RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Gm28778A0A087WSK7 233 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Ighv1-18A0A0A6YXN4 117 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Cxcl13O55038 109 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 P01788 123 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Igkv4-58A0A0G2JGI6 119 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Q91WE4 72 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Csrp1P97315 193 aaKnown RBP14.21□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Pfn2Q9JJV2 140 aa14.21□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Frem3Q5H8B9 2123 aa14.21□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Chchd5Q9CQP3 110 aa14.21□□□□□ -0.13
Pcf11-201ENSMUST00000119954 PpbpQ9EQI5 113 aa14.21□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Tmem243B2RVB9 118 aa14.21□□□□□ -0.13
Pcf11-201ENSMUST00000119954 P01787 123 aa14.21□□□□□ -0.13
Pcf11-201ENSMUST00000119954 P01812 117 aa14.21□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Gm10188Q3V432 135 aa14.21□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Tctex1d4Q8CDY7 219 aa14.21□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Ighv1-80A0A075B5Y3 117 aa14.21□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Ccl25O35903 144 aa14.21□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Ighv1-62-3P01754 117 aa14.21□□□□□ -0.14
Pcf11-201ENSMUST00000119954 ElaneQ3UP87 265 aa14.2□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Tcl1b2P56841 117 aa14.2□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Reg3dQ9QUS9 175 aa14.2□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Mpv17l2Q8VIK2 200 aa14.2□□□□□ -0.14
Pcf11-201ENSMUST00000119954 PhipQ8VDD9 1821 aaKnown RBP14.2□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Ighv1-9A0A0A6YW37 117 aa14.2□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Trav14n-2A0A0G2JDF5 121 aa14.2□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Cacna1hO88427 2365 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Foxl2O88470 375 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Trav4n-4A0A075B615 110 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Igkv13-85A0A075B666 115 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Gm20726G3UX18 150 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Dock2Q8C3J5 1828 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Trav9d-1A0A075B699 112 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Gm33815A0A087WNV3 176 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Pear1Q8VIK5 1034 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Pygo1Q9D0P5 417 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Sp5Q9JHX2 398 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Heatr1G3X9B1 2143 aaKnown RBP14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 IappP12968 93 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 P18528 98 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Defb30Q30KN4 75 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Ighv1-62-2A0A0A6YXZ4 119 aa14.19□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Ighv1-81A0A075B5Y4 117 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Msrb3Q8BU85 253 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Gm15128A2ADW8 449 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Tcl1b4P56844 120 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Hrct1Q9D6B9 109 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Igkv4-69A0A0B4J1I6 116 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Gm7257D3YX25 99 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Igkv20-101-2A0A0G2JDU3 113 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 H2al1jA2BFR3 109 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Eid2bE9Q2Y0 151 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Nhsl1Q8CAF4 1587 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Pappa2E9PZ87 1789 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Trpm7Q923J1 1863 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 A530064D06RikQ8BNV8 229 aa14.18□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Igkv4-78A0A0A6YYE5 119 aa14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 P01680 129 aa14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Gata1P17679 413 aa14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Lage3Q9CR70 148 aa14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Erdr1J3QMM0 206 aa14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Gm4763Q8CFJ5 196 aa14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Shank1D3YZU1 2167 aa14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Supt4h1bQ9Z199 117 aa14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Ncor2Q9WU42 2472 aaKnown RBP14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Sptbn2Q68FG2 2388 aa14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Igkv4-79A0A075B5L8 119 aa14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Ndufa4Q62425 82 aaKnown RBP14.17□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Il22ra2Q80XF5 230 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Klhdc3Q8VEM9 382 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Kif26bQ7TNC6 2112 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Fam24aQ8CF27 98 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Nup214Q80U93 2085 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Igkv4-57A0A0A6YYE7 117 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Id3P41133 119 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Rhno1Q8K3A4 235 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 RtbdnQ8QZY4 247 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 KprpB2RUR4 657 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Lect2O88803 151 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Akap6E9Q9K8 2307 aa14.16□□□□□ -0.14
Pcf11-201ENSMUST00000119954 P01790 122 aa14.15□□□□□ -0.14
Pcf11-201ENSMUST00000119954 P0C1Z5 52 aa14.15□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Trav14-2A0A075B694 121 aa14.15□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Svs5P30933 122 aa14.15□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Gm20878L7N244 103 aa14.15□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Tomm6Q9CQN3 74 aa14.15□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Gm20481G3UXK4 153 aa14.15□□□□□ -0.14
Pcf11-201ENSMUST00000119954 Scn5aQ9JJV9 2019 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Ighv1-31A0A0A6YWK5 117 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Gm6040Q4QY32 63 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 EpopQ7TNS8 369 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 P01655 112 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Igkv8-16A0A0G2JDG9 121 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 4930546C10RikE9Q4Y3 121 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Igll1P20764 209 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 CtsgP28293 261 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Q80X32 188 aaKnown RBP14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 COA4Q8BT51 87 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Abca1P41233 2261 aa14.14□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Dock8Q8C147 2100 aa14.14□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 134.7 ms