RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
DCLK1-201ENST00000255448 H0YAA0 97 aa6.07□□□□□ -1.44
DCLK1-201ENST00000255448 ATMQ13315 3056 aa6.07□□□□□ -1.44
DCLK1-201ENST00000255448 COL12A1Q99715 3063 aa6.06□□□□□ -1.44
DCLK1-201ENST00000255448 NIPBLQ6KC79 2804 aaeCLIP6.05□□□□□ -1.44
DCLK1-201ENST00000255448 KRTAP13-2Q52LG2 175 aa6.04□□□□□ -1.44
DCLK1-201ENST00000255448 UTP20O75691 2785 aaKnown RBP6.04□□□□□ -1.44
DCLK1-201ENST00000255448 APCP25054 2843 aa6.03□□□□□ -1.44
DCLK1-201ENST00000255448 FRYLO94915 3013 aa6.03□□□□□ -1.44
DCLK1-201ENST00000255448 REV3LO60673 3130 aa6.01□□□□□ -1.45
DCLK1-201ENST00000255448 DNAH14Q0VDD8 3507 aa6.01□□□□□ -1.45
DCLK1-201ENST00000255448 P0C880 135 aa5.99□□□□□ -1.45
DCLK1-201ENST00000255448 VCANP13611 3396 aa5.99□□□□□ -1.45
DCLK1-201ENST00000255448 ADGRG4Q8IZF6 3080 aa5.97□□□□□ -1.45
DCLK1-201ENST00000255448 CDH23Q9H251 3354 aa5.94□□□□□ -1.46
DCLK1-201ENST00000255448 LAMA1P25391 3075 aa5.94□□□□□ -1.46
DCLK1-201ENST00000255448 ZZEF1O43149 2961 aa5.89□□□□□ -1.47
DCLK1-201ENST00000255448 CFAP47Q6ZTR5 3102 aa5.88□□□□□ -1.47
DCLK1-201ENST00000255448 EYSQ5T1H1 3165 aa5.88□□□□□ -1.47
DCLK1-201ENST00000255448 KRTAP10-8P60410 259 aa5.86□□□□□ -1.47
DCLK1-201ENST00000255448 BOD1L1Q8NFC6 3051 aa5.86□□□□□ -1.47
DCLK1-201ENST00000255448 TNP1P09430 55 aa5.86□□□□□ -1.47
DCLK1-201ENST00000255448 CELSR2Q9HCU4 2923 aa5.86□□□□□ -1.47
DCLK1-201ENST00000255448 SZT2Q5T011 3432 aa5.85□□□□□ -1.47
DCLK1-201ENST00000255448 CRYBG3Q68DQ2 2970 aa5.84□□□□□ -1.47
DCLK1-201ENST00000255448 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
DCLK1-201ENST00000255448 TNRC18O15417 2968 aaPredicted RBP5.82□□□□□ -1.48
DCLK1-201ENST00000255448 COL6A3P12111 3177 aa5.81□□□□□ -1.48
DCLK1-201ENST00000255448 DCHS2Q6V1P9 2916 aa5.81□□□□□ -1.48
DCLK1-201ENST00000255448 ZANQ9Y493 2812 aa5.81□□□□□ -1.48
DCLK1-201ENST00000255448 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
DCLK1-201ENST00000255448 DMXL1Q9Y485 3027 aa5.75□□□□□ -1.49
DCLK1-201ENST00000255448 TENM3Q9P273 2699 aa5.73□□□□□ -1.49
DCLK1-201ENST00000255448 SPEGQ15772 3267 aa5.73□□□□□ -1.49
DCLK1-201ENST00000255448 XP32Q5T750 250 aa5.73□□□□□ -1.49
DCLK1-201ENST00000255448 NF1P21359 2839 aa5.71□□□□□ -1.5
DCLK1-201ENST00000255448 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
DCLK1-201ENST00000255448 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
DCLK1-201ENST00000255448 TGP01266 2768 aa5.68□□□□□ -1.5
DCLK1-201ENST00000255448 TENM1Q9UKZ4 2725 aa5.68□□□□□ -1.5
DCLK1-201ENST00000255448 HRNRQ86YZ3 2850 aaPredicted RBP5.67□□□□□ -1.5
DCLK1-201ENST00000255448 MXRA5Q9NR99 2828 aa5.62□□□□□ -1.51
DCLK1-201ENST00000255448 TENM2Q9NT68 2774 aa5.62□□□□□ -1.51
DCLK1-201ENST00000255448 FBN2P35556 2912 aa5.61□□□□□ -1.51
DCLK1-201ENST00000255448 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
DCLK1-201ENST00000255448 A0A1B0GVY2 172 aa5.57□□□□□ -1.52
DCLK1-201ENST00000255448 USP34Q70CQ2 3546 aa5.56□□□□□ -1.52
DCLK1-201ENST00000255448 PDZD2O15018 2839 aa5.49□□□□□ -1.53
DCLK1-201ENST00000255448 CELSR1Q9NYQ6 3014 aa5.48□□□□□ -1.53
DCLK1-201ENST00000255448 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
DCLK1-201ENST00000255448 LOC400499M0QZD8 3231 aa5.47□□□□□ -1.53
DCLK1-201ENST00000255448 MYO15AQ9UKN7 3530 aa5.47□□□□□ -1.53
DCLK1-201ENST00000255448 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
DCLK1-201ENST00000255448 PKD1L1Q8TDX9 2849 aa5.47□□□□□ -1.53
DCLK1-201ENST00000255448 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
DCLK1-201ENST00000255448 SPTBN5Q9NRC6 3674 aaKnown RBP5.44□□□□□ -1.54
DCLK1-201ENST00000255448 DCHS1Q96JQ0 3298 aa5.43□□□□□ -1.54
DCLK1-201ENST00000255448 PRO2289Q9P1D8 64 aa5.43□□□□□ -1.54
DCLK1-201ENST00000255448 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
DCLK1-201ENST00000255448 KRTAP13-4Q3LI77 160 aa5.39□□□□□ -1.55
DCLK1-201ENST00000255448 WDFY3Q8IZQ1 3526 aa5.33□□□□□ -1.56
DCLK1-201ENST00000255448 VWFP04275 2813 aa5.32□□□□□ -1.56
DCLK1-201ENST00000255448 SRRM2Q9UQ35 2752 aaKnown RBP5.32□□□□□ -1.56
DCLK1-201ENST00000255448 KRTAP10-6P60371 365 aaPredicted RBP5.3□□□□□ -1.56
DCLK1-201ENST00000255448 OTOGQ6ZRI0 2925 aa5.29□□□□□ -1.56
DCLK1-201ENST00000255448 CSMD1Q96PZ7 3565 aa5.28□□□□□ -1.56
DCLK1-201ENST00000255448 INE1O15225 51 aa5.22□□□□□ -1.57
DCLK1-201ENST00000255448 ZFHX4Q86UP3 3567 aa5.21□□□□□ -1.57
DCLK1-201ENST00000255448 FBN1P35555 2871 aaKnown RBP5.21□□□□□ -1.58
DCLK1-201ENST00000255448 RELNP78509 3460 aa5.18□□□□□ -1.58
DCLK1-201ENST00000255448 ASPMQ8IZT6 3477 aa5.18□□□□□ -1.58
DCLK1-201ENST00000255448 CUBNO60494 3623 aa5.1□□□□□ -1.59
DCLK1-201ENST00000255448 KRTAP3-2Q9BYR7 98 aa5.09□□□□□ -1.59
DCLK1-201ENST00000255448 FBN3Q75N90 2809 aa5.06□□□□□ -1.6
DCLK1-201ENST00000255448 NBPF19A0A087WUL8 3843 aa5.06□□□□□ -1.6
DCLK1-201ENST00000255448 ZFHX3Q15911 3703 aa5.06□□□□□ -1.6
DCLK1-201ENST00000255448 SMG1Q96Q15 3661 aaKnown RBP5.06□□□□□ -1.6
DCLK1-201ENST00000255448 MT1HL1P0DM35 61 aa5.05□□□□□ -1.6
DCLK1-201ENST00000255448 MEGF8Q7Z7M0 2845 aa5.04□□□□□ -1.6
DCLK1-201ENST00000255448 LAMA5O15230 3695 aa5.02□□□□□ -1.61
DCLK1-201ENST00000255448 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
DCLK1-201ENST00000255448 SVEP1Q4LDE5 3571 aa5□□□□□ -1.61
DCLK1-201ENST00000255448 ANK3Q12955 4377 aaKnown RBP4.99□□□□□ -1.61
DCLK1-201ENST00000255448 COL7A1Q02388 2944 aa4.95□□□□□ -1.62
DCLK1-201ENST00000255448 KRTAP10-4P60372 401 aaPredicted RBP4.92□□□□□ -1.62
DCLK1-201ENST00000255448 DMDP11532 3685 aa4.9□□□□□ -1.63
DCLK1-201ENST00000255448 KRTAP4-5Q9BYR2 181 aa4.86□□□□□ -1.63
DCLK1-201ENST00000255448 SPENQ96T58 3664 aaKnown RBP4.84□□□□□ -1.64
DCLK1-201ENST00000255448 MUC3AQ02505 3323 aa4.81□□□□□ -1.64
DCLK1-201ENST00000255448 TRRAPQ9Y4A5 3859 aa4.77□□□□□ -1.65
DCLK1-201ENST00000255448 CSMD2Q7Z408 3487 aa4.75□□□□□ -1.65
DCLK1-201ENST00000255448 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
DCLK1-201ENST00000255448 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
DCLK1-201ENST00000255448 HUWE1Q7Z6Z7 4374 aaKnown RBP4.7□□□□□ -1.66
DCLK1-201ENST00000255448 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
DCLK1-201ENST00000255448 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
DCLK1-201ENST00000255448 ALMS1Q8TCU4 4167 aa4.69□□□□□ -1.66
DCLK1-201ENST00000255448 LORP23490 312 aaPredicted RBP4.67□□□□□ -1.66
DCLK1-201ENST00000255448 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
DCLK1-201ENST00000255448 CSMD3Q7Z407 3707 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms