RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 MXRA5Q9NR99 2828 aa3.02□□□□□ -1.93
PTPRD-202ENST00000356435 FRYLO94915 3013 aa3.02□□□□□ -1.93
PTPRD-202ENST00000356435 KRTAP10-8P60410 259 aa3.02□□□□□ -1.93
PTPRD-202ENST00000356435 FREM2Q5SZK8 3169 aa3.02□□□□□ -1.93
PTPRD-202ENST00000356435 LAMA1P25391 3075 aa3.01□□□□□ -1.93
PTPRD-202ENST00000356435 WDFY4Q6ZS81 3184 aa3□□□□□ -1.93
PTPRD-202ENST00000356435 KALRNO60229 2985 aa3□□□□□ -1.93
PTPRD-202ENST00000356435 XP32Q5T750 250 aa3□□□□□ -1.93
PTPRD-202ENST00000356435 ZFHX3Q15911 3703 aa2.99□□□□□ -1.93
PTPRD-202ENST00000356435 ATMQ13315 3056 aa2.99□□□□□ -1.93
PTPRD-202ENST00000356435 VCANP13611 3396 aa2.99□□□□□ -1.93
PTPRD-202ENST00000356435 TPRXLQ17RH7 258 aa2.98□□□□□ -1.93
PTPRD-202ENST00000356435 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
PTPRD-202ENST00000356435 A0A1B0GVY2 172 aa2.97□□□□□ -1.93
PTPRD-202ENST00000356435 APCP25054 2843 aa2.97□□□□□ -1.93
PTPRD-202ENST00000356435 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
PTPRD-202ENST00000356435 HIVEP1P15822 2718 aa2.96□□□□□ -1.93
PTPRD-202ENST00000356435 LRBAP50851 2863 aa2.96□□□□□ -1.94
PTPRD-202ENST00000356435 CDH23Q9H251 3354 aa2.96□□□□□ -1.94
PTPRD-202ENST00000356435 REV3LO60673 3130 aa2.96□□□□□ -1.94
PTPRD-202ENST00000356435 NF1P21359 2839 aa2.94□□□□□ -1.94
PTPRD-202ENST00000356435 ITPR2Q14571 2701 aa2.93□□□□□ -1.94
PTPRD-202ENST00000356435 XIRP2A4UGR9 3374 aa2.93□□□□□ -1.94
PTPRD-202ENST00000356435 BOD1L1Q8NFC6 3051 aa2.93□□□□□ -1.94
PTPRD-202ENST00000356435 SZT2Q5T011 3432 aa2.93□□□□□ -1.94
PTPRD-202ENST00000356435 P0C880 135 aa2.92□□□□□ -1.94
PTPRD-202ENST00000356435 DMXL2Q8TDJ6 3036 aa2.92□□□□□ -1.94
PTPRD-202ENST00000356435 KRTAP1-4P0C5Y4 121 aa2.91□□□□□ -1.94
PTPRD-202ENST00000356435 TENM3Q9P273 2699 aa2.91□□□□□ -1.94
PTPRD-202ENST00000356435 PRUNE2Q8WUY3 3088 aa2.9□□□□□ -1.94
PTPRD-202ENST00000356435 SPTBN5Q9NRC6 3674 aaKnown RBP2.9□□□□□ -1.94
PTPRD-202ENST00000356435 DNAH14Q0VDD8 3507 aa2.9□□□□□ -1.95
PTPRD-202ENST00000356435 TENM4Q6N022 2769 aa2.9□□□□□ -1.95
PTPRD-202ENST00000356435 DCHS2Q6V1P9 2916 aa2.89□□□□□ -1.95
PTPRD-202ENST00000356435 COL12A1Q99715 3063 aa2.86□□□□□ -1.95
PTPRD-202ENST00000356435 FBN2P35556 2912 aa2.86□□□□□ -1.95
PTPRD-202ENST00000356435 TENM1Q9UKZ4 2725 aa2.85□□□□□ -1.95
PTPRD-202ENST00000356435 H0YAA0 97 aa2.84□□□□□ -1.95
PTPRD-202ENST00000356435 VWFP04275 2813 aa2.84□□□□□ -1.95
PTPRD-202ENST00000356435 USP34Q70CQ2 3546 aa2.83□□□□□ -1.96
PTPRD-202ENST00000356435 EYSQ5T1H1 3165 aa2.82□□□□□ -1.96
PTPRD-202ENST00000356435 DMXL1Q9Y485 3027 aa2.81□□□□□ -1.96
PTPRD-202ENST00000356435 ASH1LQ9NR48 2969 aaKnown RBP2.8□□□□□ -1.96
PTPRD-202ENST00000356435 CELSR2Q9HCU4 2923 aa2.79□□□□□ -1.96
PTPRD-202ENST00000356435 COL6A3P12111 3177 aa2.78□□□□□ -1.96
PTPRD-202ENST00000356435 PDZD2O15018 2839 aa2.77□□□□□ -1.97
PTPRD-202ENST00000356435 CELSR1Q9NYQ6 3014 aa2.77□□□□□ -1.97
PTPRD-202ENST00000356435 LOC400499M0QZD8 3231 aa2.76□□□□□ -1.97
PTPRD-202ENST00000356435 CELSR3Q9NYQ7 3312 aa2.74□□□□□ -1.97
PTPRD-202ENST00000356435 SPEGQ15772 3267 aa2.74□□□□□ -1.97
PTPRD-202ENST00000356435 CFAP47Q6ZTR5 3102 aa2.73□□□□□ -1.97
PTPRD-202ENST00000356435 KRTAP13-4Q3LI77 160 aa2.73□□□□□ -1.97
PTPRD-202ENST00000356435 KRTAP12-2P59991 146 aa2.72□□□□□ -1.97
PTPRD-202ENST00000356435 TENM2Q9NT68 2774 aa2.71□□□□□ -1.98
PTPRD-202ENST00000356435 TGP01266 2768 aa2.71□□□□□ -1.98
PTPRD-202ENST00000356435 SRRM2Q9UQ35 2752 aaKnown RBP2.7□□□□□ -1.98
PTPRD-202ENST00000356435 KRTAP3-1Q9BYR8 98 aa2.7□□□□□ -1.98
PTPRD-202ENST00000356435 KRTAP15-1Q3LI76 137 aa2.68□□□□□ -1.98
PTPRD-202ENST00000356435 OTOGQ6ZRI0 2925 aa2.67□□□□□ -1.98
PTPRD-202ENST00000356435 MYO15AQ9UKN7 3530 aa2.67□□□□□ -1.98
PTPRD-202ENST00000356435 SMG1Q96Q15 3661 aaKnown RBP2.66□□□□□ -1.98
PTPRD-202ENST00000356435 INE1O15225 51 aa2.66□□□□□ -1.98
PTPRD-202ENST00000356435 KRTAP10-6P60371 365 aaPredicted RBP2.65□□□□□ -1.98
PTPRD-202ENST00000356435 PKD1L1Q8TDX9 2849 aa2.65□□□□□ -1.99
PTPRD-202ENST00000356435 KRTAP23-1A1A580 65 aa2.65□□□□□ -1.99
PTPRD-202ENST00000356435 CRYBG3Q68DQ2 2970 aa2.64□□□□□ -1.99
PTPRD-202ENST00000356435 WDFY3Q8IZQ1 3526 aa2.64□□□□□ -1.99
PTPRD-202ENST00000356435 MEGF8Q7Z7M0 2845 aa2.64□□□□□ -1.99
PTPRD-202ENST00000356435 ZFHX4Q86UP3 3567 aa2.63□□□□□ -1.99
PTPRD-202ENST00000356435 DCHS1Q96JQ0 3298 aa2.62□□□□□ -1.99
PTPRD-202ENST00000356435 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
PTPRD-202ENST00000356435 KRTAP3-2Q9BYR7 98 aa2.6□□□□□ -1.99
PTPRD-202ENST00000356435 DMDP11532 3685 aa2.59□□□□□ -2
PTPRD-202ENST00000356435 ANK3Q12955 4377 aaKnown RBP2.58□□□□□ -2
PTPRD-202ENST00000356435 SVEP1Q4LDE5 3571 aa2.57□□□□□ -2
PTPRD-202ENST00000356435 RELNP78509 3460 aa2.57□□□□□ -2
PTPRD-202ENST00000356435 ALMS1Q8TCU4 4167 aa2.56□□□□□ -2
PTPRD-202ENST00000356435 KRTAP10-12P60413 245 aa2.56□□□□□ -2
PTPRD-202ENST00000356435 KRTAP3-3Q9BYR6 98 aa2.56□□□□□ -2
PTPRD-202ENST00000356435 FBN1P35555 2871 aaKnown RBP2.55□□□□□ -2
PTPRD-202ENST00000356435 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
PTPRD-202ENST00000356435 LAMA5O15230 3695 aa2.54□□□□□ -2
PTPRD-202ENST00000356435 FBN3Q75N90 2809 aa2.54□□□□□ -2
PTPRD-202ENST00000356435 SPENQ96T58 3664 aaKnown RBP2.53□□□□□ -2.01
PTPRD-202ENST00000356435 CSMD1Q96PZ7 3565 aa2.52□□□□□ -2.01
PTPRD-202ENST00000356435 BSNQ9UPA5 3926 aa2.52□□□□□ -2.01
PTPRD-202ENST00000356435 KRTAP19-4Q3LI73 84 aa2.49□□□□□ -2.01
PTPRD-202ENST00000356435 CUBNO60494 3623 aa2.48□□□□□ -2.01
PTPRD-202ENST00000356435 KRTAP10-4P60372 401 aaPredicted RBP2.48□□□□□ -2.01
PTPRD-202ENST00000356435 MUC3AQ02505 3323 aa2.47□□□□□ -2.01
PTPRD-202ENST00000356435 ASPMQ8IZT6 3477 aa2.47□□□□□ -2.01
PTPRD-202ENST00000356435 AKAP9Q99996 3911 aa2.47□□□□□ -2.01
PTPRD-202ENST00000356435 MT1HL1P0DM35 61 aa2.46□□□□□ -2.02
PTPRD-202ENST00000356435 DNAH11Q96DT5 4516 aa2.45□□□□□ -2.02
PTPRD-202ENST00000356435 PLECQ15149 4684 aaKnown RBP2.45□□□□□ -2.02
PTPRD-202ENST00000356435 DNAH17Q9UFH2 4485 aa2.45□□□□□ -2.02
PTPRD-202ENST00000356435 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
PTPRD-202ENST00000356435 DNAH10Q8IVF4 4471 aa2.42□□□□□ -2.02
PTPRD-202ENST00000356435 DNAH1Q9P2D7 4330 aa2.42□□□□□ -2.02
PTPRD-202ENST00000356435 KRTAP8-1Q8IUC2 63 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms