1-202ENST00000369208 VPS13CQ709C8 3753 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms