RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 COL12A1Q99715 3063 aa7.15□□□□□ -1.27
SCN8A-202ENST00000355133 APCP25054 2843 aa7.15□□□□□ -1.27
SCN8A-202ENST00000355133 FLNCQ14315 2725 aa7.13□□□□□ -1.27
SCN8A-202ENST00000355133 ASH1LQ9NR48 2969 aaKnown RBP7.12□□□□□ -1.27
SCN8A-202ENST00000355133 A0A1B0GVY2 172 aa7.11□□□□□ -1.27
SCN8A-202ENST00000355133 KMT2BQ9UMN6 2715 aaPredicted RBP7.11□□□□□ -1.27
SCN8A-202ENST00000355133 LRBAP50851 2863 aa7.11□□□□□ -1.27
SCN8A-202ENST00000355133 TENM4Q6N022 2769 aa7.1□□□□□ -1.27
SCN8A-202ENST00000355133 XP32Q5T750 250 aa7.09□□□□□ -1.27
SCN8A-202ENST00000355133 SZT2Q5T011 3432 aa7.08□□□□□ -1.28
SCN8A-202ENST00000355133 FRYLO94915 3013 aa7.08□□□□□ -1.28
SCN8A-202ENST00000355133 C10orf95Q9H7T3 257 aa7.08□□□□□ -1.28
SCN8A-202ENST00000355133 KRTAP1-4P0C5Y4 121 aa7.08□□□□□ -1.28
SCN8A-202ENST00000355133 NDUFAF8A1L188 74 aa7.07□□□□□ -1.28
SCN8A-202ENST00000355133 LAMA1P25391 3075 aa7.07□□□□□ -1.28
SCN8A-202ENST00000355133 VCANP13611 3396 aa7.06□□□□□ -1.28
SCN8A-202ENST00000355133 COL6A3P12111 3177 aa7.05□□□□□ -1.28
SCN8A-202ENST00000355133 KRTAP10-8P60410 259 aa7.04□□□□□ -1.28
SCN8A-202ENST00000355133 BOD1L1Q8NFC6 3051 aa7.04□□□□□ -1.28
SCN8A-202ENST00000355133 DNAH14Q0VDD8 3507 aa7.04□□□□□ -1.28
SCN8A-202ENST00000355133 ADGRG4Q8IZF6 3080 aa7.03□□□□□ -1.28
SCN8A-202ENST00000355133 CFAP47Q6ZTR5 3102 aa7□□□□□ -1.29
SCN8A-202ENST00000355133 NBEAQ8NFP9 2946 aa6.98□□□□□ -1.29
SCN8A-202ENST00000355133 CELSR2Q9HCU4 2923 aa6.97□□□□□ -1.29
SCN8A-202ENST00000355133 NIPBLQ6KC79 2804 aaeCLIP6.94□□□□□ -1.3
SCN8A-202ENST00000355133 EYSQ5T1H1 3165 aa6.92□□□□□ -1.3
SCN8A-202ENST00000355133 ZZEF1O43149 2961 aa6.91□□□□□ -1.3
SCN8A-202ENST00000355133 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
SCN8A-202ENST00000355133 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
SCN8A-202ENST00000355133 DCHS2Q6V1P9 2916 aa6.89□□□□□ -1.31
SCN8A-202ENST00000355133 PP632Q6XCG6 107 aa6.87□□□□□ -1.31
SCN8A-202ENST00000355133 H0YAA0 97 aa6.86□□□□□ -1.31
SCN8A-202ENST00000355133 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
SCN8A-202ENST00000355133 SPEGQ15772 3267 aa6.79□□□□□ -1.32
SCN8A-202ENST00000355133 ZANQ9Y493 2812 aa6.77□□□□□ -1.32
SCN8A-202ENST00000355133 USP34Q70CQ2 3546 aa6.77□□□□□ -1.33
SCN8A-202ENST00000355133 P0C880 135 aa6.77□□□□□ -1.33
SCN8A-202ENST00000355133 SPTBN5Q9NRC6 3674 aaKnown RBP6.76□□□□□ -1.33
SCN8A-202ENST00000355133 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
SCN8A-202ENST00000355133 TENM1Q9UKZ4 2725 aa6.73□□□□□ -1.33
SCN8A-202ENST00000355133 TENM2Q9NT68 2774 aa6.72□□□□□ -1.33
SCN8A-202ENST00000355133 TENM3Q9P273 2699 aa6.7□□□□□ -1.34
SCN8A-202ENST00000355133 NF1P21359 2839 aa6.69□□□□□ -1.34
SCN8A-202ENST00000355133 HRNRQ86YZ3 2850 aaPredicted RBP6.67□□□□□ -1.34
SCN8A-202ENST00000355133 DMXL1Q9Y485 3027 aa6.67□□□□□ -1.34
SCN8A-202ENST00000355133 TNRC18O15417 2968 aaPredicted RBP6.66□□□□□ -1.34
SCN8A-202ENST00000355133 FBN2P35556 2912 aa6.65□□□□□ -1.35
SCN8A-202ENST00000355133 CELSR1Q9NYQ6 3014 aa6.56□□□□□ -1.36
SCN8A-202ENST00000355133 TGP01266 2768 aa6.55□□□□□ -1.36
SCN8A-202ENST00000355133 LOC400499M0QZD8 3231 aa6.51□□□□□ -1.37
SCN8A-202ENST00000355133 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
SCN8A-202ENST00000355133 PKD1L1Q8TDX9 2849 aa6.5□□□□□ -1.37
SCN8A-202ENST00000355133 MYO15AQ9UKN7 3530 aa6.47□□□□□ -1.37
SCN8A-202ENST00000355133 MXRA5Q9NR99 2828 aa6.43□□□□□ -1.38
SCN8A-202ENST00000355133 VWFP04275 2813 aa6.42□□□□□ -1.38
SCN8A-202ENST00000355133 WDFY3Q8IZQ1 3526 aa6.39□□□□□ -1.39
SCN8A-202ENST00000355133 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
SCN8A-202ENST00000355133 RELNP78509 3460 aa6.35□□□□□ -1.39
SCN8A-202ENST00000355133 KRTAP12-1P59990 96 aa6.35□□□□□ -1.39
SCN8A-202ENST00000355133 PDZD2O15018 2839 aa6.34□□□□□ -1.39
SCN8A-202ENST00000355133 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
SCN8A-202ENST00000355133 DCHS1Q96JQ0 3298 aa6.31□□□□□ -1.4
SCN8A-202ENST00000355133 NBPF19A0A087WUL8 3843 aa6.27□□□□□ -1.41
SCN8A-202ENST00000355133 ASPMQ8IZT6 3477 aa6.25□□□□□ -1.41
SCN8A-202ENST00000355133 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
SCN8A-202ENST00000355133 ZFHX4Q86UP3 3567 aa6.14□□□□□ -1.43
SCN8A-202ENST00000355133 FBN1P35555 2871 aaKnown RBP6.13□□□□□ -1.43
SCN8A-202ENST00000355133 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
SCN8A-202ENST00000355133 LAMA5O15230 3695 aa6.11□□□□□ -1.43
SCN8A-202ENST00000355133 SRRM2Q9UQ35 2752 aaKnown RBP6.11□□□□□ -1.43
SCN8A-202ENST00000355133 ZFHX3Q15911 3703 aa6.08□□□□□ -1.44
SCN8A-202ENST00000355133 ANK3Q12955 4377 aaKnown RBP6.07□□□□□ -1.44
SCN8A-202ENST00000355133 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
SCN8A-202ENST00000355133 OTOGQ6ZRI0 2925 aa6.05□□□□□ -1.44
SCN8A-202ENST00000355133 CSMD1Q96PZ7 3565 aa6.05□□□□□ -1.44
SCN8A-202ENST00000355133 FBN3Q75N90 2809 aa6.01□□□□□ -1.45
SCN8A-202ENST00000355133 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
SCN8A-202ENST00000355133 KRTAP4-5Q9BYR2 181 aa5.95□□□□□ -1.46
SCN8A-202ENST00000355133 MEGF8Q7Z7M0 2845 aa5.95□□□□□ -1.46
SCN8A-202ENST00000355133 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
SCN8A-202ENST00000355133 SMG1Q96Q15 3661 aaKnown RBP5.91□□□□□ -1.46
SCN8A-202ENST00000355133 KRTAP3-3Q9BYR6 98 aa5.89□□□□□ -1.47
SCN8A-202ENST00000355133 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
SCN8A-202ENST00000355133 COL7A1Q02388 2944 aa5.87□□□□□ -1.47
SCN8A-202ENST00000355133 DMDP11532 3685 aa5.86□□□□□ -1.47
SCN8A-202ENST00000355133 CSMD2Q7Z408 3487 aa5.85□□□□□ -1.47
SCN8A-202ENST00000355133 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
SCN8A-202ENST00000355133 KRTAP10-4P60372 401 aaPredicted RBP5.83□□□□□ -1.48
SCN8A-202ENST00000355133 SVEP1Q4LDE5 3571 aa5.82□□□□□ -1.48
SCN8A-202ENST00000355133 HUWE1Q7Z6Z7 4374 aaKnown RBP5.78□□□□□ -1.48
SCN8A-202ENST00000355133 CUBNO60494 3623 aa5.74□□□□□ -1.49
SCN8A-202ENST00000355133 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
SCN8A-202ENST00000355133 SPENQ96T58 3664 aaKnown RBP5.69□□□□□ -1.5
SCN8A-202ENST00000355133 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
SCN8A-202ENST00000355133 INE1O15225 51 aa5.68□□□□□ -1.5
SCN8A-202ENST00000355133 ALMS1Q8TCU4 4167 aa5.67□□□□□ -1.5
SCN8A-202ENST00000355133 MUC3AQ02505 3323 aa5.66□□□□□ -1.5
SCN8A-202ENST00000355133 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
SCN8A-202ENST00000355133 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
SCN8A-202ENST00000355133 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms