RNA–Protein interactions for RNA: ENST00000265085.9

CPEB4-201, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPEB4, Length 9,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-201ENST00000265085 TNP1P09430 55 aa4.37□□□□□ -1.71
CPEB4-201ENST00000265085 PDZD2O15018 2839 aa4.37□□□□□ -1.71
CPEB4-201ENST00000265085 TNRC18O15417 2968 aaPredicted RBP4.37□□□□□ -1.71
CPEB4-201ENST00000265085 RPS29P62273 56 aaKnown RBP4.36□□□□□ -1.71
CPEB4-201ENST00000265085 KRTAP10-8P60410 259 aa4.35□□□□□ -1.71
CPEB4-201ENST00000265085 HTTP42858 3142 aa4.35□□□□□ -1.71
CPEB4-201ENST00000265085 MXRA5Q9NR99 2828 aa4.32□□□□□ -1.72
CPEB4-201ENST00000265085 Q6ZRN7 208 aaPredicted RBP4.32□□□□□ -1.72
CPEB4-201ENST00000265085 KRTAP1-5Q9BYS1 174 aa4.29□□□□□ -1.72
CPEB4-201ENST00000265085 LAMA1P25391 3075 aa4.29□□□□□ -1.72
CPEB4-201ENST00000265085 TENM1Q9UKZ4 2725 aa4.29□□□□□ -1.72
CPEB4-201ENST00000265085 KRTAP10-3P60369 221 aa4.29□□□□□ -1.72
CPEB4-201ENST00000265085 CRYBG3Q68DQ2 2970 aa4.27□□□□□ -1.73
CPEB4-201ENST00000265085 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
CPEB4-201ENST00000265085 HRNRQ86YZ3 2850 aaPredicted RBP4.25□□□□□ -1.73
CPEB4-201ENST00000265085 WDFY4Q6ZS81 3184 aa4.24□□□□□ -1.73
CPEB4-201ENST00000265085 LAMA3Q16787 3333 aa4.24□□□□□ -1.73
CPEB4-201ENST00000265085 DCHS2Q6V1P9 2916 aa4.23□□□□□ -1.73
CPEB4-201ENST00000265085 COL12A1Q99715 3063 aa4.23□□□□□ -1.73
CPEB4-201ENST00000265085 MKI67P46013 3256 aaKnown RBP4.21□□□□□ -1.74
CPEB4-201ENST00000265085 TENM3Q9P273 2699 aa4.19□□□□□ -1.74
CPEB4-201ENST00000265085 KRTAP13-2Q52LG2 175 aa4.19□□□□□ -1.74
CPEB4-201ENST00000265085 XP32Q5T750 250 aa4.19□□□□□ -1.74
CPEB4-201ENST00000265085 DMXL2Q8TDJ6 3036 aa4.19□□□□□ -1.74
CPEB4-201ENST00000265085 VWFP04275 2813 aa4.18□□□□□ -1.74
CPEB4-201ENST00000265085 FBN2P35556 2912 aa4.17□□□□□ -1.74
CPEB4-201ENST00000265085 DMXL1Q9Y485 3027 aa4.16□□□□□ -1.74
CPEB4-201ENST00000265085 XIRP2A4UGR9 3374 aa4.16□□□□□ -1.74
CPEB4-201ENST00000265085 KRTAP13-4Q3LI77 160 aa4.16□□□□□ -1.74
CPEB4-201ENST00000265085 BOD1L1Q8NFC6 3051 aa4.14□□□□□ -1.75
CPEB4-201ENST00000265085 SMR3BP02814 79 aaPredicted RBP4.14□□□□□ -1.75
CPEB4-201ENST00000265085 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
CPEB4-201ENST00000265085 ATMQ13315 3056 aa4.14□□□□□ -1.75
CPEB4-201ENST00000265085 Q5VSD8 79 aa4.14□□□□□ -1.75
CPEB4-201ENST00000265085 BRCA2P51587 3418 aa4.14□□□□□ -1.75
CPEB4-201ENST00000265085 REV3LO60673 3130 aa4.12□□□□□ -1.75
CPEB4-201ENST00000265085 DNAH14Q0VDD8 3507 aa4.11□□□□□ -1.75
CPEB4-201ENST00000265085 UNC80Q8N2C7 3258 aa4.09□□□□□ -1.76
CPEB4-201ENST00000265085 ADGRG4Q8IZF6 3080 aa4.08□□□□□ -1.76
CPEB4-201ENST00000265085 CDH23Q9H251 3354 aa4.07□□□□□ -1.76
CPEB4-201ENST00000265085 SPTBN5Q9NRC6 3674 aaKnown RBP4.06□□□□□ -1.76
CPEB4-201ENST00000265085 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
CPEB4-201ENST00000265085 KRTAP1-3Q8IUG1 177 aa4.05□□□□□ -1.76
CPEB4-201ENST00000265085 KRTAP1-1Q07627 177 aa4.04□□□□□ -1.76
CPEB4-201ENST00000265085 SZT2Q5T011 3432 aa4.02□□□□□ -1.77
CPEB4-201ENST00000265085 TENM4Q6N022 2769 aa4.02□□□□□ -1.77
CPEB4-201ENST00000265085 COL6A3P12111 3177 aa4.02□□□□□ -1.77
CPEB4-201ENST00000265085 VCANP13611 3396 aa4.02□□□□□ -1.77
CPEB4-201ENST00000265085 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
CPEB4-201ENST00000265085 PKD1L1Q8TDX9 2849 aa3.99□□□□□ -1.77
CPEB4-201ENST00000265085 ALMS1Q8TCU4 4167 aa3.99□□□□□ -1.77
CPEB4-201ENST00000265085 CELSR1Q9NYQ6 3014 aa3.99□□□□□ -1.77
CPEB4-201ENST00000265085 CFAP47Q6ZTR5 3102 aa3.98□□□□□ -1.77
CPEB4-201ENST00000265085 CELSR3Q9NYQ7 3312 aa3.98□□□□□ -1.77
CPEB4-201ENST00000265085 FBN1P35555 2871 aaKnown RBP3.97□□□□□ -1.77
CPEB4-201ENST00000265085 KRTAP10-1P60331 282 aa3.97□□□□□ -1.77
CPEB4-201ENST00000265085 M0R2T5 61 aa3.96□□□□□ -1.77
CPEB4-201ENST00000265085 ZFHX4Q86UP3 3567 aa3.96□□□□□ -1.77
CPEB4-201ENST00000265085 EYSQ5T1H1 3165 aa3.96□□□□□ -1.77
CPEB4-201ENST00000265085 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
CPEB4-201ENST00000265085 SPENQ96T58 3664 aaKnown RBP3.95□□□□□ -1.78
CPEB4-201ENST00000265085 KRTAP10-2P60368 255 aa3.95□□□□□ -1.78
CPEB4-201ENST00000265085 DMDP11532 3685 aa3.94□□□□□ -1.78
CPEB4-201ENST00000265085 COL7A1Q02388 2944 aa3.93□□□□□ -1.78
CPEB4-201ENST00000265085 KRTAP1-4P0C5Y4 121 aa3.91□□□□□ -1.78
CPEB4-201ENST00000265085 WDFY3Q8IZQ1 3526 aa3.85□□□□□ -1.79
CPEB4-201ENST00000265085 KRTAP21-3Q3LHN1 58 aa3.84□□□□□ -1.79
CPEB4-201ENST00000265085 LOC400499M0QZD8 3231 aa3.82□□□□□ -1.8
CPEB4-201ENST00000265085 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
CPEB4-201ENST00000265085 NBPF19A0A087WUL8 3843 aa3.81□□□□□ -1.8
CPEB4-201ENST00000265085 KRTAP3-2Q9BYR7 98 aa3.81□□□□□ -1.8
CPEB4-201ENST00000265085 SMG1Q96Q15 3661 aaKnown RBP3.8□□□□□ -1.8
CPEB4-201ENST00000265085 MYO15AQ9UKN7 3530 aa3.79□□□□□ -1.8
CPEB4-201ENST00000265085 MEGF8Q7Z7M0 2845 aa3.79□□□□□ -1.8
CPEB4-201ENST00000265085 SPEGQ15772 3267 aa3.78□□□□□ -1.8
CPEB4-201ENST00000265085 LAMA5O15230 3695 aa3.77□□□□□ -1.81
CPEB4-201ENST00000265085 DCHS1Q96JQ0 3298 aa3.72□□□□□ -1.81
CPEB4-201ENST00000265085 CSMD1Q96PZ7 3565 aa3.72□□□□□ -1.81
CPEB4-201ENST00000265085 AKAP9Q99996 3911 aa3.72□□□□□ -1.81
CPEB4-201ENST00000265085 ASPMQ8IZT6 3477 aa3.71□□□□□ -1.82
CPEB4-201ENST00000265085 KRTAP3-3Q9BYR6 98 aa3.69□□□□□ -1.82
CPEB4-201ENST00000265085 FBN3Q75N90 2809 aa3.68□□□□□ -1.82
CPEB4-201ENST00000265085 VPS13CQ709C8 3753 aa3.64□□□□□ -1.83
CPEB4-201ENST00000265085 RELNP78509 3460 aa3.6□□□□□ -1.83
CPEB4-201ENST00000265085 SVEP1Q4LDE5 3571 aa3.6□□□□□ -1.83
CPEB4-201ENST00000265085 TRRAPQ9Y4A5 3859 aa3.59□□□□□ -1.83
CPEB4-201ENST00000265085 BSNQ9UPA5 3926 aa3.59□□□□□ -1.84
CPEB4-201ENST00000265085 MUC3AQ02505 3323 aa3.56□□□□□ -1.84
CPEB4-201ENST00000265085 CUBNO60494 3623 aa3.53□□□□□ -1.84
CPEB4-201ENST00000265085 A0A1B0GVY2 172 aa3.47□□□□□ -1.85
CPEB4-201ENST00000265085 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
CPEB4-201ENST00000265085 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
CPEB4-201ENST00000265085 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
CPEB4-201ENST00000265085 ZNF469Q96JG9 3925 aaPredicted RBP3.4□□□□□ -1.87
CPEB4-201ENST00000265085 KRTAP10-10P60014 251 aa3.4□□□□□ -1.87
CPEB4-201ENST00000265085 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
CPEB4-201ENST00000265085 CSMD3Q7Z407 3707 aa3.39□□□□□ -1.87
CPEB4-201ENST00000265085 LYSTQ99698 3801 aa3.37□□□□□ -1.87
CPEB4-201ENST00000265085 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
CPEB4-201ENST00000265085 DNAH7Q8WXX0 4024 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms