RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Hoxb4P10284 250 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm10203F6QJ09 66 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 DdtO35215 118 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 H2-DMb1P35737 261 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Scgb1b19F6WYW0 93 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Defa37K9J724 93 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Defa5P28312 93 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Pom121l2Q5SW25 972 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Lyg1Q9D7Q0 197 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Ptprz1B9EKR1 2312 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm5294J3QP53 216 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Zfp36l1P23950 338 aa9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Mrpl53Q9D1H8 118 aaKnown RBP9.38□□□□□ -0.91
Pcif1-201ENSMUST00000041643 P04943 107 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Spock3Q8BKV0 436 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Bhlha15Q9QYC3 197 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 TcraP01849 138 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Mc5rP41149 325 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gng7Q61016 68 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Ormdl2Q9CQZ0 153 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Rbmxl2Q9DAE2 385 aaKnown RBP9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Pla2g2cP48076 150 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm5148Q8BGG2 154 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm5868Q8BJG1 145 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Lgals6O54891 301 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm16686Q3UMN9 131 aa9.37□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Ighv8-6A0A0A6YXA3 118 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Ang5Q5GAN1 145 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 9230109A22RikQ8BHE6 111 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Pth2Q91W27 100 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Plekhb2Q9QZC7 221 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Pcnx3Q8VI59 2028 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm3285A0A1W2P7U0 201 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 PlnP61014 52 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Smim10l1A0A087WNQ7 89 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm10842Q3U587 122 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Ighv5-6A0A075B5Q0 117 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gpr82Q8BZR0 328 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Tomm7Q9D173 55 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm26920S4R2A5 56 aa9.36□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Olfr745Q7TRL9 328 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Leap2Q91V13 76 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Dkk2Q9QYZ8 259 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Sptbn2Q68FG2 2388 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm9573F7C950 1606 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm33815A0A087WNV3 176 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Nbl1Q61477 178 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 KprpB2RUR4 657 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm94Q3V2D2 93 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Lyzl4Q9D925 145 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Pradc1Q9D9N8 188 aa9.35□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Smim13E9Q942 88 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 TtrP07309 147 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 S100a8P27005 89 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Cops9Q3U898 57 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 BC106179Q8C9L1 186 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Hist3h2bbQ8CGP0 126 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Hist3h2baQ9D2U9 126 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Defa3P28310 93 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Defa10P50708 93 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Defa15P50713 93 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Nit2Q9JHW2 276 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm9925F6T2U3 160 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 P01658 132 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Hist1h2bfP10853 126 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 BlcapP62951 87 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Hist1h2bbQ64475 126 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm9949Q8C9F4 104 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Hist1h2bkQ8CGP1 126 aaKnown RBP9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Hist1h2bpQ8CGP2 126 aaKnown RBP9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Mrpl32Q9DCI9 187 aaKnown RBP9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Dnajc13D4AFX7 2248 aaKnown RBP9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Ighv5-9-1A0A0A6YVS4 126 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Samd10Q7TST3 202 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Q8R092 253 aa9.34□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Rpl24Q8BP67 157 aaKnown RBP9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Ighv8-4A0A0A6YW26 117 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Tmem256Q5F285 113 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Q9DAA3 117 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 H2al1jA2BFR3 109 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm15557A6PWY0 234 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 RhohQ9D3G9 191 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm20481G3UXK4 153 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Lsm4Q9QXA5 137 aaKnown RBP9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Trav6d-7A0A075B6B0 112 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm17455G3UW87 128 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Reg3gO09049 174 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Plpp2Q9DAX2 276 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 PerpQ9JK95 193 aa9.33□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm9242J3QNY1 357 aa9.32□□□□□ -0.92
Pcif1-201ENSMUST00000041643 P01736 120 aa9.32□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Ighv8-2A0A0A6YW58 119 aa9.32□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gtsf1lQ9CWD0 151 aa9.32□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Jmjd1cQ69ZK6 2350 aa9.32□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Zfp950A0A0U1RQ46 609 aa9.32□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Fam24aQ8CF27 98 aa9.32□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm6899Q3USS0 134 aa9.32□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Q8C708 225 aa9.32□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Cdpf1Q8R3A2 119 aa9.32□□□□□ -0.92
Pcif1-201ENSMUST00000041643 P01786 117 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms