RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 COL12A1Q99715 3063 aa6.75□□□□□ -1.33
CCDC144A-204ENST00000360524 BOD1L1Q8NFC6 3051 aa6.74□□□□□ -1.33
CCDC144A-204ENST00000360524 FRYLO94915 3013 aa6.74□□□□□ -1.33
CCDC144A-204ENST00000360524 NBEAQ8NFP9 2946 aa6.73□□□□□ -1.33
CCDC144A-204ENST00000360524 DMXL2Q8TDJ6 3036 aa6.73□□□□□ -1.33
CCDC144A-204ENST00000360524 LRBAP50851 2863 aa6.73□□□□□ -1.33
CCDC144A-204ENST00000360524 ADGRG4Q8IZF6 3080 aa6.73□□□□□ -1.33
CCDC144A-204ENST00000360524 COL6A3P12111 3177 aa6.73□□□□□ -1.33
CCDC144A-204ENST00000360524 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
CCDC144A-204ENST00000360524 UTP20O75691 2785 aaKnown RBP6.7□□□□□ -1.34
CCDC144A-204ENST00000360524 ASH1LQ9NR48 2969 aaKnown RBP6.66□□□□□ -1.34
CCDC144A-204ENST00000360524 REV3LO60673 3130 aa6.64□□□□□ -1.35
CCDC144A-204ENST00000360524 APCP25054 2843 aa6.63□□□□□ -1.35
CCDC144A-204ENST00000360524 HIVEP1P15822 2718 aa6.62□□□□□ -1.35
CCDC144A-204ENST00000360524 CFAP47Q6ZTR5 3102 aa6.61□□□□□ -1.35
CCDC144A-204ENST00000360524 KMT2BQ9UMN6 2715 aaPredicted RBP6.6□□□□□ -1.35
CCDC144A-204ENST00000360524 TNP1P09430 55 aa6.59□□□□□ -1.35
CCDC144A-204ENST00000360524 H0YAA0 97 aa6.58□□□□□ -1.36
CCDC144A-204ENST00000360524 ZZEF1O43149 2961 aa6.56□□□□□ -1.36
CCDC144A-204ENST00000360524 P0C880 135 aa6.56□□□□□ -1.36
CCDC144A-204ENST00000360524 CRYBG3Q68DQ2 2970 aa6.55□□□□□ -1.36
CCDC144A-204ENST00000360524 EYSQ5T1H1 3165 aa6.55□□□□□ -1.36
CCDC144A-204ENST00000360524 CELSR2Q9HCU4 2923 aa6.53□□□□□ -1.36
CCDC144A-204ENST00000360524 KRTAP1-4P0C5Y4 121 aa6.52□□□□□ -1.37
CCDC144A-204ENST00000360524 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
CCDC144A-204ENST00000360524 A0A1B0GVY2 172 aa6.51□□□□□ -1.37
CCDC144A-204ENST00000360524 NIPBLQ6KC79 2804 aaeCLIP6.51□□□□□ -1.37
CCDC144A-204ENST00000360524 SPTBN5Q9NRC6 3674 aaKnown RBP6.5□□□□□ -1.37
CCDC144A-204ENST00000360524 XP32Q5T750 250 aa6.5□□□□□ -1.37
CCDC144A-204ENST00000360524 SPEGQ15772 3267 aa6.49□□□□□ -1.37
CCDC144A-204ENST00000360524 TENM4Q6N022 2769 aa6.48□□□□□ -1.37
CCDC144A-204ENST00000360524 USP34Q70CQ2 3546 aa6.47□□□□□ -1.37
CCDC144A-204ENST00000360524 ZANQ9Y493 2812 aa6.45□□□□□ -1.38
CCDC144A-204ENST00000360524 DCHS2Q6V1P9 2916 aa6.44□□□□□ -1.38
CCDC144A-204ENST00000360524 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
CCDC144A-204ENST00000360524 TNRC18O15417 2968 aaPredicted RBP6.42□□□□□ -1.38
CCDC144A-204ENST00000360524 DMXL1Q9Y485 3027 aa6.42□□□□□ -1.38
CCDC144A-204ENST00000360524 TPRXLQ17RH7 258 aa6.38□□□□□ -1.39
CCDC144A-204ENST00000360524 HRNRQ86YZ3 2850 aaPredicted RBP6.38□□□□□ -1.39
CCDC144A-204ENST00000360524 LOC400499M0QZD8 3231 aa6.34□□□□□ -1.39
CCDC144A-204ENST00000360524 FBN2P35556 2912 aa6.31□□□□□ -1.4
CCDC144A-204ENST00000360524 KRTAP13-3Q3SY46 172 aa6.27□□□□□ -1.41
CCDC144A-204ENST00000360524 NF1P21359 2839 aa6.25□□□□□ -1.41
CCDC144A-204ENST00000360524 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
CCDC144A-204ENST00000360524 MYO15AQ9UKN7 3530 aa6.25□□□□□ -1.41
CCDC144A-204ENST00000360524 TENM1Q9UKZ4 2725 aa6.18□□□□□ -1.42
CCDC144A-204ENST00000360524 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
CCDC144A-204ENST00000360524 CELSR1Q9NYQ6 3014 aa6.15□□□□□ -1.42
CCDC144A-204ENST00000360524 TENM3Q9P273 2699 aa6.15□□□□□ -1.42
CCDC144A-204ENST00000360524 TENM2Q9NT68 2774 aa6.12□□□□□ -1.43
CCDC144A-204ENST00000360524 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
CCDC144A-204ENST00000360524 RELNP78509 3460 aa6.11□□□□□ -1.43
CCDC144A-204ENST00000360524 WDFY3Q8IZQ1 3526 aa6.1□□□□□ -1.43
CCDC144A-204ENST00000360524 MXRA5Q9NR99 2828 aa6.08□□□□□ -1.44
CCDC144A-204ENST00000360524 DCHS1Q96JQ0 3298 aa6.03□□□□□ -1.44
CCDC144A-204ENST00000360524 TGP01266 2768 aa6.03□□□□□ -1.44
CCDC144A-204ENST00000360524 ASPMQ8IZT6 3477 aa6.01□□□□□ -1.45
CCDC144A-204ENST00000360524 PKD1L1Q8TDX9 2849 aa5.99□□□□□ -1.45
CCDC144A-204ENST00000360524 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
CCDC144A-204ENST00000360524 ZFHX4Q86UP3 3567 aa5.97□□□□□ -1.45
CCDC144A-204ENST00000360524 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
CCDC144A-204ENST00000360524 LAMA5O15230 3695 aa5.92□□□□□ -1.46
CCDC144A-204ENST00000360524 VWFP04275 2813 aa5.91□□□□□ -1.46
CCDC144A-204ENST00000360524 PDZD2O15018 2839 aa5.88□□□□□ -1.47
CCDC144A-204ENST00000360524 NBPF19A0A087WUL8 3843 aa5.87□□□□□ -1.47
CCDC144A-204ENST00000360524 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
CCDC144A-204ENST00000360524 CSMD1Q96PZ7 3565 aa5.86□□□□□ -1.47
CCDC144A-204ENST00000360524 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
CCDC144A-204ENST00000360524 FBN1P35555 2871 aaKnown RBP5.79□□□□□ -1.48
CCDC144A-204ENST00000360524 DMDP11532 3685 aa5.76□□□□□ -1.49
CCDC144A-204ENST00000360524 INE1O15225 51 aa5.75□□□□□ -1.49
CCDC144A-204ENST00000360524 SMG1Q96Q15 3661 aaKnown RBP5.74□□□□□ -1.49
CCDC144A-204ENST00000360524 OTOGQ6ZRI0 2925 aa5.73□□□□□ -1.49
CCDC144A-204ENST00000360524 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
CCDC144A-204ENST00000360524 ZFHX3Q15911 3703 aa5.7□□□□□ -1.5
CCDC144A-204ENST00000360524 MUC3AQ02505 3323 aa5.66□□□□□ -1.5
CCDC144A-204ENST00000360524 ANK3Q12955 4377 aaKnown RBP5.65□□□□□ -1.5
CCDC144A-204ENST00000360524 SVEP1Q4LDE5 3571 aa5.64□□□□□ -1.51
CCDC144A-204ENST00000360524 FBN3Q75N90 2809 aa5.61□□□□□ -1.51
CCDC144A-204ENST00000360524 SRRM2Q9UQ35 2752 aaKnown RBP5.61□□□□□ -1.51
CCDC144A-204ENST00000360524 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
CCDC144A-204ENST00000360524 CSMD2Q7Z408 3487 aa5.59□□□□□ -1.51
CCDC144A-204ENST00000360524 CUBNO60494 3623 aa5.56□□□□□ -1.52
CCDC144A-204ENST00000360524 MEGF8Q7Z7M0 2845 aa5.53□□□□□ -1.52
CCDC144A-204ENST00000360524 CRCT1Q9UGL9 99 aa5.52□□□□□ -1.53
CCDC144A-204ENST00000360524 TRRAPQ9Y4A5 3859 aa5.5□□□□□ -1.53
CCDC144A-204ENST00000360524 SPENQ96T58 3664 aaKnown RBP5.5□□□□□ -1.53
CCDC144A-204ENST00000360524 KRTAP3-2Q9BYR7 98 aa5.49□□□□□ -1.53
CCDC144A-204ENST00000360524 KRTAP3-3Q9BYR6 98 aa5.47□□□□□ -1.53
CCDC144A-204ENST00000360524 COL7A1Q02388 2944 aa5.47□□□□□ -1.53
CCDC144A-204ENST00000360524 KRTAP10-4P60372 401 aaPredicted RBP5.44□□□□□ -1.54
CCDC144A-204ENST00000360524 KRTAP4-5Q9BYR2 181 aa5.42□□□□□ -1.54
CCDC144A-204ENST00000360524 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
CCDC144A-204ENST00000360524 HUWE1Q7Z6Z7 4374 aaKnown RBP5.38□□□□□ -1.55
CCDC144A-204ENST00000360524 BSNQ9UPA5 3926 aa5.35□□□□□ -1.55
CCDC144A-204ENST00000360524 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
CCDC144A-204ENST00000360524 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
CCDC144A-204ENST00000360524 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
CCDC144A-204ENST00000360524 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
CCDC144A-204ENST00000360524 VPS13CQ709C8 3753 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms