RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
KNTC1-213ENST00000542727 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
KNTC1-213ENST00000542727 SENP3Q9H4L4 574 aaPredicted RBP14.89□□□□□ -0.03
KNTC1-213ENST00000542727 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
KNTC1-213ENST00000542727 FOXD1Q16676 465 aa13.77□□□□□ -0.21
KNTC1-213ENST00000542727 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
KNTC1-213ENST00000542727 MSH5O43196 834 aa12.98□□□□□ -0.33
KNTC1-213ENST00000542727 PIAS4Q8N2W9 510 aaPredicted RBP12.93□□□□□ -0.34
KNTC1-213ENST00000542727 PPP6R1Q9UPN7 881 aa12.89□□□□□ -0.35
KNTC1-213ENST00000542727 ADRA2BP18089 450 aa12.86□□□□□ -0.35
KNTC1-213ENST00000542727 POTEDQ86YR6 584 aa12.84□□□□□ -0.35
KNTC1-213ENST00000542727 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
KNTC1-213ENST00000542727 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
KNTC1-213ENST00000542727 MAPK8IP2Q13387 824 aaPredicted RBP11.76□□□□□ -0.53
KNTC1-213ENST00000542727 PPP4R3CPQ6ZMV5 832 aa11.66□□□□□ -0.54
KNTC1-213ENST00000542727 CNKSR2Q8WXI2 1034 aa11.48□□□□□ -0.57
KNTC1-213ENST00000542727 HOXD11P31277 338 aaPredicted RBP11.4□□□□□ -0.58
KNTC1-213ENST00000542727 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
KNTC1-213ENST00000542727 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
KNTC1-213ENST00000542727 DCAF8L1A6NGE4 600 aa11.25□□□□□ -0.61
KNTC1-213ENST00000542727 DNAJC5BQ9UF47 199 aa11.09□□□□□ -0.63
KNTC1-213ENST00000542727 NPM3O75607 178 aaKnown RBP11.07□□□□□ -0.64
KNTC1-213ENST00000542727 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
KNTC1-213ENST00000542727 CACNB1Q02641 598 aaPredicted RBP11.01□□□□□ -0.65
KNTC1-213ENST00000542727 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
KNTC1-213ENST00000542727 KCNA4P22459 653 aa10.89□□□□□ -0.67
KNTC1-213ENST00000542727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.67
KNTC1-213ENST00000542727 U3KPZ7 1027 aaPredicted RBP10.6□□□□□ -0.71
KNTC1-213ENST00000542727 SLC4A2P04920 1241 aa10.52□□□□□ -0.73
KNTC1-213ENST00000542727 APLP2Q06481 763 aa10.48□□□□□ -0.73
KNTC1-213ENST00000542727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.46□□□□□ -0.73
KNTC1-213ENST00000542727 HNRNPUL2Q1KMD3 747 aaKnown RBP10.46□□□□□ -0.73
KNTC1-213ENST00000542727 CAPN15O75808 1086 aa10.41□□□□□ -0.74
KNTC1-213ENST00000542727 SPINK5Q9NQ38 1064 aaPredicted RBP10.38□□□□□ -0.75
KNTC1-213ENST00000542727 SAMD1Q6SPF0 538 aaPredicted RBP10.37□□□□□ -0.75
KNTC1-213ENST00000542727 SLC4A1APQ9BWU0 796 aaKnown RBP10.35□□□□□ -0.75
KNTC1-213ENST00000542727 DSG3P32926 999 aa10.33□□□□□ -0.76
KNTC1-213ENST00000542727 ZNF219Q9P2Y4 722 aaPredicted RBP10.32□□□□□ -0.76
KNTC1-213ENST00000542727 MYCNP04198 464 aaPredicted RBP10.3□□□□□ -0.76
KNTC1-213ENST00000542727 TRHP20396 242 aaPredicted RBP10.24□□□□□ -0.77
KNTC1-213ENST00000542727 FOXD4L1Q9NU39 408 aa10.22□□□□□ -0.77
KNTC1-213ENST00000542727 ABCB7O75027 752 aa10.13□□□□□ -0.79
KNTC1-213ENST00000542727 POLA2Q14181 598 aa10□□□□□ -0.81
KNTC1-213ENST00000542727 ZBTB22O15209 634 aa9.98□□□□□ -0.81
KNTC1-213ENST00000542727 ATXN8OSP0DMR3 200 aa9.96□□□□□ -0.82
KNTC1-213ENST00000542727 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
KNTC1-213ENST00000542727 ZBTB12Q9Y330 459 aaPredicted RBP9.93□□□□□ -0.82
KNTC1-213ENST00000542727 ATF5Q9Y2D1 282 aaPredicted RBP9.92□□□□□ -0.82
KNTC1-213ENST00000542727 POTEHQ6S545 545 aa9.88□□□□□ -0.83
KNTC1-213ENST00000542727 AKT1S1Q96B36 256 aa9.7□□□□□ -0.86
KNTC1-213ENST00000542727 FBLN2P98095 1184 aa9.68□□□□□ -0.86
KNTC1-213ENST00000542727 OSCARQ8IYS5 282 aa9.67□□□□□ -0.86
KNTC1-213ENST00000542727 CSRNP3Q8WYN3 585 aa9.63□□□□□ -0.87
KNTC1-213ENST00000542727 CHRDL2Q6WN34 429 aa9.62□□□□□ -0.87
KNTC1-213ENST00000542727 SPDYE2BA6NHP3 402 aa9.58□□□□□ -0.88
KNTC1-213ENST00000542727 SPDYE6P0CI01 402 aa9.58□□□□□ -0.88
KNTC1-213ENST00000542727 SPDYE2Q495Y8 402 aa9.58□□□□□ -0.88
KNTC1-213ENST00000542727 REM2Q8IYK8 340 aaPredicted RBP9.56□□□□□ -0.88
KNTC1-213ENST00000542727 EHMT2Q96KQ7 1210 aa9.54□□□□□ -0.88
KNTC1-213ENST00000542727 MKRN4PQ13434 485 aaPredicted RBP9.5□□□□□ -0.89
KNTC1-213ENST00000542727 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
KNTC1-213ENST00000542727 ZNF692Q9BU19 519 aaPredicted RBP9.44□□□□□ -0.9
KNTC1-213ENST00000542727 SSUH2Q9Y2M2 353 aa9.43□□□□□ -0.9
KNTC1-213ENST00000542727 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
KNTC1-213ENST00000542727 FXR2P51116 673 aaKnown RBP eCLIP9.38□□□□□ -0.91
KNTC1-213ENST00000542727 PIP4P2Q8N4L2 257 aa9.38□□□□□ -0.91
KNTC1-213ENST00000542727 CLEC11AQ9Y240 323 aa9.3□□□□□ -0.92
KNTC1-213ENST00000542727 PABPN1Q86U42 306 aaKnown RBP eCLIP9.28□□□□□ -0.921e-8■■■■■ 32.2
KNTC1-213ENST00000542727 SP7Q8TDD2 431 aaPredicted RBP9.22□□□□□ -0.93
KNTC1-213ENST00000542727 PRKAR2AP13861 404 aaKnown RBP9.21□□□□□ -0.94
KNTC1-213ENST00000542727 HAX1O00165 279 aa9.2□□□□□ -0.94
KNTC1-213ENST00000542727 PRR29P0C7W0 189 aa9.19□□□□□ -0.94
KNTC1-213ENST00000542727 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
KNTC1-213ENST00000542727 STAG3Q9UJ98 1225 aa9.14□□□□□ -0.95
KNTC1-213ENST00000542727 C19orf67A6NJJ6 358 aa9.07□□□□□ -0.96
KNTC1-213ENST00000542727 CHADLQ6NUI6 762 aa9.07□□□□□ -0.96
KNTC1-213ENST00000542727 FARP1Q9Y4F1 1045 aaPredicted RBP9.01□□□□□ -0.97
KNTC1-213ENST00000542727 EVX2Q03828 476 aa9□□□□□ -0.97
KNTC1-213ENST00000542727 PROM2Q8N271 834 aa8.97□□□□□ -0.97
KNTC1-213ENST00000542727 CREBZFQ9NS37 354 aa8.95□□□□□ -0.98
KNTC1-213ENST00000542727 CD44P16070 742 aaKnown RBP8.94□□□□□ -0.98
KNTC1-213ENST00000542727 CLCN6P51797 869 aa8.94□□□□□ -0.98
KNTC1-213ENST00000542727 GABBR2O75899 941 aa8.88□□□□□ -0.99
KNTC1-213ENST00000542727 NPM1P06748 294 aaKnown RBP eCLIP8.88□□□□□ -0.99
KNTC1-213ENST00000542727 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
KNTC1-213ENST00000542727 ZNF579Q8NAF0 562 aaKnown RBP8.83□□□□□ -1
KNTC1-213ENST00000542727 PLEKHG5O94827 1062 aa8.81□□□□□ -1
KNTC1-213ENST00000542727 ZRANB1Q9UGI0 708 aa8.81□□□□□ -1
KNTC1-213ENST00000542727 MNX1P50219 401 aaPredicted RBP8.8□□□□□ -1
KNTC1-213ENST00000542727 FKBP8Q14318 412 aa8.75□□□□□ -1.01
KNTC1-213ENST00000542727 MIER1Q8N108 512 aa8.72□□□□□ -1.01
KNTC1-213ENST00000542727 DCBLD2Q96PD2 775 aa8.71□□□□□ -1.02
KNTC1-213ENST00000542727 ZBTB47Q9UFB7 747 aaPredicted RBP8.71□□□□□ -1.02
KNTC1-213ENST00000542727 PLSCR2Q9NRY7 297 aa8.7□□□□□ -1.02
KNTC1-213ENST00000542727 PLCD3Q8N3E9 789 aa8.67□□□□□ -1.02
KNTC1-213ENST00000542727 FBXO3Q9UK99 471 aa8.66□□□□□ -1.02
KNTC1-213ENST00000542727 GALR2O43603 387 aaPredicted RBP8.65□□□□□ -1.02
KNTC1-213ENST00000542727 POTEIP0CG38 1075 aa8.65□□□□□ -1.02
KNTC1-213ENST00000542727 PHF12Q96QT6 1004 aa8.65□□□□□ -1.02
KNTC1-213ENST00000542727 LHX8Q68G74 356 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms