RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 SZT2Q5T011 3432 aa7.37□□□□□ -1.23
CLCN6-201ENST00000312413 APCP25054 2843 aa7.37□□□□□ -1.23
CLCN6-201ENST00000312413 H0YAA0 97 aa7.35□□□□□ -1.23
CLCN6-201ENST00000312413 P0C880 135 aa7.34□□□□□ -1.23
CLCN6-201ENST00000312413 ASH1LQ9NR48 2969 aaKnown RBP7.28□□□□□ -1.24
CLCN6-201ENST00000312413 KMT2BQ9UMN6 2715 aaPredicted RBP7.28□□□□□ -1.24
CLCN6-201ENST00000312413 UTP20O75691 2785 aaKnown RBP7.25□□□□□ -1.25
CLCN6-201ENST00000312413 COL6A3P12111 3177 aa7.25□□□□□ -1.25
CLCN6-201ENST00000312413 FRYLO94915 3013 aa7.25□□□□□ -1.25
CLCN6-201ENST00000312413 HIVEP1P15822 2718 aa7.24□□□□□ -1.25
CLCN6-201ENST00000312413 KRTAP10-8P60410 259 aa7.24□□□□□ -1.25
CLCN6-201ENST00000312413 DMXL2Q8TDJ6 3036 aa7.23□□□□□ -1.25
CLCN6-201ENST00000312413 TACC2O95359 2948 aa7.23□□□□□ -1.25
CLCN6-201ENST00000312413 BOD1L1Q8NFC6 3051 aa7.23□□□□□ -1.25
CLCN6-201ENST00000312413 SPEGQ15772 3267 aa7.22□□□□□ -1.25
CLCN6-201ENST00000312413 KRTAP1-4P0C5Y4 121 aa7.21□□□□□ -1.26
CLCN6-201ENST00000312413 XP32Q5T750 250 aa7.2□□□□□ -1.26
CLCN6-201ENST00000312413 REV3LO60673 3130 aa7.19□□□□□ -1.26
CLCN6-201ENST00000312413 LRBAP50851 2863 aa7.19□□□□□ -1.26
CLCN6-201ENST00000312413 ADGRG4Q8IZF6 3080 aa7.19□□□□□ -1.26
CLCN6-201ENST00000312413 NIPBLQ6KC79 2804 aaeCLIP7.16□□□□□ -1.26
CLCN6-201ENST00000312413 CFAP47Q6ZTR5 3102 aa7.15□□□□□ -1.27
CLCN6-201ENST00000312413 ATMQ13315 3056 aa7.14□□□□□ -1.27
CLCN6-201ENST00000312413 FLNCQ14315 2725 aa7.1□□□□□ -1.27
CLCN6-201ENST00000312413 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
CLCN6-201ENST00000312413 TENM4Q6N022 2769 aa7.08□□□□□ -1.28
CLCN6-201ENST00000312413 CELSR2Q9HCU4 2923 aa7.06□□□□□ -1.28
CLCN6-201ENST00000312413 COL12A1Q99715 3063 aa7.04□□□□□ -1.28
CLCN6-201ENST00000312413 SPTBN5Q9NRC6 3674 aaKnown RBP7.02□□□□□ -1.29
CLCN6-201ENST00000312413 TPRXLQ17RH7 258 aa7.01□□□□□ -1.29
CLCN6-201ENST00000312413 MYO15AQ9UKN7 3530 aa7□□□□□ -1.29
CLCN6-201ENST00000312413 TNRC18O15417 2968 aaPredicted RBP6.99□□□□□ -1.29
CLCN6-201ENST00000312413 TENM3Q9P273 2699 aa6.98□□□□□ -1.29
CLCN6-201ENST00000312413 ZZEF1O43149 2961 aa6.98□□□□□ -1.29
CLCN6-201ENST00000312413 USP34Q70CQ2 3546 aa6.98□□□□□ -1.29
CLCN6-201ENST00000312413 DCHS2Q6V1P9 2916 aa6.94□□□□□ -1.3
CLCN6-201ENST00000312413 KRTAP13-3Q3SY46 172 aa6.94□□□□□ -1.3
CLCN6-201ENST00000312413 KRTAP10-10P60014 251 aa6.93□□□□□ -1.3
CLCN6-201ENST00000312413 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
CLCN6-201ENST00000312413 EYSQ5T1H1 3165 aa6.92□□□□□ -1.3
CLCN6-201ENST00000312413 CRYBG3Q68DQ2 2970 aa6.91□□□□□ -1.3
CLCN6-201ENST00000312413 TGP01266 2768 aa6.89□□□□□ -1.31
CLCN6-201ENST00000312413 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
CLCN6-201ENST00000312413 LOC400499M0QZD8 3231 aa6.83□□□□□ -1.32
CLCN6-201ENST00000312413 TENM1Q9UKZ4 2725 aa6.82□□□□□ -1.32
CLCN6-201ENST00000312413 NF1P21359 2839 aa6.8□□□□□ -1.32
CLCN6-201ENST00000312413 WDFY3Q8IZQ1 3526 aa6.8□□□□□ -1.32
CLCN6-201ENST00000312413 ZANQ9Y493 2812 aa6.79□□□□□ -1.32
CLCN6-201ENST00000312413 DMXL1Q9Y485 3027 aa6.78□□□□□ -1.32
CLCN6-201ENST00000312413 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
CLCN6-201ENST00000312413 KRTAP12-1P59990 96 aa6.74□□□□□ -1.33
CLCN6-201ENST00000312413 HRNRQ86YZ3 2850 aaPredicted RBP6.71□□□□□ -1.34
CLCN6-201ENST00000312413 FBN2P35556 2912 aa6.69□□□□□ -1.34
CLCN6-201ENST00000312413 DCHS1Q96JQ0 3298 aa6.68□□□□□ -1.34
CLCN6-201ENST00000312413 ZFHX4Q86UP3 3567 aa6.65□□□□□ -1.35
CLCN6-201ENST00000312413 PDZD2O15018 2839 aa6.63□□□□□ -1.35
CLCN6-201ENST00000312413 TENM2Q9NT68 2774 aa6.62□□□□□ -1.35
CLCN6-201ENST00000312413 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
CLCN6-201ENST00000312413 RELNP78509 3460 aa6.58□□□□□ -1.36
CLCN6-201ENST00000312413 ASPMQ8IZT6 3477 aa6.57□□□□□ -1.36
CLCN6-201ENST00000312413 CSMD1Q96PZ7 3565 aa6.56□□□□□ -1.36
CLCN6-201ENST00000312413 CELSR1Q9NYQ6 3014 aa6.54□□□□□ -1.36
CLCN6-201ENST00000312413 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
CLCN6-201ENST00000312413 PKD1L1Q8TDX9 2849 aa6.48□□□□□ -1.37
CLCN6-201ENST00000312413 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
CLCN6-201ENST00000312413 LAMA5O15230 3695 aa6.45□□□□□ -1.38
CLCN6-201ENST00000312413 SMG1Q96Q15 3661 aaKnown RBP6.42□□□□□ -1.38
CLCN6-201ENST00000312413 VWFP04275 2813 aa6.41□□□□□ -1.38
CLCN6-201ENST00000312413 MXRA5Q9NR99 2828 aa6.4□□□□□ -1.38
CLCN6-201ENST00000312413 INE1O15225 51 aa6.38□□□□□ -1.39
CLCN6-201ENST00000312413 DMDP11532 3685 aa6.32□□□□□ -1.4
CLCN6-201ENST00000312413 SVEP1Q4LDE5 3571 aa6.32□□□□□ -1.4
CLCN6-201ENST00000312413 CUBNO60494 3623 aa6.27□□□□□ -1.41
CLCN6-201ENST00000312413 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
CLCN6-201ENST00000312413 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
CLCN6-201ENST00000312413 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.42
CLCN6-201ENST00000312413 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.42
CLCN6-201ENST00000312413 FBN3Q75N90 2809 aa6.14□□□□□ -1.43
CLCN6-201ENST00000312413 OTOGQ6ZRI0 2925 aa6.14□□□□□ -1.43
CLCN6-201ENST00000312413 NBPF19A0A087WUL8 3843 aa6.14□□□□□ -1.43
CLCN6-201ENST00000312413 MEGF8Q7Z7M0 2845 aa6.13□□□□□ -1.43
CLCN6-201ENST00000312413 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
CLCN6-201ENST00000312413 MUC3AQ02505 3323 aa6.09□□□□□ -1.43
CLCN6-201ENST00000312413 SPENQ96T58 3664 aaKnown RBP6.07□□□□□ -1.44
CLCN6-201ENST00000312413 FBN1P35555 2871 aaKnown RBP6.06□□□□□ -1.44
CLCN6-201ENST00000312413 COL7A1Q02388 2944 aa6□□□□□ -1.45
CLCN6-201ENST00000312413 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
CLCN6-201ENST00000312413 KRTAP12-3P60328 96 aa5.99□□□□□ -1.45
CLCN6-201ENST00000312413 CSMD2Q7Z408 3487 aa5.99□□□□□ -1.45
CLCN6-201ENST00000312413 MT1HL1P0DM35 61 aa5.99□□□□□ -1.45
CLCN6-201ENST00000312413 ZFHX3Q15911 3703 aa5.96□□□□□ -1.46
CLCN6-201ENST00000312413 BSNQ9UPA5 3926 aa5.95□□□□□ -1.46
CLCN6-201ENST00000312413 ANK3Q12955 4377 aaKnown RBP5.93□□□□□ -1.46
CLCN6-201ENST00000312413 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
CLCN6-201ENST00000312413 TRRAPQ9Y4A5 3859 aa5.84□□□□□ -1.47
CLCN6-201ENST00000312413 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
CLCN6-201ENST00000312413 ALMS1Q8TCU4 4167 aa5.78□□□□□ -1.48
CLCN6-201ENST00000312413 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
CLCN6-201ENST00000312413 VPS13CQ709C8 3753 aa5.76□□□□□ -1.49
CLCN6-201ENST00000312413 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms