RNA–Protein interactions for RNA: ENST00000261439.8

TBC1D1-201, Transcript of TBC1 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D1, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-201ENST00000261439 ITPR1Q14643 2758 aa8.11□□□□□ -1.11
TBC1D1-201ENST00000261439 RPS29P62273 56 aaKnown RBP8.11□□□□□ -1.11
TBC1D1-201ENST00000261439 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
TBC1D1-201ENST00000261439 USP34Q70CQ2 3546 aa8.08□□□□□ -1.12
TBC1D1-201ENST00000261439 APCP25054 2843 aa8.07□□□□□ -1.12
TBC1D1-201ENST00000261439 ATMQ13315 3056 aa8.05□□□□□ -1.12
TBC1D1-201ENST00000261439 ITPR2Q14571 2701 aa8.04□□□□□ -1.12
TBC1D1-201ENST00000261439 UTP20O75691 2785 aaKnown RBP8.01□□□□□ -1.13
TBC1D1-201ENST00000261439 HIVEP1P15822 2718 aa8.01□□□□□ -1.13
TBC1D1-201ENST00000261439 ADGRG4Q8IZF6 3080 aa8.01□□□□□ -1.13
TBC1D1-201ENST00000261439 LRBAP50851 2863 aa8.01□□□□□ -1.13
TBC1D1-201ENST00000261439 COL6A3P12111 3177 aa7.99□□□□□ -1.13
TBC1D1-201ENST00000261439 MYO15AQ9UKN7 3530 aa7.97□□□□□ -1.13
TBC1D1-201ENST00000261439 BOD1L1Q8NFC6 3051 aa7.97□□□□□ -1.13
TBC1D1-201ENST00000261439 COL12A1Q99715 3063 aa7.96□□□□□ -1.13
TBC1D1-201ENST00000261439 SPEGQ15772 3267 aa7.96□□□□□ -1.14
TBC1D1-201ENST00000261439 CFAP47Q6ZTR5 3102 aa7.93□□□□□ -1.14
TBC1D1-201ENST00000261439 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
TBC1D1-201ENST00000261439 FLNCQ14315 2725 aa7.9□□□□□ -1.15
TBC1D1-201ENST00000261439 FRYLO94915 3013 aa7.88□□□□□ -1.15
TBC1D1-201ENST00000261439 TNP1P09430 55 aa7.87□□□□□ -1.15
TBC1D1-201ENST00000261439 CELSR2Q9HCU4 2923 aa7.85□□□□□ -1.15
TBC1D1-201ENST00000261439 ZZEF1O43149 2961 aa7.83□□□□□ -1.16
TBC1D1-201ENST00000261439 KMT2BQ9UMN6 2715 aaPredicted RBP7.83□□□□□ -1.16
TBC1D1-201ENST00000261439 H0YAA0 97 aa7.81□□□□□ -1.16
TBC1D1-201ENST00000261439 CRYBG3Q68DQ2 2970 aa7.8□□□□□ -1.16
TBC1D1-201ENST00000261439 WDFY3Q8IZQ1 3526 aa7.77□□□□□ -1.17
TBC1D1-201ENST00000261439 NIPBLQ6KC79 2804 aaeCLIP7.75□□□□□ -1.17
TBC1D1-201ENST00000261439 KRTAP1-4P0C5Y4 121 aa7.73□□□□□ -1.17
TBC1D1-201ENST00000261439 DMDP11532 3685 aa7.73□□□□□ -1.17
TBC1D1-201ENST00000261439 DCHS2Q6V1P9 2916 aa7.72□□□□□ -1.17
TBC1D1-201ENST00000261439 XP32Q5T750 250 aa7.68□□□□□ -1.18
TBC1D1-201ENST00000261439 TENM4Q6N022 2769 aa7.68□□□□□ -1.18
TBC1D1-201ENST00000261439 P0C880 135 aa7.66□□□□□ -1.18
TBC1D1-201ENST00000261439 PP632Q6XCG6 107 aa7.65□□□□□ -1.18
TBC1D1-201ENST00000261439 DMXL1Q9Y485 3027 aa7.65□□□□□ -1.19
TBC1D1-201ENST00000261439 ZANQ9Y493 2812 aa7.64□□□□□ -1.19
TBC1D1-201ENST00000261439 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
TBC1D1-201ENST00000261439 A0A1B0GVY2 172 aa7.62□□□□□ -1.19
TBC1D1-201ENST00000261439 LOC400499M0QZD8 3231 aa7.58□□□□□ -1.2
TBC1D1-201ENST00000261439 FBN2P35556 2912 aa7.53□□□□□ -1.2
TBC1D1-201ENST00000261439 MUC3AQ02505 3323 aa7.51□□□□□ -1.21
TBC1D1-201ENST00000261439 HRNRQ86YZ3 2850 aaPredicted RBP7.48□□□□□ -1.21
TBC1D1-201ENST00000261439 TENM3Q9P273 2699 aa7.45□□□□□ -1.22
TBC1D1-201ENST00000261439 NF1P21359 2839 aa7.45□□□□□ -1.22
TBC1D1-201ENST00000261439 TGP01266 2768 aa7.45□□□□□ -1.22
TBC1D1-201ENST00000261439 ASPMQ8IZT6 3477 aa7.42□□□□□ -1.22
TBC1D1-201ENST00000261439 LAMA5O15230 3695 aa7.41□□□□□ -1.22
TBC1D1-201ENST00000261439 KRTAP13-3Q3SY46 172 aa7.41□□□□□ -1.22
TBC1D1-201ENST00000261439 TENM1Q9UKZ4 2725 aa7.4□□□□□ -1.22
TBC1D1-201ENST00000261439 ZFHX4Q86UP3 3567 aa7.4□□□□□ -1.22
TBC1D1-201ENST00000261439 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
TBC1D1-201ENST00000261439 KRTAP10-10P60014 251 aa7.35□□□□□ -1.23
TBC1D1-201ENST00000261439 CELSR1Q9NYQ6 3014 aa7.34□□□□□ -1.23
TBC1D1-201ENST00000261439 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
TBC1D1-201ENST00000261439 BSNQ9UPA5 3926 aa7.3□□□□□ -1.24
TBC1D1-201ENST00000261439 RELNP78509 3460 aa7.28□□□□□ -1.24
TBC1D1-201ENST00000261439 TENM2Q9NT68 2774 aa7.28□□□□□ -1.24
TBC1D1-201ENST00000261439 KRTAP21-3Q3LHN1 58 aa7.27□□□□□ -1.25
TBC1D1-201ENST00000261439 SMG1Q96Q15 3661 aaKnown RBP7.26□□□□□ -1.25
TBC1D1-201ENST00000261439 DCHS1Q96JQ0 3298 aa7.22□□□□□ -1.25
TBC1D1-201ENST00000261439 SPENQ96T58 3664 aaKnown RBP7.22□□□□□ -1.25
TBC1D1-201ENST00000261439 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
TBC1D1-201ENST00000261439 PKD1L1Q8TDX9 2849 aa7.16□□□□□ -1.26
TBC1D1-201ENST00000261439 PDZD2O15018 2839 aa7.16□□□□□ -1.26
TBC1D1-201ENST00000261439 MXRA5Q9NR99 2828 aa7.16□□□□□ -1.26
TBC1D1-201ENST00000261439 KRTAP12-1P59990 96 aa7.15□□□□□ -1.27
TBC1D1-201ENST00000261439 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
TBC1D1-201ENST00000261439 VWFP04275 2813 aa7.11□□□□□ -1.27
TBC1D1-201ENST00000261439 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
TBC1D1-201ENST00000261439 CSMD1Q96PZ7 3565 aa7.07□□□□□ -1.28
TBC1D1-201ENST00000261439 SVEP1Q4LDE5 3571 aa6.95□□□□□ -1.3
TBC1D1-201ENST00000261439 KRTAP10-6P60371 365 aaPredicted RBP6.92□□□□□ -1.3
TBC1D1-201ENST00000261439 ANK3Q12955 4377 aaKnown RBP6.88□□□□□ -1.31
TBC1D1-201ENST00000261439 NBPF19A0A087WUL8 3843 aa6.86□□□□□ -1.31
TBC1D1-201ENST00000261439 FBN1P35555 2871 aaKnown RBP6.85□□□□□ -1.31
TBC1D1-201ENST00000261439 KRTAP15-1Q3LI76 137 aa6.82□□□□□ -1.32
TBC1D1-201ENST00000261439 SRRM2Q9UQ35 2752 aaKnown RBP6.81□□□□□ -1.32
TBC1D1-201ENST00000261439 CSMD2Q7Z408 3487 aa6.8□□□□□ -1.32
TBC1D1-201ENST00000261439 VPS13CQ709C8 3753 aa6.79□□□□□ -1.32
TBC1D1-201ENST00000261439 FBN3Q75N90 2809 aa6.78□□□□□ -1.32
TBC1D1-201ENST00000261439 ZFHX3Q15911 3703 aa6.74□□□□□ -1.33
TBC1D1-201ENST00000261439 MEGF8Q7Z7M0 2845 aa6.73□□□□□ -1.33
TBC1D1-201ENST00000261439 CUBNO60494 3623 aa6.73□□□□□ -1.33
TBC1D1-201ENST00000261439 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.34
TBC1D1-201ENST00000261439 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
TBC1D1-201ENST00000261439 COL7A1Q02388 2944 aa6.6□□□□□ -1.35
TBC1D1-201ENST00000261439 AKAP9Q99996 3911 aa6.6□□□□□ -1.35
TBC1D1-201ENST00000261439 OTOGQ6ZRI0 2925 aa6.59□□□□□ -1.35
TBC1D1-201ENST00000261439 ZNF469Q96JG9 3925 aaPredicted RBP6.56□□□□□ -1.36
TBC1D1-201ENST00000261439 INE1O15225 51 aa6.52□□□□□ -1.37
TBC1D1-201ENST00000261439 MT1HL1P0DM35 61 aa6.48□□□□□ -1.37
TBC1D1-201ENST00000261439 TRRAPQ9Y4A5 3859 aa6.47□□□□□ -1.37
TBC1D1-201ENST00000261439 KRTAP10-12P60413 245 aa6.44□□□□□ -1.38
TBC1D1-201ENST00000261439 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
TBC1D1-201ENST00000261439 HUWE1Q7Z6Z7 4374 aaKnown RBP6.35□□□□□ -1.39
TBC1D1-201ENST00000261439 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
TBC1D1-201ENST00000261439 KRTAP10-4P60372 401 aaPredicted RBP6.3□□□□□ -1.4
TBC1D1-201ENST00000261439 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
TBC1D1-201ENST00000261439 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms