RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Ighv3-1A0A075B5S6 116 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Trav6-6A0A075B603 114 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 TbpP29037 316 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 RhogP84096 191 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Adam8Q05910 826 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Spink2Q8BMY7 86 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Tmem160Q9D938 188 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Nat8f4G5E8L3 226 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Gp9O88186 177 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Tdgf1P51865 171 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Sh3bgrl2Q8BG73 107 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Trpt1Q8K3A2 249 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Cotl1Q9CQI6 142 aa11.67□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Ubr5Q80TP3 2792 aa11.66□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Pla2g2cP48076 150 aa11.66□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Ang6Q5GAN0 147 aa11.66□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Card19Q9D1I2 183 aa11.66□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Gm15294V9GXA7 121 aa11.66□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 CrygbP04344 175 aa11.66□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Pmis2Q497Q9 96 aa11.66□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Zfp92Q62396 488 aa11.66□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 QrfpQ8CE23 124 aa11.66□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Olfr1431Q8VF59 312 aa11.66□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Ube2e1P52482 193 aa11.65□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Hyls1Q9CXX0 307 aa11.65□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 AhspQ9CY02 102 aa11.65□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Ncor2Q9WU42 2472 aaKnown RBP11.65□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Sptbn1Q62261 2363 aaKnown RBP11.65□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Gm17727E9Q4V7 109 aa11.65□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Obox7Q4KL20 218 aa11.65□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Rnf24Q8BGI1 148 aa11.65□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Tppp3Q9CRB6 176 aaKnown RBP11.65□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Cend1Q9JKC6 149 aa11.65□□□□□ -0.54
Nkx3-1-201ENSMUST00000022646 Igkv4-90A0A075B5L3 117 aa11.65□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Ighv5-8A0A075B676 92 aa11.65□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Cited1P97769 203 aa11.65□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Znf575Q3TXZ1 239 aa11.65□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Gm10118Q8C8J5 116 aa11.65□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Gm15292L7N231 93 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Prrx2Q06348 247 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Defa26Q3L180 93 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Gm5105Q8C6Y9 112 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Lamtor2Q9JHS3 125 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Trav14n-2A0A0G2JDF5 121 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Esp38A8R0X1 80 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Gm1968Q3T9I3 115 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Prima1Q810F0 153 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 NpbQ8K4P1 119 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Vmn1r63Q9EPT1 300 aa11.64□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Med13lQ6JPI3 2207 aa11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Gm10036E9PYL9 178 aaKnown RBP11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Ly6lH3BJG9 140 aa11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Cypt1Q8CH20 168 aa11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Olfr365Q8VFT2 312 aa11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Malsu1Q9CWV0 228 aa11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 ApomQ9Z1R3 190 aa11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Casp6O08738 276 aa11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Atp5iQ06185 71 aaKnown RBP11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Nbl1Q61477 178 aa11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Bub3Q9WVA3 326 aa11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Lrrk2Q5S006 2527 aa11.63□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Itpr1P11881 2749 aa11.62□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Trav6n-6A0A075B6B2 114 aa11.62□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Trav21-dv12A0A075B6C4 109 aa11.62□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Ighv1-20A0A0A6YX66 117 aa11.62□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Klk15Q8CGR4 254 aa11.62□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Rps20P60867 119 aaKnown RBP11.62□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Lmo4P61969 165 aa11.62□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Gm5941Q497P9 117 aa11.62□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Trappc1Q5NCF2 145 aa11.62□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Obox8V9GWY9 217 aa11.62□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Gm5157A0A087WRH8 301 aa11.61□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Tmem141A2AJB2 108 aa11.61□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Tcrg-V6A0A075B5Y8 134 aa11.61□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Omt2bD3YX29 119 aa11.61□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Itgb1bp1O35671 200 aa11.61□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Vsig8Q6P3A4 417 aa11.6□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Q9D131 166 aa11.6□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 A0A1Y7VMQ4 148 aa11.6□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 PdpnQ62011 172 aa11.6□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Ang2Q64438 145 aa11.6□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Tctex1d1Q9D5I4 173 aa11.6□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Dopey2Q3UHQ6 2295 aa11.6□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Csmd2V9GX34 3611 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Igkv4-59A0A0B4J1I8 117 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Gm765B2RVL9 189 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 1700056E22RikF7CNM6 234 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Gm20517G3UVU6 152 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Tnfrsf9P20334 256 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 AW146154Q3TPQ7 468 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Wfdc15bQ9JHY4 80 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Ighv2-6A0A075B6A7 116 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Cd24P24807 76 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Hnrnpa3Q8BG05 379 aaKnown RBP11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Defa22Q8C1N8 93 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 D630044L22RikQ8C701 164 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Ammecr1lQ8JZZ6 310 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 EsdQ9R0P3 282 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Igkv4-81A0A0G2JEY5 119 aa11.59□□□□□ -0.55
Nkx3-1-201ENSMUST00000022646 Tstd1E9PY03 133 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms