RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 TRIOO75962 3097 aa6.45□□□□□ -1.38
RERE-201ENST00000337907 RANBP2P49792 3224 aaKnown RBP6.44□□□□□ -1.38
RERE-201ENST00000337907 CDH23Q9H251 3354 aa6.44□□□□□ -1.38
RERE-201ENST00000337907 KRTAP12-2P59991 146 aa6.41□□□□□ -1.38
RERE-201ENST00000337907 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.39
RERE-201ENST00000337907 KALRNO60229 2985 aa6.39□□□□□ -1.39
RERE-201ENST00000337907 XIRP2A4UGR9 3374 aa6.39□□□□□ -1.39
RERE-201ENST00000337907 VPS13AQ96RL7 3174 aa6.38□□□□□ -1.39
RERE-201ENST00000337907 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
RERE-201ENST00000337907 FREM2Q5SZK8 3169 aa6.38□□□□□ -1.39
RERE-201ENST00000337907 DSPP15924 2871 aaKnown RBP6.37□□□□□ -1.39
RERE-201ENST00000337907 CELSR3Q9NYQ7 3312 aa6.37□□□□□ -1.39
RERE-201ENST00000337907 PRUNE2Q8WUY3 3088 aa6.36□□□□□ -1.39
RERE-201ENST00000337907 HIVEP1P15822 2718 aa6.35□□□□□ -1.39
RERE-201ENST00000337907 UNC80Q8N2C7 3258 aa6.33□□□□□ -1.4
RERE-201ENST00000337907 LRBAP50851 2863 aa6.32□□□□□ -1.4
RERE-201ENST00000337907 TENM1Q9UKZ4 2725 aa6.32□□□□□ -1.4
RERE-201ENST00000337907 TENM3Q9P273 2699 aa6.3□□□□□ -1.4
RERE-201ENST00000337907 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
RERE-201ENST00000337907 ASH1LQ9NR48 2969 aaKnown RBP6.29□□□□□ -1.4
RERE-201ENST00000337907 LAMA1P25391 3075 aa6.29□□□□□ -1.4
RERE-201ENST00000337907 FRYLO94915 3013 aa6.28□□□□□ -1.4
RERE-201ENST00000337907 SZT2Q5T011 3432 aa6.26□□□□□ -1.41
RERE-201ENST00000337907 SPTBN5Q9NRC6 3674 aaKnown RBP6.26□□□□□ -1.41
RERE-201ENST00000337907 TGP01266 2768 aa6.24□□□□□ -1.41
RERE-201ENST00000337907 DMXL2Q8TDJ6 3036 aa6.19□□□□□ -1.42
RERE-201ENST00000337907 VCANP13611 3396 aa6.18□□□□□ -1.42
RERE-201ENST00000337907 COL12A1Q99715 3063 aa6.17□□□□□ -1.42
RERE-201ENST00000337907 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
RERE-201ENST00000337907 INE1O15225 51 aa6.15□□□□□ -1.43
RERE-201ENST00000337907 FLNCQ14315 2725 aa6.15□□□□□ -1.43
RERE-201ENST00000337907 CELSR2Q9HCU4 2923 aa6.13□□□□□ -1.43
RERE-201ENST00000337907 NF1P21359 2839 aa6.11□□□□□ -1.43
RERE-201ENST00000337907 TENM4Q6N022 2769 aa6.11□□□□□ -1.43
RERE-201ENST00000337907 USP34Q70CQ2 3546 aa6.1□□□□□ -1.43
RERE-201ENST00000337907 NIPBLQ6KC79 2804 aaeCLIP6.09□□□□□ -1.43
RERE-201ENST00000337907 TACC2O95359 2948 aa6.03□□□□□ -1.44
RERE-201ENST00000337907 COL6A3P12111 3177 aa6.02□□□□□ -1.45
RERE-201ENST00000337907 BOD1L1Q8NFC6 3051 aa6□□□□□ -1.45
RERE-201ENST00000337907 DCHS2Q6V1P9 2916 aa6□□□□□ -1.45
RERE-201ENST00000337907 CELSR1Q9NYQ6 3014 aa5.98□□□□□ -1.45
RERE-201ENST00000337907 TNRC18O15417 2968 aaPredicted RBP5.98□□□□□ -1.45
RERE-201ENST00000337907 PDZD2O15018 2839 aa5.97□□□□□ -1.45
RERE-201ENST00000337907 CFAP47Q6ZTR5 3102 aa5.97□□□□□ -1.45
RERE-201ENST00000337907 NBEAQ8NFP9 2946 aa5.97□□□□□ -1.45
RERE-201ENST00000337907 EYSQ5T1H1 3165 aa5.96□□□□□ -1.45
RERE-201ENST00000337907 ZZEF1O43149 2961 aa5.95□□□□□ -1.46
RERE-201ENST00000337907 MYO15AQ9UKN7 3530 aa5.94□□□□□ -1.46
RERE-201ENST00000337907 SPEGQ15772 3267 aa5.93□□□□□ -1.46
RERE-201ENST00000337907 ADGRG4Q8IZF6 3080 aa5.92□□□□□ -1.46
RERE-201ENST00000337907 ATMQ13315 3056 aa5.92□□□□□ -1.46
RERE-201ENST00000337907 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
RERE-201ENST00000337907 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
RERE-201ENST00000337907 DMXL1Q9Y485 3027 aa5.89□□□□□ -1.47
RERE-201ENST00000337907 TENM2Q9NT68 2774 aa5.83□□□□□ -1.48
RERE-201ENST00000337907 ZANQ9Y493 2812 aa5.83□□□□□ -1.48
RERE-201ENST00000337907 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
RERE-201ENST00000337907 NBPF19A0A087WUL8 3843 aa5.78□□□□□ -1.48
RERE-201ENST00000337907 WDFY3Q8IZQ1 3526 aa5.77□□□□□ -1.49
RERE-201ENST00000337907 VWFP04275 2813 aa5.77□□□□□ -1.49
RERE-201ENST00000337907 PKD1L1Q8TDX9 2849 aa5.74□□□□□ -1.49
RERE-201ENST00000337907 FBN2P35556 2912 aa5.73□□□□□ -1.49
RERE-201ENST00000337907 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
RERE-201ENST00000337907 LOC400499M0QZD8 3231 aa5.73□□□□□ -1.49
RERE-201ENST00000337907 ZFHX4Q86UP3 3567 aa5.7□□□□□ -1.5
RERE-201ENST00000337907 HRNRQ86YZ3 2850 aaPredicted RBP5.7□□□□□ -1.5
RERE-201ENST00000337907 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
RERE-201ENST00000337907 DMDP11532 3685 aa5.66□□□□□ -1.5
RERE-201ENST00000337907 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
RERE-201ENST00000337907 MXRA5Q9NR99 2828 aa5.65□□□□□ -1.51
RERE-201ENST00000337907 SRRM2Q9UQ35 2752 aaKnown RBP5.64□□□□□ -1.51
RERE-201ENST00000337907 ASPMQ8IZT6 3477 aa5.64□□□□□ -1.51
RERE-201ENST00000337907 DCHS1Q96JQ0 3298 aa5.6□□□□□ -1.51
RERE-201ENST00000337907 LAMA5O15230 3695 aa5.55□□□□□ -1.52
RERE-201ENST00000337907 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
RERE-201ENST00000337907 MEGF8Q7Z7M0 2845 aa5.51□□□□□ -1.53
RERE-201ENST00000337907 ZFHX3Q15911 3703 aa5.5□□□□□ -1.53
RERE-201ENST00000337907 COL7A1Q02388 2944 aa5.49□□□□□ -1.53
RERE-201ENST00000337907 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
RERE-201ENST00000337907 SMG1Q96Q15 3661 aaKnown RBP5.48□□□□□ -1.53
RERE-201ENST00000337907 RELNP78509 3460 aa5.47□□□□□ -1.53
RERE-201ENST00000337907 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
RERE-201ENST00000337907 CSMD1Q96PZ7 3565 aa5.44□□□□□ -1.54
RERE-201ENST00000337907 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
RERE-201ENST00000337907 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
RERE-201ENST00000337907 BSNQ9UPA5 3926 aa5.43□□□□□ -1.54
RERE-201ENST00000337907 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
RERE-201ENST00000337907 SPENQ96T58 3664 aaKnown RBP5.39□□□□□ -1.55
RERE-201ENST00000337907 MUC3AQ02505 3323 aa5.38□□□□□ -1.55
RERE-201ENST00000337907 FBN3Q75N90 2809 aa5.34□□□□□ -1.55
RERE-201ENST00000337907 ALMS1Q8TCU4 4167 aa5.3□□□□□ -1.56
RERE-201ENST00000337907 SVEP1Q4LDE5 3571 aa5.27□□□□□ -1.57
RERE-201ENST00000337907 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.57
RERE-201ENST00000337907 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
RERE-201ENST00000337907 ANK3Q12955 4377 aaKnown RBP5.13□□□□□ -1.59
RERE-201ENST00000337907 TRRAPQ9Y4A5 3859 aa5.13□□□□□ -1.59
RERE-201ENST00000337907 CUBNO60494 3623 aa5.11□□□□□ -1.59
RERE-201ENST00000337907 KRTAP4-5Q9BYR2 181 aa5.11□□□□□ -1.59
RERE-201ENST00000337907 VPS13CQ709C8 3753 aa5.1□□□□□ -1.59
RERE-201ENST00000337907 FBN1P35555 2871 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms