RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Gm9602J3QPD5 205 aa17.63■□□□□ 0.41
Cln6-201ENSMUST00000034776 Onecut2Q6XBJ3 505 aa17.63■□□□□ 0.41
Cln6-201ENSMUST00000034776 Rnf24Q8BGI1 148 aa17.63■□□□□ 0.41
Cln6-201ENSMUST00000034776 Ndufv3Q8BK30 104 aaKnown RBP17.63■□□□□ 0.41
Cln6-201ENSMUST00000034776 Arid1bE9Q4N7 2244 aa17.63■□□□□ 0.41
Cln6-201ENSMUST00000034776 Col7a1Q63870 2944 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Plcxd2B2RXA1 340 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Pafah1b2Q61206 229 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Gm11733Q8BQP1 125 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Trpt1Q8K3A2 249 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Prelid1Q8R107 217 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Timm10bQ9WV96 100 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Gm20379A0A087WR34 119 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Gm4565A0A140LJ87 301 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Gm6176J3QK59 301 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Vamp3P63024 103 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Gm4567Q3UTA8 301 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Muc15Q8C6Z1 331 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Olfr954Q9EQB6 314 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 GlmpQ9JHJ3 404 aa17.62■□□□□ 0.41
Cln6-201ENSMUST00000034776 Gm10118Q8C8J5 116 aa17.61■□□□□ 0.41
Cln6-201ENSMUST00000034776 Rasl10aQ8K5A4 203 aa17.61■□□□□ 0.41
Cln6-201ENSMUST00000034776 Bahcc1Q3UHR0 2643 aa17.61■□□□□ 0.41
Cln6-201ENSMUST00000034776 Rhox7bA6PW38 321 aa17.6■□□□□ 0.41
Cln6-201ENSMUST00000034776 Jpt2Q6PGH2 190 aaKnown RBP17.6■□□□□ 0.41
Cln6-201ENSMUST00000034776 Q9CR34 168 aa17.6■□□□□ 0.41
Cln6-201ENSMUST00000034776 AhspQ9CY02 102 aa17.6■□□□□ 0.41
Cln6-201ENSMUST00000034776 Gosr1O88630 250 aa17.6■□□□□ 0.41
Cln6-201ENSMUST00000034776 Bri3P28662 125 aa17.6■□□□□ 0.41
Cln6-201ENSMUST00000034776 Olfr1404Q8VGE1 313 aa17.6■□□□□ 0.41
Cln6-201ENSMUST00000034776 Trav7-5A0A0G2JFX6 112 aa17.59■□□□□ 0.41
Cln6-201ENSMUST00000034776 Cited2O35740 269 aa17.59■□□□□ 0.41
Cln6-201ENSMUST00000034776 Defa-rs1P17533 116 aa17.59■□□□□ 0.41
Cln6-201ENSMUST00000034776 Gm10842Q3U587 122 aa17.59■□□□□ 0.41
Cln6-201ENSMUST00000034776 Srsf12Q8C8K3 266 aa17.59■□□□□ 0.41
Cln6-201ENSMUST00000034776 Nat6Q9R123 314 aa17.59■□□□□ 0.41
Cln6-201ENSMUST00000034776 Smad7O35253 426 aa17.59■□□□□ 0.41
Cln6-201ENSMUST00000034776 Lrcol1Q3URS3 161 aa17.59■□□□□ 0.41
Cln6-201ENSMUST00000034776 Olfr1402Q8VET1 320 aa17.59■□□□□ 0.41
Cln6-201ENSMUST00000034776 Slc25a2Q99ML6 265 aa17.59■□□□□ 0.41
Cln6-201ENSMUST00000034776 ColqO35348 457 aa17.58■□□□□ 0.4
Cln6-201ENSMUST00000034776 Defb2P82020 71 aa17.58■□□□□ 0.4
Cln6-201ENSMUST00000034776 Hyls1Q9CXX0 307 aa17.58■□□□□ 0.4
Cln6-201ENSMUST00000034776 Trav14d-1A0A075B6B1 121 aa17.57■□□□□ 0.4
Cln6-201ENSMUST00000034776 Tmem140Q8BGY5 185 aa17.57■□□□□ 0.4
Cln6-201ENSMUST00000034776 Spock3Q8BKV0 436 aa17.57■□□□□ 0.4
Cln6-201ENSMUST00000034776 Gm9961Q8BNV2 113 aa17.57■□□□□ 0.4
Cln6-201ENSMUST00000034776 Dpm3Q9D1Q4 92 aa17.57■□□□□ 0.4
Cln6-201ENSMUST00000034776 Znf641Q8BZ34 422 aa17.57■□□□□ 0.4
Cln6-201ENSMUST00000034776 QrfpQ8CE23 124 aa17.57■□□□□ 0.4
Cln6-201ENSMUST00000034776 Mast4Q811L6 2618 aa17.56■□□□□ 0.4
Cln6-201ENSMUST00000034776 Sub1P11031 127 aaKnown RBP17.56■□□□□ 0.4
Cln6-201ENSMUST00000034776 Gm10188Q3V432 135 aa17.56■□□□□ 0.4
Cln6-201ENSMUST00000034776 Fbln7Q501P1 440 aa17.56■□□□□ 0.4
Cln6-201ENSMUST00000034776 Ighv1-16A0A075B5U1 98 aa17.55■□□□□ 0.4
Cln6-201ENSMUST00000034776 Ighv1-80A0A075B5Y3 117 aa17.55■□□□□ 0.4
Cln6-201ENSMUST00000034776 Trav16nA0A075B634 117 aa17.55■□□□□ 0.4
Cln6-201ENSMUST00000034776 Trav6-4A0A075B6B4 115 aa17.55■□□□□ 0.4
Cln6-201ENSMUST00000034776 Fgf5P15656 264 aa17.55■□□□□ 0.4
Cln6-201ENSMUST00000034776 Igkv4-57-1A0A075B5M4 119 aa17.54■□□□□ 0.4
Cln6-201ENSMUST00000034776 CebpgP53568 150 aa17.54■□□□□ 0.4
Cln6-201ENSMUST00000034776 Prima1Q810F0 153 aa17.54■□□□□ 0.4
Cln6-201ENSMUST00000034776 Vmn1r63Q9EPT1 300 aa17.54■□□□□ 0.4
Cln6-201ENSMUST00000034776 Prrc2aQ7TSC1 2158 aaKnown RBP17.54■□□□□ 0.4
Cln6-201ENSMUST00000034776 Unc79Q0KK59 2596 aa17.54■□□□□ 0.4
Cln6-201ENSMUST00000034776 Trdv2-2Q5R1A4 116 aa17.54■□□□□ 0.4
Cln6-201ENSMUST00000034776 Ceacam11Q9D0Z8 303 aa17.54■□□□□ 0.4
Cln6-201ENSMUST00000034776 Ramp1Q9WTJ5 148 aa17.54■□□□□ 0.4
Cln6-201ENSMUST00000034776 Ankrd17Q99NH0 2603 aaKnown RBP17.53■□□□□ 0.4
Cln6-201ENSMUST00000034776 Igkv4-71A0A0G2JEH0 117 aa17.53■□□□□ 0.4
Cln6-201ENSMUST00000034776 Igkv4-81A0A0G2JEY5 119 aa17.53■□□□□ 0.4
Cln6-201ENSMUST00000034776 Trav14-3A0A075B607 120 aa17.53■□□□□ 0.4
Cln6-201ENSMUST00000034776 Gm42420A0A0J9YUQ2 99 aa17.53■□□□□ 0.4
Cln6-201ENSMUST00000034776 Shisal1Q0VBP7 198 aa17.53■□□□□ 0.4
Cln6-201ENSMUST00000034776 Olfr1339Q8VGB1 315 aa17.53■□□□□ 0.4
Cln6-201ENSMUST00000034776 Cyyr1Q8VIH7 165 aa17.53■□□□□ 0.4
Cln6-201ENSMUST00000034776 UrahQ9CRB3 118 aa17.53■□□□□ 0.4
Cln6-201ENSMUST00000034776 Akap6E9Q9K8 2307 aa17.52■□□□□ 0.4
Cln6-201ENSMUST00000034776 Atp5iQ06185 71 aaKnown RBP17.52■□□□□ 0.4
Cln6-201ENSMUST00000034776 Zfp248Q640N4 576 aa17.52■□□□□ 0.4
Cln6-201ENSMUST00000034776 Gm5105Q8C6Y9 112 aa17.52■□□□□ 0.4
Cln6-201ENSMUST00000034776 Ccl24Q9JKC0 119 aa17.52■□□□□ 0.4
Cln6-201ENSMUST00000034776 Crip3Q6Q6R3 243 aa17.51■□□□□ 0.39
Cln6-201ENSMUST00000034776 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP17.51■□□□□ 0.39
Cln6-201ENSMUST00000034776 Acrv1P50289 261 aa17.51■□□□□ 0.39
Cln6-201ENSMUST00000034776 Srsf2Q62093 221 aaKnown RBP17.51■□□□□ 0.39
Cln6-201ENSMUST00000034776 Nudt3Q9JI46 168 aa17.51■□□□□ 0.39
Cln6-201ENSMUST00000034776 Gm5218F6YH22 154 aa17.5■□□□□ 0.39
Cln6-201ENSMUST00000034776 Mmp23O88676 391 aa17.5■□□□□ 0.39
Cln6-201ENSMUST00000034776 Odf1Q61999 247 aa17.5■□□□□ 0.39
Cln6-201ENSMUST00000034776 Fam19a2Q7TPG7 131 aa17.5■□□□□ 0.39
Cln6-201ENSMUST00000034776 Q9DAB9 146 aa17.5■□□□□ 0.39
Cln6-201ENSMUST00000034776 Ank2Q8C8R3 3898 aa17.5■□□□□ 0.39
Cln6-201ENSMUST00000034776 Hcfc2Q9D968 241 aa17.5■□□□□ 0.39
Cln6-201ENSMUST00000034776 Rchy1Q9CR50 261 aa17.49■□□□□ 0.39
Cln6-201ENSMUST00000034776 Scgb1b10A0A087WPW0 93 aa17.48■□□□□ 0.39
Cln6-201ENSMUST00000034776 Megf10Q6DIB5 1147 aa17.48■□□□□ 0.39
Cln6-201ENSMUST00000034776 OpalinQ7M750 143 aa17.48■□□□□ 0.39
Cln6-201ENSMUST00000034776 EpcamQ99JW5 315 aa17.48■□□□□ 0.39
Cln6-201ENSMUST00000034776 Rps20P60867 119 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 96.7 ms