RNA–Protein interactions for RNA: ENST00000318560.5

ABL1-201, Transcript of ABL proto-oncogene 1, non-receptor tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene ABL1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABL1-201ENST00000318560 KRTAP10-10P60014 251 aa13.78□□□□□ -0.2
ABL1-201ENST00000318560 TPRXLQ17RH7 258 aa13.77□□□□□ -0.2
ABL1-201ENST00000318560 APCP25054 2843 aa13.76□□□□□ -0.21
ABL1-201ENST00000318560 CRYBG3Q68DQ2 2970 aa13.75□□□□□ -0.21
ABL1-201ENST00000318560 PP632Q6XCG6 107 aa13.73□□□□□ -0.21
ABL1-201ENST00000318560 NDUFAF8A1L188 74 aa13.71□□□□□ -0.21
ABL1-201ENST00000318560 DNAH14Q0VDD8 3507 aa13.7□□□□□ -0.22
ABL1-201ENST00000318560 PRO2289Q9P1D8 64 aa13.66□□□□□ -0.22
ABL1-201ENST00000318560 DMXL2Q8TDJ6 3036 aa13.63□□□□□ -0.23
ABL1-201ENST00000318560 XIRP2A4UGR9 3374 aa13.61□□□□□ -0.23
ABL1-201ENST00000318560 NIPBLQ6KC79 2804 aaeCLIP13.6□□□□□ -0.233e-6■■□□□ 13.3
ABL1-201ENST00000318560 SZT2Q5T011 3432 aa13.56□□□□□ -0.24
ABL1-201ENST00000318560 COL12A1Q99715 3063 aa13.49□□□□□ -0.25
ABL1-201ENST00000318560 ASH1LQ9NR48 2969 aaKnown RBP13.49□□□□□ -0.25
ABL1-201ENST00000318560 TENM3Q9P273 2699 aa13.49□□□□□ -0.25
ABL1-201ENST00000318560 ATMQ13315 3056 aa13.48□□□□□ -0.25
ABL1-201ENST00000318560 VPS13AQ96RL7 3174 aa13.45□□□□□ -0.26
ABL1-201ENST00000318560 VCANP13611 3396 aa13.44□□□□□ -0.26
ABL1-201ENST00000318560 LRBAP50851 2863 aa13.43□□□□□ -0.26
ABL1-201ENST00000318560 LAMA1P25391 3075 aa13.41□□□□□ -0.26
ABL1-201ENST00000318560 KALRNO60229 2985 aa13.41□□□□□ -0.26
ABL1-201ENST00000318560 KRTAP13-3Q3SY46 172 aa13.41□□□□□ -0.26
ABL1-201ENST00000318560 CELSR2Q9HCU4 2923 aa13.38□□□□□ -0.27
ABL1-201ENST00000318560 FREM2Q5SZK8 3169 aa13.37□□□□□ -0.27
ABL1-201ENST00000318560 SPEGQ15772 3267 aa13.36□□□□□ -0.27
ABL1-201ENST00000318560 TENM1Q9UKZ4 2725 aa13.32□□□□□ -0.28
ABL1-201ENST00000318560 FRYLO94915 3013 aa13.27□□□□□ -0.28
ABL1-201ENST00000318560 CELSR3Q9NYQ7 3312 aa13.22□□□□□ -0.29
ABL1-201ENST00000318560 DCHS2Q6V1P9 2916 aa13.22□□□□□ -0.29
ABL1-201ENST00000318560 EYSQ5T1H1 3165 aa13.22□□□□□ -0.29
ABL1-201ENST00000318560 H0YAA0 97 aa13.19□□□□□ -0.3
ABL1-201ENST00000318560 P0C880 135 aa13.17□□□□□ -0.3
ABL1-201ENST00000318560 TENM2Q9NT68 2774 aa13.16□□□□□ -0.3
ABL1-201ENST00000318560 MYO15AQ9UKN7 3530 aa13.11□□□□□ -0.31
ABL1-201ENST00000318560 SPTBN5Q9NRC6 3674 aaKnown RBP13.11□□□□□ -0.31
ABL1-201ENST00000318560 BOD1L1Q8NFC6 3051 aa13.08□□□□□ -0.32
ABL1-201ENST00000318560 ZZEF1O43149 2961 aa13.06□□□□□ -0.32
ABL1-201ENST00000318560 NF1P21359 2839 aa13.06□□□□□ -0.32
ABL1-201ENST00000318560 ADGRG4Q8IZF6 3080 aa12.98□□□□□ -0.33
ABL1-201ENST00000318560 NBEAQ8NFP9 2946 aa12.91□□□□□ -0.34
ABL1-201ENST00000318560 USP34Q70CQ2 3546 aa12.88□□□□□ -0.35
ABL1-201ENST00000318560 COL6A3P12111 3177 aa12.8□□□□□ -0.36
ABL1-201ENST00000318560 ZANQ9Y493 2812 aa12.79□□□□□ -0.36
ABL1-201ENST00000318560 CFAP47Q6ZTR5 3102 aa12.76□□□□□ -0.37
ABL1-201ENST00000318560 PKD1L1Q8TDX9 2849 aa12.73□□□□□ -0.37
ABL1-201ENST00000318560 TGP01266 2768 aa12.66□□□□□ -0.38
ABL1-201ENST00000318560 TNRC18O15417 2968 aaPredicted RBP12.64□□□□□ -0.39
ABL1-201ENST00000318560 PDZD2O15018 2839 aa12.63□□□□□ -0.39
ABL1-201ENST00000318560 KRTAP12-2P59991 146 aa12.51□□□□□ -0.41
ABL1-201ENST00000318560 KRTAP13-4Q3LI77 160 aa12.5□□□□□ -0.41
ABL1-201ENST00000318560 WDFY3Q8IZQ1 3526 aa12.48□□□□□ -0.41
ABL1-201ENST00000318560 LOC400499M0QZD8 3231 aa12.48□□□□□ -0.41
ABL1-201ENST00000318560 VWFP04275 2813 aa12.47□□□□□ -0.41
ABL1-201ENST00000318560 FBN2P35556 2912 aa12.46□□□□□ -0.42
ABL1-201ENST00000318560 CELSR1Q9NYQ6 3014 aa12.44□□□□□ -0.42
ABL1-201ENST00000318560 MXRA5Q9NR99 2828 aa12.42□□□□□ -0.42
ABL1-201ENST00000318560 KRTAP12-1P59990 96 aa12.3□□□□□ -0.44
ABL1-201ENST00000318560 HRNRQ86YZ3 2850 aaPredicted RBP12.28□□□□□ -0.44
ABL1-201ENST00000318560 DMDP11532 3685 aa12.28□□□□□ -0.44
ABL1-201ENST00000318560 DMXL1Q9Y485 3027 aa12.27□□□□□ -0.45
ABL1-201ENST00000318560 MUC3AQ02505 3323 aa12.26□□□□□ -0.45
ABL1-201ENST00000318560 KRTAP15-1Q3LI76 137 aa12.26□□□□□ -0.45
ABL1-201ENST00000318560 ASPMQ8IZT6 3477 aa12.21□□□□□ -0.46
ABL1-201ENST00000318560 SRRM2Q9UQ35 2752 aaKnown RBP12.13□□□□□ -0.47
ABL1-201ENST00000318560 ZFHX4Q86UP3 3567 aa12.09□□□□□ -0.47
ABL1-201ENST00000318560 KRTAP3-1Q9BYR8 98 aa12.09□□□□□ -0.47
ABL1-201ENST00000318560 DCHS1Q96JQ0 3298 aa12.06□□□□□ -0.48
ABL1-201ENST00000318560 LAMA5O15230 3695 aa12.02□□□□□ -0.49
ABL1-201ENST00000318560 FBN3Q75N90 2809 aa12.01□□□□□ -0.49
ABL1-201ENST00000318560 RELNP78509 3460 aa11.86□□□□□ -0.51
ABL1-201ENST00000318560 MT1HL1P0DM35 61 aa11.84□□□□□ -0.51
ABL1-201ENST00000318560 SMG1Q96Q15 3661 aaKnown RBP11.8□□□□□ -0.52
ABL1-201ENST00000318560 KRTAP10-6P60371 365 aaPredicted RBP11.77□□□□□ -0.53
ABL1-201ENST00000318560 CRCT1Q9UGL9 99 aa11.75□□□□□ -0.53
ABL1-201ENST00000318560 KRTAP10-12P60413 245 aa11.68□□□□□ -0.54
ABL1-201ENST00000318560 CSMD1Q96PZ7 3565 aa11.64□□□□□ -0.55
ABL1-201ENST00000318560 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
ABL1-201ENST00000318560 KRTAP4-5Q9BYR2 181 aa11.52□□□□□ -0.57
ABL1-201ENST00000318560 SVEP1Q4LDE5 3571 aa11.49□□□□□ -0.57
ABL1-201ENST00000318560 MEGF8Q7Z7M0 2845 aa11.44□□□□□ -0.58
ABL1-201ENST00000318560 COL7A1Q02388 2944 aa11.41□□□□□ -0.58
ABL1-201ENST00000318560 OTOGQ6ZRI0 2925 aa11.41□□□□□ -0.58
ABL1-201ENST00000318560 ZFHX3Q15911 3703 aa11.36□□□□□ -0.59
ABL1-201ENST00000318560 SPENQ96T58 3664 aaKnown RBP11.3□□□□□ -0.6
ABL1-201ENST00000318560 NBPF19A0A087WUL8 3843 aa11.3□□□□□ -0.6
ABL1-201ENST00000318560 KRTAP12-3P60328 96 aa11.29□□□□□ -0.6
ABL1-201ENST00000318560 KRTAP3-2Q9BYR7 98 aa11.27□□□□□ -0.61
ABL1-201ENST00000318560 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
ABL1-201ENST00000318560 KRTAP10-4P60372 401 aaPredicted RBP11.24□□□□□ -0.61
ABL1-201ENST00000318560 INE1O15225 51 aa11.23□□□□□ -0.61
ABL1-201ENST00000318560 CUBNO60494 3623 aa11.12□□□□□ -0.63
ABL1-201ENST00000318560 BSNQ9UPA5 3926 aa11.09□□□□□ -0.63
ABL1-201ENST00000318560 KRTAP8-1Q8IUC2 63 aa11.03□□□□□ -0.64
ABL1-201ENST00000318560 LCE3AQ5TA76 89 aa11.02□□□□□ -0.65
ABL1-201ENST00000318560 KRTAP23-1A1A580 65 aa10.94□□□□□ -0.66
ABL1-201ENST00000318560 ANK3Q12955 4377 aaKnown RBP10.88□□□□□ -0.67
ABL1-201ENST00000318560 CSMD2Q7Z408 3487 aa10.86□□□□□ -0.67
ABL1-201ENST00000318560 LORP23490 312 aaPredicted RBP10.84□□□□□ -0.67
ABL1-201ENST00000318560 KRTAP10-5P60370 271 aa10.75□□□□□ -0.69
ABL1-201ENST00000318560 VPS13CQ709C8 3753 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms