RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Tmem91Q8C581 172 aa9.45□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Pip4p2Q9CZX7 257 aa9.45□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Tnfrsf13bQ9ET35 249 aa9.45□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ighv5-12-4A0A0A6YWG4 117 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 P04946 108 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Srsf1Q6PDM2 248 aaKnown RBP9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Wdr31Q9JHB4 367 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ighv1-16A0A075B5U1 98 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Trav19A0A0B4J1K4 119 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Defa26Q3L180 93 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Slc25a48Q8BW66 306 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Jbts17Q8CE72 3214 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Bak1O08734 209 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ntf4Q80VU4 209 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Olfr1199Q8VF94 310 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Trav6d-7A0A075B6B0 112 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ighv1-20A0A0A6YX66 117 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Gm7849D3YX03 116 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Wipf2Q6PEV3 440 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Nhlrc1Q8BR37 401 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Rnf138Q9CQE0 245 aaKnown RBP9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Setd2E9Q5F9 2537 aa9.44□□□□□ -0.9
Ndc1-204ENSMUST00000139560 KprpB2RUR4 657 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Gm12830F6XVH0 157 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 LbhQ9CX60 105 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Flg2Q2VIS4 2362 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ighv3-8A0A075B5T0 131 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Wfdc11A2A5H7 82 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Tm4sf19E9Q9H8 206 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 P01736 120 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ypel3P61237 119 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Gm4763Q8CFJ5 196 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Tmem167aQ9CR64 72 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Gm29644A0A087WPG2 191 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 P01726 129 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Dtx1Q61010 627 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Rtn4rl2Q7M6Z0 420 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Rchy1Q9CR50 261 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 PlnP61014 52 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Runx1Q03347 451 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 9130213A22RikQ3V3T2 120 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Gm26558Q8BLW8 286 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Tex48Q9DA81 110 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Plac1Q9JI83 173 aa9.43□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Parp4E9PYK3 1969 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 H2-DMb1P35737 261 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 NpbQ8K4P1 119 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Olfr1323Q8VF35 309 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ifitm2Q99J93 144 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Tmem131O70472 1877 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Gm20517G3UVU6 152 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Lhfpl1Q80SV1 220 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Srsf7Q8BL97 267 aaKnown RBP9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Muc15Q8C6Z1 331 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ndufa11Q9D8B4 141 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Dennd4cA6H8H2 1906 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Igkv13-84A0A140T8N3 115 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 P04945 108 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Gm10803Q3TZS6 135 aa9.42□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ighv1-81A0A075B5Y4 117 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ighv8-8A0A0A6YXQ0 119 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Olfr317Q5NCD6 327 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Fbxl15Q91W61 300 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Dchs2A0A0A6YW72 3346 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Trav7d-3Q5R1I1 112 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Cd300eQ8K249 196 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Tcf20Q9EPQ8 1987 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Trdv5A0A075B661 115 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Brd3osA0A1B0GRB6 84 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 P01680 129 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 P01794 123 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Defa7P50705 93 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Defa20Q45VN2 95 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Smlr1J3QMJ4 66 aa9.41□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ighv8-4A0A0A6YW26 117 aa9.4□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Igkv6-23A0A140T8N5 115 aa9.4□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Timm21Q8CCM6 249 aa9.4□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ovol2Q8CIV7 274 aa9.4□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Pgpep1lQ9CWB5 130 aa9.4□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Tomm40Q9QYA2 361 aa9.4□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ankhd1E9PUR0 2548 aaKnown RBP9.4□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Ighv1-31A0A0A6YWK5 117 aa9.4□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Mrpl53Q9D1H8 118 aaKnown RBP9.4□□□□□ -0.9
Ndc1-204ENSMUST00000139560 Trav3-4A0A075B654 114 aa9.4□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Rpl36-ps4A0A140T8U4 117 aa9.4□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Prss29Q99MS4 279 aa9.4□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Stpg1Q9D2F5 341 aa9.4□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Svs5P30933 122 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Tmem40Q4FJU9 225 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Ccl12Q62401 104 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Msrb2Q78J03 175 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Phpt1Q9DAK9 124 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 OtorQ9JIE3 128 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 ArtnQ9Z0L2 224 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Gm45717A0A1B0GT68 152 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Psmg4P0C7N9 123 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Gm10188Q3V432 135 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 MycbQ6P8Z1 170 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Mogat1Q91ZV4 335 aa9.39□□□□□ -0.91
Ndc1-204ENSMUST00000139560 Trav12d-3A0A075B6A4 115 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 221.8 ms