RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PDE4DIPQ5VU43 2346 aa0.75□□□□□ -2.29
HMGB1P22-201ENST00000505315 S4R3F8 94 aa0.74□□□□□ -2.29
HMGB1P22-201ENST00000505315 TFF3Q07654 80 aa0.73□□□□□ -2.29
HMGB1P22-201ENST00000505315 ABCA5Q8WWZ7 1642 aa0.73□□□□□ -2.29
HMGB1P22-201ENST00000505315 NOTCH1P46531 2555 aa0.73□□□□□ -2.29
HMGB1P22-201ENST00000505315 ANKRD36CQ5JPF3 1778 aa0.73□□□□□ -2.29
HMGB1P22-201ENST00000505315 FBN3Q75N90 2809 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 ZFYVE26Q68DK2 2539 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 SPTA1P02549 2419 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 WFDC10BQ8IUB3 73 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 KAAG1Q9UBP8 84 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 CDC42BPAQ5VT25 1732 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 TOGARAM1Q9Y4F4 1720 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 APCP25054 2843 aa0.71□□□□□ -2.3
HMGB1P22-201ENST00000505315 CRCT1Q9UGL9 99 aa0.71□□□□□ -2.3
HMGB1P22-201ENST00000505315 FBN2P35556 2912 aa0.71□□□□□ -2.3
HMGB1P22-201ENST00000505315 NRXN3Q9Y4C0 1643 aa0.71□□□□□ -2.3
HMGB1P22-201ENST00000505315 CSPG4Q6UVK1 2322 aa0.7□□□□□ -2.3
HMGB1P22-201ENST00000505315 KRTAP5-8O75690 187 aa0.7□□□□□ -2.3
HMGB1P22-201ENST00000505315 KRTAP21-2Q3LI59 83 aa0.7□□□□□ -2.3
HMGB1P22-201ENST00000505315 FRAS1Q86XX4 4008 aa0.7□□□□□ -2.3
HMGB1P22-201ENST00000505315 IGF2RP11717 2491 aa0.7□□□□□ -2.3
HMGB1P22-201ENST00000505315 LINC01546A6NGU7 62 aa0.69□□□□□ -2.3
HMGB1P22-201ENST00000505315 SMIM2Q9BVW6 85 aa0.69□□□□□ -2.3
HMGB1P22-201ENST00000505315 PTPN13Q12923 2485 aa0.69□□□□□ -2.3
HMGB1P22-201ENST00000505315 TENM4Q6N022 2769 aa0.68□□□□□ -2.3
HMGB1P22-201ENST00000505315 PRM1P04553 51 aa0.68□□□□□ -2.3
HMGB1P22-201ENST00000505315 IQGAP2Q13576 1575 aa0.68□□□□□ -2.3
HMGB1P22-201ENST00000505315 LMO7Q8WWI1 1683 aa0.68□□□□□ -2.3
HMGB1P22-201ENST00000505315 CHD6Q8TD26 2715 aa0.67□□□□□ -2.3
HMGB1P22-201ENST00000505315 ATRQ13535 2644 aa0.67□□□□□ -2.3
HMGB1P22-201ENST00000505315 KRTAP5-2Q701N4 177 aa0.67□□□□□ -2.3
HMGB1P22-201ENST00000505315 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
HMGB1P22-201ENST00000505315 NOP10Q9NPE3 64 aaKnown RBP0.66□□□□□ -2.3
HMGB1P22-201ENST00000505315 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.3
HMGB1P22-201ENST00000505315 NCOR1O75376 2440 aa0.65□□□□□ -2.31
HMGB1P22-201ENST00000505315 BPTFQ12830 3046 aa0.64□□□□□ -2.31
HMGB1P22-201ENST00000505315 CHD8Q9HCK8 2581 aa0.64□□□□□ -2.31
HMGB1P22-201ENST00000505315 REV3LO60673 3130 aa0.64□□□□□ -2.31
HMGB1P22-201ENST00000505315 UNC79Q9P2D8 2635 aa0.64□□□□□ -2.31
HMGB1P22-201ENST00000505315 A0A1B0GUL6 1792 aa0.63□□□□□ -2.31
HMGB1P22-201ENST00000505315 ANK2Q01484 3957 aa0.63□□□□□ -2.31
HMGB1P22-201ENST00000505315 EP300Q09472 2414 aaPredicted RBP0.63□□□□□ -2.31
HMGB1P22-201ENST00000505315 VWFP04275 2813 aa0.62□□□□□ -2.31
HMGB1P22-201ENST00000505315 H3BNG1 76 aa0.62□□□□□ -2.31
HMGB1P22-201ENST00000505315 TRANK1O15050 2925 aa0.61□□□□□ -2.31
HMGB1P22-201ENST00000505315 KRTAP4-1Q9BYQ7 146 aa0.61□□□□□ -2.31
HMGB1P22-201ENST00000505315 FAM208AQ9UK61 1670 aaKnown RBP0.61□□□□□ -2.31
HMGB1P22-201ENST00000505315 HECTD1Q9ULT8 2610 aa0.6□□□□□ -2.31
HMGB1P22-201ENST00000505315 IQGAP1P46940 1657 aa0.6□□□□□ -2.31
HMGB1P22-201ENST00000505315 DDX60Q8IY21 1712 aaKnown RBP0.6□□□□□ -2.31
HMGB1P22-201ENST00000505315 IGLV5-48A0A075B6I7 105 aa0.59□□□□□ -2.31
HMGB1P22-201ENST00000505315 NDUFA1O15239 70 aa0.59□□□□□ -2.31
HMGB1P22-201ENST00000505315 KIF21BO75037 1637 aa0.59□□□□□ -2.32
HMGB1P22-201ENST00000505315 PCNX1Q96RV3 2341 aa0.58□□□□□ -2.32
HMGB1P22-201ENST00000505315 CREBBPQ92793 2442 aa0.58□□□□□ -2.32
HMGB1P22-201ENST00000505315 DSPP15924 2871 aaKnown RBP0.57□□□□□ -2.32
HMGB1P22-201ENST00000505315 ALMS1Q8TCU4 4167 aa0.57□□□□□ -2.32
HMGB1P22-201ENST00000505315 OTOGQ6ZRI0 2925 aa0.57□□□□□ -2.32
HMGB1P22-201ENST00000505315 DEFB131AP59861 70 aa0.57□□□□□ -2.32
HMGB1P22-201ENST00000505315 NAV2Q8IVL1 2488 aa0.57□□□□□ -2.32
HMGB1P22-201ENST00000505315 NFAT5O94916 1531 aa0.56□□□□□ -2.32
HMGB1P22-201ENST00000505315 C9orf92A6NGG3 77 aa0.56□□□□□ -2.32
HMGB1P22-201ENST00000505315 M0QY20 66 aa0.56□□□□□ -2.32
HMGB1P22-201ENST00000505315 USP24Q9UPU5 2620 aa0.56□□□□□ -2.32
HMGB1P22-201ENST00000505315 TOP2AP11388 1531 aaKnown RBP0.55□□□□□ -2.32
HMGB1P22-201ENST00000505315 NCOR2Q9Y618 2525 aa0.55□□□□□ -2.32
HMGB1P22-201ENST00000505315 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
HMGB1P22-201ENST00000505315 TNXBP22105 4242 aa0.55□□□□□ -2.32
HMGB1P22-201ENST00000505315 AKAP13Q12802 2813 aa0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 PKD1L2Q7Z442 2459 aa0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 SPRR2DP22532 72 aa0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 SYNE1Q8NF91 8797 aaKnown RBP0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 HIVEP3Q5T1R4 2406 aa0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 MAP1BP46821 2468 aaKnown RBP0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 APC2O95996 2303 aa0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 MMP24-AS1A0A0U1RRL7 71 aa0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 UBR5O95071 2799 aaPredicted RBP0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 TRPM2O94759 1503 aa0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 WNK1Q9H4A3 2382 aa0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 CEP290O15078 2479 aa0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 FCGBPQ9Y6R7 5405 aaPredicted RBP0.51□□□□□ -2.33
HMGB1P22-201ENST00000505315 DEFB110Q30KQ9 67 aa0.5□□□□□ -2.33
HMGB1P22-201ENST00000505315 ACANP16112 2415 aa0.5□□□□□ -2.33
HMGB1P22-201ENST00000505315 NBASA2RRP1 2371 aa0.49□□□□□ -2.33
HMGB1P22-201ENST00000505315 ATP7AQ04656 1500 aa0.48□□□□□ -2.33
HMGB1P22-201ENST00000505315 PKD1L1Q8TDX9 2849 aa0.48□□□□□ -2.33
HMGB1P22-201ENST00000505315 A8MTW9 85 aa0.47□□□□□ -2.33
HMGB1P22-201ENST00000505315 SPRR2BP35325 72 aa0.47□□□□□ -2.33
HMGB1P22-201ENST00000505315 FAT2Q9NYQ8 4349 aa0.47□□□□□ -2.33
HMGB1P22-201ENST00000505315 CACNA1AO00555 2505 aa0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 CLTCL1P53675 1640 aa0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 SETXQ7Z333 2677 aaKnown RBP0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 BSNQ9UPA5 3926 aa0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 HUWE1Q7Z6Z7 4374 aaKnown RBP0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 SAMD9LQ8IVG5 1584 aa0.45□□□□□ -2.34
HMGB1P22-201ENST00000505315 IGSF10Q6WRI0 2623 aa0.45□□□□□ -2.34
HMGB1P22-201ENST00000505315 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
HMGB1P22-201ENST00000505315 TNP1P09430 55 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms