RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 RANBP2P49792 3224 aaKnown RBP10.51□□□□□ -0.73
SMURF1-202ENST00000361368 P0C880 135 aa10.5□□□□□ -0.73
SMURF1-202ENST00000361368 TENM4Q6N022 2769 aa10.48□□□□□ -0.73
SMURF1-202ENST00000361368 H0YAA0 97 aa10.48□□□□□ -0.73
SMURF1-202ENST00000361368 REV3LO60673 3130 aa10.45□□□□□ -0.74
SMURF1-202ENST00000361368 SPEGQ15772 3267 aa10.44□□□□□ -0.74
SMURF1-202ENST00000361368 SZT2Q5T011 3432 aa10.42□□□□□ -0.74
SMURF1-202ENST00000361368 HIVEP1P15822 2718 aa10.4□□□□□ -0.74
SMURF1-202ENST00000361368 MYO15AQ9UKN7 3530 aa10.39□□□□□ -0.75
SMURF1-202ENST00000361368 APCP25054 2843 aa10.38□□□□□ -0.75
SMURF1-202ENST00000361368 UTP20O75691 2785 aaKnown RBP10.36□□□□□ -0.75
SMURF1-202ENST00000361368 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
SMURF1-202ENST00000361368 TRIOO75962 3097 aa10.33□□□□□ -0.76
SMURF1-202ENST00000361368 EYSQ5T1H1 3165 aa10.31□□□□□ -0.76
SMURF1-202ENST00000361368 LAMA1P25391 3075 aa10.31□□□□□ -0.76
SMURF1-202ENST00000361368 SPTBN5Q9NRC6 3674 aaKnown RBP10.29□□□□□ -0.76
SMURF1-202ENST00000361368 PRUNE2Q8WUY3 3088 aa10.24□□□□□ -0.77
SMURF1-202ENST00000361368 NIPBLQ6KC79 2804 aaeCLIP10.23□□□□□ -0.77
SMURF1-202ENST00000361368 FLNCQ14315 2725 aa10.19□□□□□ -0.78
SMURF1-202ENST00000361368 TACC2O95359 2948 aa10.17□□□□□ -0.78
SMURF1-202ENST00000361368 WDFY3Q8IZQ1 3526 aa10.09□□□□□ -0.79
SMURF1-202ENST00000361368 VPS13AQ96RL7 3174 aa10.07□□□□□ -0.8
SMURF1-202ENST00000361368 CRYBG3Q68DQ2 2970 aa10.07□□□□□ -0.8
SMURF1-202ENST00000361368 LRBAP50851 2863 aa10.05□□□□□ -0.8
SMURF1-202ENST00000361368 CELSR3Q9NYQ7 3312 aa10.05□□□□□ -0.8
SMURF1-202ENST00000361368 NBEAQ8NFP9 2946 aa10.02□□□□□ -0.81
SMURF1-202ENST00000361368 KALRNO60229 2985 aa9.97□□□□□ -0.81
SMURF1-202ENST00000361368 ATMQ13315 3056 aa9.96□□□□□ -0.81
SMURF1-202ENST00000361368 FRYLO94915 3013 aa9.96□□□□□ -0.81
SMURF1-202ENST00000361368 TENM3Q9P273 2699 aa9.95□□□□□ -0.82
SMURF1-202ENST00000361368 KRTAP13-4Q3LI77 160 aa9.95□□□□□ -0.82
SMURF1-202ENST00000361368 DMXL2Q8TDJ6 3036 aa9.94□□□□□ -0.82
SMURF1-202ENST00000361368 ASH1LQ9NR48 2969 aaKnown RBP9.94□□□□□ -0.82
SMURF1-202ENST00000361368 COL12A1Q99715 3063 aa9.94□□□□□ -0.82
SMURF1-202ENST00000361368 FREM2Q5SZK8 3169 aa9.93□□□□□ -0.82
SMURF1-202ENST00000361368 KRTAP12-2P59991 146 aa9.89□□□□□ -0.83
SMURF1-202ENST00000361368 TENM1Q9UKZ4 2725 aa9.89□□□□□ -0.83
SMURF1-202ENST00000361368 CELSR2Q9HCU4 2923 aa9.89□□□□□ -0.83
SMURF1-202ENST00000361368 TENM2Q9NT68 2774 aa9.82□□□□□ -0.84
SMURF1-202ENST00000361368 DMDP11532 3685 aa9.8□□□□□ -0.84
SMURF1-202ENST00000361368 DCHS2Q6V1P9 2916 aa9.8□□□□□ -0.84
SMURF1-202ENST00000361368 KRTAP12-1P59990 96 aa9.74□□□□□ -0.85
SMURF1-202ENST00000361368 MUC3AQ02505 3323 aa9.67□□□□□ -0.86
SMURF1-202ENST00000361368 TGP01266 2768 aa9.66□□□□□ -0.86
SMURF1-202ENST00000361368 KRTAP15-1Q3LI76 137 aa9.66□□□□□ -0.86
SMURF1-202ENST00000361368 ZZEF1O43149 2961 aa9.64□□□□□ -0.87
SMURF1-202ENST00000361368 COL6A3P12111 3177 aa9.63□□□□□ -0.87
SMURF1-202ENST00000361368 NF1P21359 2839 aa9.62□□□□□ -0.87
SMURF1-202ENST00000361368 ADGRG4Q8IZF6 3080 aa9.59□□□□□ -0.87
SMURF1-202ENST00000361368 LOC400499M0QZD8 3231 aa9.57□□□□□ -0.88
SMURF1-202ENST00000361368 ASPMQ8IZT6 3477 aa9.55□□□□□ -0.88
SMURF1-202ENST00000361368 KRTAP3-1Q9BYR8 98 aa9.53□□□□□ -0.88
SMURF1-202ENST00000361368 ZFHX4Q86UP3 3567 aa9.52□□□□□ -0.89
SMURF1-202ENST00000361368 ZANQ9Y493 2812 aa9.48□□□□□ -0.89
SMURF1-202ENST00000361368 BOD1L1Q8NFC6 3051 aa9.47□□□□□ -0.89
SMURF1-202ENST00000361368 CFAP47Q6ZTR5 3102 aa9.44□□□□□ -0.9
SMURF1-202ENST00000361368 DCHS1Q96JQ0 3298 aa9.41□□□□□ -0.9
SMURF1-202ENST00000361368 SPENQ96T58 3664 aaKnown RBP9.41□□□□□ -0.9
SMURF1-202ENST00000361368 TNRC18O15417 2968 aaPredicted RBP9.39□□□□□ -0.91
SMURF1-202ENST00000361368 SMG1Q96Q15 3661 aaKnown RBP9.38□□□□□ -0.91
SMURF1-202ENST00000361368 PDZD2O15018 2839 aa9.34□□□□□ -0.91
SMURF1-202ENST00000361368 LAMA5O15230 3695 aa9.32□□□□□ -0.92
SMURF1-202ENST00000361368 KRTAP10-6P60371 365 aaPredicted RBP9.31□□□□□ -0.92
SMURF1-202ENST00000361368 HRNRQ86YZ3 2850 aaPredicted RBP9.31□□□□□ -0.92
SMURF1-202ENST00000361368 PKD1L1Q8TDX9 2849 aa9.28□□□□□ -0.92
SMURF1-202ENST00000361368 MXRA5Q9NR99 2828 aa9.28□□□□□ -0.92
SMURF1-202ENST00000361368 CELSR1Q9NYQ6 3014 aa9.28□□□□□ -0.92
SMURF1-202ENST00000361368 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
SMURF1-202ENST00000361368 FBN2P35556 2912 aa9.23□□□□□ -0.93
SMURF1-202ENST00000361368 MT1HL1P0DM35 61 aa9.2□□□□□ -0.94
SMURF1-202ENST00000361368 KRTAP10-12P60413 245 aa9.19□□□□□ -0.94
SMURF1-202ENST00000361368 CSMD1Q96PZ7 3565 aa9.14□□□□□ -0.95
SMURF1-202ENST00000361368 VWFP04275 2813 aa9.14□□□□□ -0.95
SMURF1-202ENST00000361368 INE1O15225 51 aa9.11□□□□□ -0.95
SMURF1-202ENST00000361368 CRCT1Q9UGL9 99 aa9.06□□□□□ -0.96
SMURF1-202ENST00000361368 RELNP78509 3460 aa9.02□□□□□ -0.97
SMURF1-202ENST00000361368 SVEP1Q4LDE5 3571 aa9.02□□□□□ -0.97
SMURF1-202ENST00000361368 BSNQ9UPA5 3926 aa8.98□□□□□ -0.97
SMURF1-202ENST00000361368 KRTAP3-2Q9BYR7 98 aa8.93□□□□□ -0.98
SMURF1-202ENST00000361368 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.99
SMURF1-202ENST00000361368 KRTAP12-3P60328 96 aa8.89□□□□□ -0.99
SMURF1-202ENST00000361368 FBN3Q75N90 2809 aa8.89□□□□□ -0.99
SMURF1-202ENST00000361368 KRTAP23-1A1A580 65 aa8.85□□□□□ -0.99
SMURF1-202ENST00000361368 KRTAP10-4P60372 401 aaPredicted RBP8.78□□□□□ -1
SMURF1-202ENST00000361368 KRTAP4-5Q9BYR2 181 aa8.78□□□□□ -1
SMURF1-202ENST00000361368 ZFHX3Q15911 3703 aa8.76□□□□□ -1.01
SMURF1-202ENST00000361368 SRRM2Q9UQ35 2752 aaKnown RBP8.74□□□□□ -1.01
SMURF1-202ENST00000361368 LCE3AQ5TA76 89 aa8.67□□□□□ -1.02
SMURF1-202ENST00000361368 VPS13CQ709C8 3753 aa8.63□□□□□ -1.03
SMURF1-202ENST00000361368 MEGF8Q7Z7M0 2845 aa8.6□□□□□ -1.03
SMURF1-202ENST00000361368 KRTAP8-1Q8IUC2 63 aa8.59□□□□□ -1.04
SMURF1-202ENST00000361368 CUBNO60494 3623 aa8.57□□□□□ -1.04
SMURF1-202ENST00000361368 OTOGQ6ZRI0 2925 aa8.55□□□□□ -1.04
SMURF1-202ENST00000361368 FBN1P35555 2871 aaKnown RBP8.49□□□□□ -1.05
SMURF1-202ENST00000361368 ANK3Q12955 4377 aaKnown RBP8.45□□□□□ -1.06
SMURF1-202ENST00000361368 CSMD2Q7Z408 3487 aa8.44□□□□□ -1.06
SMURF1-202ENST00000361368 KRTAP10-5P60370 271 aa8.41□□□□□ -1.06
SMURF1-202ENST00000361368 COL7A1Q02388 2944 aa8.41□□□□□ -1.06
SMURF1-202ENST00000361368 NBPF19A0A087WUL8 3843 aa8.39□□□□□ -1.07
SMURF1-202ENST00000361368 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 214.6 ms