RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Srsf9Q9D0B0 222 aaKnown RBP6.03□□□□□ -1.44
Bdnf-209ENSMUST00000111050 Lyg1Q9D7Q0 197 aa6.03□□□□□ -1.44
Bdnf-209ENSMUST00000111050 Prss38Q3UKY7 322 aa6.03□□□□□ -1.44
Bdnf-209ENSMUST00000111050 Samd10Q7TST3 202 aa6.03□□□□□ -1.44
Bdnf-209ENSMUST00000111050 Prr30Q9D9B7 401 aa6.03□□□□□ -1.44
Bdnf-209ENSMUST00000111050 Cep290Q6A078 2472 aa6.03□□□□□ -1.44
Bdnf-209ENSMUST00000111050 Hbb-bsA8DUK4 147 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Hbb-b1P02088 147 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 VegfbP49766 207 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Rbfox3Q8BIF2 374 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 BB014433Q8C5R5 389 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Gm17324Q8C6J8 137 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 QrfpQ8CE23 124 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 AamdcQ8R0P4 122 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Ifi27l2aQ8R412 90 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Chac2Q9CQG1 178 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Cep295Q8BQ48 2412 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Gm29644A0A087WPG2 191 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Ighv5-12-4A0A0A6YWG4 117 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Gm21983D6RFS9 131 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 1700003H04RikE9PXM2 192 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Ccl2P10148 148 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 PgfP49764 158 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 CampP51437 172 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Gm10735Q3US96 136 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Samd5Q3V1H9 173 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Trav8d-2Q5R1B6 112 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Snrnp40Q6PE01 358 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Spink2Q8BMY7 86 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 3100002H09RikQ9CXW6 140 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 AspmQ8CJ27 3122 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Trav5-1A0A075B5Z7 114 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 TracA0A075B662 137 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Olfr364-ps1A0A140T8Q2 307 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Tmem92B7ZWI3 162 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Gm20481G3UXK4 153 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Casp16-psI6L890 176 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 TcraP01849 138 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Defb46Q4QY34 57 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 D630044L22RikQ8C701 164 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Prss29Q99MS4 279 aa6.02□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Ighv7-4A0A0A6YXL5 121 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Samt3A2ARK7 233 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Ndufa1O35683 70 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 P18529 117 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Atp6v0e2Q91XE7 81 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 ApomQ9Z1R3 190 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 MgaA2AWL7 3003 aaKnown RBP6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Lrrc37aB1AWG4 3215 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Ighv9-4A0A0A6YWH6 117 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Ighv9-2A0A0B4J1J4 117 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Trav7-5A0A0G2JFX6 112 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Olfr898L7N1Z5 316 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Sod1P08228 154 aaKnown RBP6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Asphd1Q2TA57 360 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 7420426K07RikQ3UX66 186 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 NpbQ8K4P1 119 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Chac1Q8R3J5 223 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 TctaQ8VEA7 122 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Csmd1Q923L3 3564 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Trav14-2A0A075B694 121 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Gm10251J3QPM5 127 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 IappP12968 93 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Srsf1Q6PDM2 248 aaKnown RBP6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Map1lc3aQ91VR7 121 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Nav2E9Q842 2432 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 CadB2RQC6 2225 aa6.01□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Nxph4G3X9N5 304 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 P04943 107 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Cxcl10P17515 98 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 PlnP61014 52 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Wdr31Q9JHB4 367 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 TprF6ZDS4 2431 aaKnown RBP6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Trav9d-1A0A075B699 112 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Gm44965A0A0N4SVR3 59 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Zfp950A0A0U1RQ46 609 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Nat8b-psE0CYC6 232 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Smim1P0C8K7 78 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Tcl1b4P56844 120 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 MdfiP70331 251 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 ElaneQ3UP87 265 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Fxyd3Q61835 88 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Slc25a39Q9D8K8 359 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 OtorQ9JIE3 128 aa6□□□□□ -1.45
Bdnf-209ENSMUST00000111050 P18530 117 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Immp1lQ9CQU8 166 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Defa1P11477 93 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 NdpP48744 131 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Khdc1aQ3UWR2 166 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Gm9961Q8BNV2 113 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 B430305J03RikQ8BQQ8 176 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Klk15Q8CGR4 254 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Ubtd1Q91WB7 227 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Gm6525A0A0A6YW33 106 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Vma21-psA0A140T8R2 101 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 KprpB2RUR4 657 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Fam240aJ3QNP9 97 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Ptrh2Q8R2Y8 181 aaKnown RBP5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Chchd5Q9CQP3 110 aa5.99□□□□□ -1.45
Bdnf-209ENSMUST00000111050 Q9CX63 252 aa5.99□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms