RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 FRYQ5TBA9 3013 aa-0.87□□□□□ -2.55
KNTC1-213ENST00000542727 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.87□□□□□ -2.55
KNTC1-213ENST00000542727 ATMQ13315 3056 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 ADGRG4Q8IZF6 3080 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 CENPEQ02224 2701 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 IQCF6A8MYZ5 107 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 H0YAA0 97 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 MT-ATP8P03928 68 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 SMIM11AP58511 58 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 S100A10P60903 97 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 DEFB110Q30KQ9 67 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 DNAH8Q96JB1 4490 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 NRXN1Q9ULB1 1477 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 PREX1Q8TCU6 1659 aa-0.88□□□□□ -2.55
KNTC1-213ENST00000542727 C5orf42Q9H799 3197 aa-0.89□□□□□ -2.55
KNTC1-213ENST00000542727 MT1GP13640 62 aa-0.89□□□□□ -2.55
KNTC1-213ENST00000542727 LINC00158P58513 81 aa-0.89□□□□□ -2.55
KNTC1-213ENST00000542727 PRLHP81277 87 aa-0.89□□□□□ -2.55
KNTC1-213ENST00000542727 SMG1Q96Q15 3661 aaKnown RBP-0.9□□□□□ -2.55
KNTC1-213ENST00000542727 MT1EP04732 61 aa-0.9□□□□□ -2.55
KNTC1-213ENST00000542727 ALKQ9UM73 1620 aa-0.9□□□□□ -2.55
KNTC1-213ENST00000542727 LRRC7Q96NW7 1537 aa-0.9□□□□□ -2.55
KNTC1-213ENST00000542727 SPENQ96T58 3664 aaKnown RBP-0.91□□□□□ -2.55
KNTC1-213ENST00000542727 ZFHX4Q86UP3 3567 aa-0.91□□□□□ -2.55
KNTC1-213ENST00000542727 FYCO1Q9BQS8 1478 aa-0.91□□□□□ -2.55
KNTC1-213ENST00000542727 LINC00587B1AMM8 73 aa-0.91□□□□□ -2.56
KNTC1-213ENST00000542727 DEFB1P60022 68 aa-0.91□□□□□ -2.56
KNTC1-213ENST00000542727 WFDC9Q8NEX5 89 aa-0.91□□□□□ -2.56
KNTC1-213ENST00000542727 MT1LQ93083 61 aa-0.91□□□□□ -2.56
KNTC1-213ENST00000542727 DPY30Q9C005 99 aa-0.91□□□□□ -2.56
KNTC1-213ENST00000542727 RGPD8O14715 1765 aaPredicted RBP-0.91□□□□□ -2.56
KNTC1-213ENST00000542727 RGPD5Q99666 1765 aa-0.91□□□□□ -2.56
KNTC1-213ENST00000542727 DNAH10Q8IVF4 4471 aa-0.91□□□□□ -2.56
KNTC1-213ENST00000542727 CSMD2Q7Z408 3487 aa-0.92□□□□□ -2.56
KNTC1-213ENST00000542727 UBR3Q6ZT12 1888 aa-0.92□□□□□ -2.56
KNTC1-213ENST00000542727 MAP3K1Q13233 1512 aa-0.92□□□□□ -2.56
KNTC1-213ENST00000542727 HMGN2P05204 90 aaKnown RBP-0.92□□□□□ -2.56
KNTC1-213ENST00000542727 PEA15Q15121 130 aa-0.92□□□□□ -2.56
KNTC1-213ENST00000542727 EPRSP07814 1512 aaKnown RBP-0.93□□□□□ -2.56
KNTC1-213ENST00000542727 PRUNE2Q8WUY3 3088 aa-0.93□□□□□ -2.56
KNTC1-213ENST00000542727 SMR3BP02814 79 aaPredicted RBP-0.93□□□□□ -2.56
KNTC1-213ENST00000542727 MT1FP04733 61 aa-0.93□□□□□ -2.56
KNTC1-213ENST00000542727 KRTAP19-5Q3LI72 72 aa-0.93□□□□□ -2.56
KNTC1-213ENST00000542727 TCEAL7Q9BRU2 100 aa-0.93□□□□□ -2.56
KNTC1-213ENST00000542727 BPTFQ12830 3046 aa-0.94□□□□□ -2.56
KNTC1-213ENST00000542727 ZFYVE16Q7Z3T8 1539 aa-0.94□□□□□ -2.56
KNTC1-213ENST00000542727 TRRAPQ9Y4A5 3859 aa-0.94□□□□□ -2.56
KNTC1-213ENST00000542727 TRAV21A0A0B4J279 112 aa-0.94□□□□□ -2.56
KNTC1-213ENST00000542727 NDUFB1O75438 58 aa-0.94□□□□□ -2.56
KNTC1-213ENST00000542727 ATP7BP35670 1465 aa-0.94□□□□□ -2.56
KNTC1-213ENST00000542727 TEX14Q8IWB6 1497 aa-0.94□□□□□ -2.56
KNTC1-213ENST00000542727 C4AP0C0L4 1744 aa-0.95□□□□□ -2.56
KNTC1-213ENST00000542727 C4BP0C0L5 1744 aa-0.95□□□□□ -2.56
KNTC1-213ENST00000542727 PKD1L3Q7Z443 1732 aa-0.95□□□□□ -2.56
KNTC1-213ENST00000542727 IFI6P09912 130 aa-0.95□□□□□ -2.56
KNTC1-213ENST00000542727 S100PP25815 95 aa-0.95□□□□□ -2.56
KNTC1-213ENST00000542727 KRTAP8-1Q8IUC2 63 aa-0.95□□□□□ -2.56
KNTC1-213ENST00000542727 FANCAO15360 1455 aa-0.95□□□□□ -2.56
KNTC1-213ENST00000542727 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.95□□□□□ -2.56
KNTC1-213ENST00000542727 QSER1Q2KHR3 1735 aa-0.95□□□□□ -2.56
KNTC1-213ENST00000542727 CRYBG1Q9Y4K1 1723 aa-0.95□□□□□ -2.56
KNTC1-213ENST00000542727 PLIN4Q96Q06 1357 aa-0.96□□□□□ -2.56
KNTC1-213ENST00000542727 ATP10BO94823 1461 aa-0.96□□□□□ -2.56
KNTC1-213ENST00000542727 GYPAP02724 150 aa-0.96□□□□□ -2.56
KNTC1-213ENST00000542727 CRYBG3Q68DQ2 2970 aa-0.96□□□□□ -2.56
KNTC1-213ENST00000542727 DEFB106AQ8N104 65 aa-0.96□□□□□ -2.56
KNTC1-213ENST00000542727 PLXNC1O60486 1568 aa-0.96□□□□□ -2.56
KNTC1-213ENST00000542727 MYH4Q9Y623 1939 aa-0.97□□□□□ -2.56
KNTC1-213ENST00000542727 ACBD7Q8N6N7 88 aa-0.97□□□□□ -2.56
KNTC1-213ENST00000542727 RANBP2P49792 3224 aaKnown RBP-0.97□□□□□ -2.57
KNTC1-213ENST00000542727 MAGI3Q5TCQ9 1506 aa-0.98□□□□□ -2.57
KNTC1-213ENST00000542727 FREM2Q5SZK8 3169 aa-0.98□□□□□ -2.57
KNTC1-213ENST00000542727 ACYP1P07311 99 aa-0.98□□□□□ -2.57
KNTC1-213ENST00000542727 IAPPP10997 89 aa-0.98□□□□□ -2.57
KNTC1-213ENST00000542727 RBP2P50120 134 aa-0.98□□□□□ -2.57
KNTC1-213ENST00000542727 USP32Q8NFA0 1604 aa-0.98□□□□□ -2.57
KNTC1-213ENST00000542727 CLTCQ00610 1675 aaKnown RBP-0.98□□□□□ -2.57
KNTC1-213ENST00000542727 MYMXA0A1B0GTQ4 84 aa-0.99□□□□□ -2.57
KNTC1-213ENST00000542727 LYNX1G3V0Z9 82 aa-0.99□□□□□ -2.57
KNTC1-213ENST00000542727 DEFB130BP0DP73 79 aa-0.99□□□□□ -2.57
KNTC1-213ENST00000542727 DEFB130AP0DP74 79 aa-0.99□□□□□ -2.57
KNTC1-213ENST00000542727 IFI27P40305 119 aaPredicted RBP-0.99□□□□□ -2.57
KNTC1-213ENST00000542727 C14orf144Q96I85 54 aa-0.99□□□□□ -2.57
KNTC1-213ENST00000542727 CNTLNQ9NXG0 1405 aa-0.99□□□□□ -2.57
KNTC1-213ENST00000542727 BAZ1AQ9NRL2 1556 aaPredicted RBP-1□□□□□ -2.57
KNTC1-213ENST00000542727 DEPDC5O75140 1603 aa-1□□□□□ -2.57
KNTC1-213ENST00000542727 NWD1Q149M9 1564 aa-1□□□□□ -2.57
KNTC1-213ENST00000542727 LCE6AA0A183 80 aa-1.01□□□□□ -2.57
KNTC1-213ENST00000542727 CEBPZOSA8MTT3 80 aa-1.01□□□□□ -2.57
KNTC1-213ENST00000542727 ATP6V1G2-DDX39BF2Z307 99 aa-1.01□□□□□ -2.57
KNTC1-213ENST00000542727 M0R143 59 aa-1.01□□□□□ -2.57
KNTC1-213ENST00000542727 NEXMIFQ5QGS0 1516 aa-1.02□□□□□ -2.57
KNTC1-213ENST00000542727 NCMAPQ5T1S8 102 aa-1.02□□□□□ -2.57
KNTC1-213ENST00000542727 CDC42BPGQ6DT37 1551 aa-1.02□□□□□ -2.57
KNTC1-213ENST00000542727 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.02□□□□□ -2.57
KNTC1-213ENST00000542727 WIZO95785 1651 aa-1.03□□□□□ -2.57
KNTC1-213ENST00000542727 SPEGQ15772 3267 aa-1.03□□□□□ -2.57
KNTC1-213ENST00000542727 UMAD1C9J7I0 102 aa-1.03□□□□□ -2.57
KNTC1-213ENST00000542727 CLPSL2Q6UWE3 100 aa-1.03□□□□□ -2.57
KNTC1-213ENST00000542727 C20orf78Q9BR46 151 aa-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms