RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 LIMD2Q9BT23 127 aa13.68□□□□□ -0.22
CHKA-202ENST00000356135 ANAPC13Q9BS18 74 aa13.68□□□□□ -0.22
CHKA-202ENST00000356135 Q5XG85 94 aa13.67□□□□□ -0.22
CHKA-202ENST00000356135 ATOX1O00244 68 aa13.66□□□□□ -0.22
CHKA-202ENST00000356135 RETNLBQ9BQ08 111 aa13.65□□□□□ -0.22
CHKA-202ENST00000356135 ASB16-AS1Q495Z4 193 aa13.64□□□□□ -0.23
CHKA-202ENST00000356135 A8MWP4 228 aa13.63□□□□□ -0.23
CHKA-202ENST00000356135 C1orf195Q5TG92 126 aa13.61□□□□□ -0.23
CHKA-202ENST00000356135 PRR15Q8IV56 129 aa13.58□□□□□ -0.23
CHKA-202ENST00000356135 NDUFB1O75438 58 aa13.53□□□□□ -0.24
CHKA-202ENST00000356135 HCG22E2RYF7 251 aa13.53□□□□□ -0.24
CHKA-202ENST00000356135 SMIM20Q8N5G0 67 aa13.48□□□□□ -0.25
CHKA-202ENST00000356135 SERP2Q8N6R1 65 aa13.48□□□□□ -0.25
CHKA-202ENST00000356135 A0A1B0GVX0 72 aa13.47□□□□□ -0.25
CHKA-202ENST00000356135 COX7CP15954 63 aa13.44□□□□□ -0.26
CHKA-202ENST00000356135 HERC1Q15751 4861 aa13.44□□□□□ -0.26
CHKA-202ENST00000356135 MMP24-AS1A0A0U1RRL7 71 aa13.43□□□□□ -0.26
CHKA-202ENST00000356135 TRAV7A0A075B6U4 112 aa13.43□□□□□ -0.26
CHKA-202ENST00000356135 PRR4Q16378 134 aa13.42□□□□□ -0.26
CHKA-202ENST00000356135 WFDC13Q8IUB5 93 aa13.42□□□□□ -0.26
CHKA-202ENST00000356135 UQCRQO14949 82 aa13.4□□□□□ -0.26
CHKA-202ENST00000356135 CASC2Q6XLA1 102 aa13.4□□□□□ -0.26
CHKA-202ENST00000356135 IGHV6-1A0A0B4J1U7 121 aa13.4□□□□□ -0.26
CHKA-202ENST00000356135 OCR1Q9BZK8 76 aa13.4□□□□□ -0.26
CHKA-202ENST00000356135 C8orf17Q9NRJ1 99 aa13.39□□□□□ -0.27
CHKA-202ENST00000356135 CCDC179H3BU77 68 aa13.38□□□□□ -0.27
CHKA-202ENST00000356135 IGLV7-46A0A075B6I9 117 aa13.36□□□□□ -0.27
CHKA-202ENST00000356135 FP248Q71RG6 208 aaPredicted RBP13.35□□□□□ -0.27
CHKA-202ENST00000356135 hDV103S1A0JD37 113 aa13.35□□□□□ -0.27
CHKA-202ENST00000356135 NOTCH2NLQ7Z3S9 236 aa13.31□□□□□ -0.28
CHKA-202ENST00000356135 C8orf87E5RJ46 101 aa13.3□□□□□ -0.28
CHKA-202ENST00000356135 C9orf92A6NGG3 77 aa13.29□□□□□ -0.28
CHKA-202ENST00000356135 TMEM254Q8TBM7 123 aa13.27□□□□□ -0.29
CHKA-202ENST00000356135 LPAP08519 4548 aa13.24□□□□□ -0.29
CHKA-202ENST00000356135 MRPL34Q9BQ48 92 aaKnown RBP13.23□□□□□ -0.29
CHKA-202ENST00000356135 LINC00313P59037 77 aa13.21□□□□□ -0.29
CHKA-202ENST00000356135 KRTAP13-3Q3SY46 172 aa13.21□□□□□ -0.29
CHKA-202ENST00000356135 C20orf197Q8N268 126 aa13.19□□□□□ -0.3
CHKA-202ENST00000356135 HMCN2Q8NDA2 5059 aa13.17□□□□□ -0.3
CHKA-202ENST00000356135 TP53AIP1Q9HCN2 124 aa13.15□□□□□ -0.3
CHKA-202ENST00000356135 KLKP1Q107X0 134 aa13.15□□□□□ -0.31
CHKA-202ENST00000356135 TPRXLQ17RH7 258 aa13.15□□□□□ -0.31
CHKA-202ENST00000356135 C5orf47Q569G3 176 aa13.15□□□□□ -0.31
CHKA-202ENST00000356135 KRTAP16-1A8MUX0 517 aa13.12□□□□□ -0.31
CHKA-202ENST00000356135 CYSTM1Q9H1C7 97 aa13.11□□□□□ -0.31
CHKA-202ENST00000356135 A0A0U1RQV1 116 aa13.09□□□□□ -0.31
CHKA-202ENST00000356135 NDUFS5O43920 106 aa13.09□□□□□ -0.31
CHKA-202ENST00000356135 Q8N9P0 234 aaPredicted RBP13.07□□□□□ -0.32
CHKA-202ENST00000356135 SNURFQ9Y675 71 aa13.07□□□□□ -0.32
CHKA-202ENST00000356135 XP32Q5T750 250 aa13.07□□□□□ -0.32
CHKA-202ENST00000356135 TRAV22A0A0B4J277 110 aa13.04□□□□□ -0.32
CHKA-202ENST00000356135 MP68P56378 58 aa13.04□□□□□ -0.32
CHKA-202ENST00000356135 H0Y9P7 68 aa13.03□□□□□ -0.32
CHKA-202ENST00000356135 LRP2P98164 4655 aa13.03□□□□□ -0.32
CHKA-202ENST00000356135 H3BPC8 53 aa13.01□□□□□ -0.33
CHKA-202ENST00000356135 ZCCHC13Q8WW36 166 aaKnown RBP13.01□□□□□ -0.33
CHKA-202ENST00000356135 NDUFC1O43677 76 aa12.97□□□□□ -0.33
CHKA-202ENST00000356135 H7BZZ5 65 aa12.97□□□□□ -0.33
CHKA-202ENST00000356135 C20orf166-AS1Q96NR2 134 aa12.96□□□□□ -0.34
CHKA-202ENST00000356135 A8MUU9 505 aa12.94□□□□□ -0.34
CHKA-202ENST00000356135 LINC00208Q96KT6 92 aa12.94□□□□□ -0.34
CHKA-202ENST00000356135 TMEM258P61165 79 aa12.92□□□□□ -0.34
CHKA-202ENST00000356135 Q5W150 140 aa12.91□□□□□ -0.34
CHKA-202ENST00000356135 Q75L30 129 aa12.9□□□□□ -0.34
CHKA-202ENST00000356135 RPL37P61927 97 aaKnown RBP12.89□□□□□ -0.35
CHKA-202ENST00000356135 C1orf64Q8NEQ6 169 aa12.89□□□□□ -0.35
CHKA-202ENST00000356135 LOC101927531A0A1B0GV80 90 aa12.79□□□□□ -0.36
CHKA-202ENST00000356135 PCOTHQ58A44 107 aa12.78□□□□□ -0.36
CHKA-202ENST00000356135 ATP11AUNQ6ZP68 121 aa12.77□□□□□ -0.36
CHKA-202ENST00000356135 FAM236DA0A1B0GTK5 79 aa12.76□□□□□ -0.37
CHKA-202ENST00000356135 FAM236CP0DP71 79 aa12.76□□□□□ -0.37
CHKA-202ENST00000356135 ATP5EP56381 51 aaPredicted RBP12.72□□□□□ -0.37
CHKA-202ENST00000356135 MUC17Q685J3 4493 aa12.72□□□□□ -0.37
CHKA-202ENST00000356135 SEC61BP60468 96 aaKnown RBP12.7□□□□□ -0.38
CHKA-202ENST00000356135 IGKV2-30P06310 120 aa12.69□□□□□ -0.38
CHKA-202ENST00000356135 CYP4F30PQ9H0H9 118 aa12.69□□□□□ -0.38
CHKA-202ENST00000356135 UBR4Q5T4S7 5183 aa12.66□□□□□ -0.38
CHKA-202ENST00000356135 SPANXA2-OT1Q8N9U9 137 aa12.66□□□□□ -0.38
CHKA-202ENST00000356135 KRTAP4-1Q9BYQ7 146 aa12.58□□□□□ -0.39
CHKA-202ENST00000356135 IGKV2D-30A0A075B6S6 120 aa12.57□□□□□ -0.4
CHKA-202ENST00000356135 C7orf65Q6ZTY9 151 aa12.55□□□□□ -0.4
CHKA-202ENST00000356135 MUC2Q02817 5179 aa12.51□□□□□ -0.41
CHKA-202ENST00000356135 SPINK7P58062 85 aa12.51□□□□□ -0.41
CHKA-202ENST00000356135 RPS28P62857 69 aaKnown RBP12.5□□□□□ -0.41
CHKA-202ENST00000356135 SERP1Q9Y6X1 66 aa12.5□□□□□ -0.41
CHKA-202ENST00000356135 RNF213Q63HN8 5207 aa12.49□□□□□ -0.41
CHKA-202ENST00000356135 HRES1P13985 223 aa12.48□□□□□ -0.41
CHKA-202ENST00000356135 DMAC1Q96GE9 116 aa12.34□□□□□ -0.43
CHKA-202ENST00000356135 COA5Q86WW8 74 aa12.25□□□□□ -0.45
CHKA-202ENST00000356135 ACYP2P14621 99 aa12.24□□□□□ -0.45
CHKA-202ENST00000356135 C4orf26Q17RF5 130 aa12.24□□□□□ -0.45
CHKA-202ENST00000356135 MPLKIPQ8TAP9 179 aa12.21□□□□□ -0.45
CHKA-202ENST00000356135 A8MUN3 132 aa12.2□□□□□ -0.46
CHKA-202ENST00000356135 SMIM26A0A096LP01 95 aa12.17□□□□□ -0.46
CHKA-202ENST00000356135 RBM12B-AS1Q9P1G2 102 aa12.14□□□□□ -0.47
CHKA-202ENST00000356135 KRTAP19-2Q3LHN2 52 aa12.13□□□□□ -0.47
CHKA-202ENST00000356135 COX6B2Q6YFQ2 88 aa12.11□□□□□ -0.47
CHKA-202ENST00000356135 KRTAP3-1Q9BYR8 98 aa12.1□□□□□ -0.47
CHKA-202ENST00000356135 CHKB-CPT1BH3BT56 60 aa12.02□□□□□ -0.48
CHKA-202ENST00000356135 LCE2CQ5TA81 110 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms