RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 TNXBP22105 4242 aa0.4□□□□□ -2.35
VPS26A-206ENST00000489794 PDE4DIPQ5VU43 2346 aa0.39□□□□□ -2.35
VPS26A-206ENST00000489794 HRNRQ86YZ3 2850 aaPredicted RBP0.39□□□□□ -2.35
VPS26A-206ENST00000489794 RYR2Q92736 4967 aa0.39□□□□□ -2.35
VPS26A-206ENST00000489794 ABCA13Q86UQ4 5058 aa0.39□□□□□ -2.35
VPS26A-206ENST00000489794 USP9XQ93008 2570 aaPredicted RBP0.39□□□□□ -2.35
VPS26A-206ENST00000489794 M0R2T5 61 aa0.39□□□□□ -2.35
VPS26A-206ENST00000489794 C3orf79P0CE67 100 aa0.39□□□□□ -2.35
VPS26A-206ENST00000489794 LRP1Q07954 4544 aaKnown RBP0.39□□□□□ -2.35
VPS26A-206ENST00000489794 NHSQ6T4R5 1651 aa0.39□□□□□ -2.35
VPS26A-206ENST00000489794 SETD2Q9BYW2 2564 aaPredicted RBP0.39□□□□□ -2.35
VPS26A-206ENST00000489794 KALRNO60229 2985 aa0.39□□□□□ -2.35
VPS26A-206ENST00000489794 HECTD1Q9ULT8 2610 aa0.38□□□□□ -2.35
VPS26A-206ENST00000489794 SSPOA2VEC9 5147 aa0.38□□□□□ -2.35
VPS26A-206ENST00000489794 EPG5Q9HCE0 2579 aa0.38□□□□□ -2.35
VPS26A-206ENST00000489794 WNK1Q9H4A3 2382 aa0.38□□□□□ -2.35
VPS26A-206ENST00000489794 UBL5Q9BZL1 73 aa0.38□□□□□ -2.35
VPS26A-206ENST00000489794 DMBT1Q9UGM3 2413 aaPredicted RBP0.38□□□□□ -2.35
VPS26A-206ENST00000489794 MACF1Q9UPN3 7388 aaKnown RBP0.38□□□□□ -2.35
VPS26A-206ENST00000489794 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
VPS26A-206ENST00000489794 PKD1L1Q8TDX9 2849 aa0.37□□□□□ -2.35
VPS26A-206ENST00000489794 NBEAL2Q6ZNJ1 2754 aa0.37□□□□□ -2.35
VPS26A-206ENST00000489794 ITPR3Q14573 2671 aa0.37□□□□□ -2.35
VPS26A-206ENST00000489794 MYO18BQ8IUG5 2567 aa0.37□□□□□ -2.35
VPS26A-206ENST00000489794 REV3LO60673 3130 aa0.37□□□□□ -2.35
VPS26A-206ENST00000489794 WDFY4Q6ZS81 3184 aa0.37□□□□□ -2.35
VPS26A-206ENST00000489794 EFCAB5A4FU69 1503 aa0.37□□□□□ -2.35
VPS26A-206ENST00000489794 LAMA2P24043 3122 aaKnown RBP0.37□□□□□ -2.35
VPS26A-206ENST00000489794 CFAP47Q6ZTR5 3102 aa0.37□□□□□ -2.35
VPS26A-206ENST00000489794 PDZD2O15018 2839 aa0.37□□□□□ -2.35
VPS26A-206ENST00000489794 KMT2DO14686 5537 aa0.36□□□□□ -2.35
VPS26A-206ENST00000489794 PLXNC1O60486 1568 aa0.36□□□□□ -2.35
VPS26A-206ENST00000489794 ZANQ9Y493 2812 aa0.36□□□□□ -2.35
VPS26A-206ENST00000489794 MRPL33O75394 65 aaKnown RBP0.36□□□□□ -2.35
VPS26A-206ENST00000489794 DEFB135Q30KP9 77 aa0.36□□□□□ -2.35
VPS26A-206ENST00000489794 KCNQ1DNQ9H478 68 aa0.36□□□□□ -2.35
VPS26A-206ENST00000489794 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
VPS26A-206ENST00000489794 CSMD1Q96PZ7 3565 aa0.36□□□□□ -2.35
VPS26A-206ENST00000489794 NEBP20929 6669 aa0.36□□□□□ -2.35
VPS26A-206ENST00000489794 SPEGQ15772 3267 aa0.35□□□□□ -2.35
VPS26A-206ENST00000489794 RNF17Q9BXT8 1623 aaKnown RBP0.35□□□□□ -2.35
VPS26A-206ENST00000489794 RNF213Q63HN8 5207 aa0.35□□□□□ -2.35
VPS26A-206ENST00000489794 BSNQ9UPA5 3926 aa0.35□□□□□ -2.35
VPS26A-206ENST00000489794 SPTBN5Q9NRC6 3674 aaKnown RBP0.35□□□□□ -2.35
VPS26A-206ENST00000489794 DEFB131BA0A096LNP1 70 aa0.35□□□□□ -2.35
VPS26A-206ENST00000489794 H0YAA0 97 aa0.35□□□□□ -2.35
VPS26A-206ENST00000489794 VCANP13611 3396 aa0.35□□□□□ -2.35
VPS26A-206ENST00000489794 DOPEY1Q5JWR5 2465 aa0.35□□□□□ -2.35
VPS26A-206ENST00000489794 SZT2Q5T011 3432 aa0.34□□□□□ -2.35
VPS26A-206ENST00000489794 HERC2O95714 4834 aa0.34□□□□□ -2.35
VPS26A-206ENST00000489794 APC2O95996 2303 aa0.34□□□□□ -2.36
VPS26A-206ENST00000489794 ITPR1Q14643 2758 aa0.34□□□□□ -2.36
VPS26A-206ENST00000489794 NBEAQ8NFP9 2946 aa0.34□□□□□ -2.36
VPS26A-206ENST00000489794 DEPDC5O75140 1603 aa0.34□□□□□ -2.36
VPS26A-206ENST00000489794 DNAH12Q6ZR08 3092 aa0.34□□□□□ -2.36
VPS26A-206ENST00000489794 KMT2AQ03164 3969 aa0.33□□□□□ -2.36
VPS26A-206ENST00000489794 MYO9AB2RTY4 2548 aa0.33□□□□□ -2.36
VPS26A-206ENST00000489794 FSIP2Q5CZC0 6907 aa0.33□□□□□ -2.36
VPS26A-206ENST00000489794 MKI67P46013 3256 aaKnown RBP0.33□□□□□ -2.36
VPS26A-206ENST00000489794 EP400Q96L91 3159 aa0.33□□□□□ -2.36
VPS26A-206ENST00000489794 MXRA5Q9NR99 2828 aa0.32□□□□□ -2.36
VPS26A-206ENST00000489794 THOC2Q8NI27 1593 aaKnown RBP0.32□□□□□ -2.36
VPS26A-206ENST00000489794 INO80Q9ULG1 1556 aaPredicted RBP0.32□□□□□ -2.36
VPS26A-206ENST00000489794 ANKHD1Q8IWZ3 2542 aaKnown RBP0.32□□□□□ -2.36
VPS26A-206ENST00000489794 HMCN2Q8NDA2 5059 aa0.32□□□□□ -2.36
VPS26A-206ENST00000489794 SPRR2DP22532 72 aa0.32□□□□□ -2.36
VPS26A-206ENST00000489794 UNC80Q8N2C7 3258 aa0.32□□□□□ -2.36
VPS26A-206ENST00000489794 CENPFP49454 3210 aa0.32□□□□□ -2.36
VPS26A-206ENST00000489794 USP34Q70CQ2 3546 aa0.31□□□□□ -2.36
VPS26A-206ENST00000489794 SMIM31A0A1B0GVY4 71 aa0.31□□□□□ -2.36
VPS26A-206ENST00000489794 CCDC180Q9P1Z9 1646 aa0.31□□□□□ -2.36
VPS26A-206ENST00000489794 PRRC2CQ9Y520 2896 aaKnown RBP0.31□□□□□ -2.36
VPS26A-206ENST00000489794 BRCA2P51587 3418 aa0.31□□□□□ -2.36
VPS26A-206ENST00000489794 RANBP2P49792 3224 aaKnown RBP0.3□□□□□ -2.36
VPS26A-206ENST00000489794 ANKRD11Q6UB99 2663 aaPredicted RBP0.3□□□□□ -2.36
VPS26A-206ENST00000489794 GCN1Q92616 2671 aaKnown RBP0.3□□□□□ -2.36
VPS26A-206ENST00000489794 TENM2Q9NT68 2774 aa0.3□□□□□ -2.36
VPS26A-206ENST00000489794 FASNP49327 2511 aaKnown RBP0.3□□□□□ -2.36
VPS26A-206ENST00000489794 HTTP42858 3142 aa0.3□□□□□ -2.36
VPS26A-206ENST00000489794 FLNBO75369 2602 aaKnown RBP0.3□□□□□ -2.36
VPS26A-206ENST00000489794 DSTQ03001 7570 aaKnown RBP0.29□□□□□ -2.36
VPS26A-206ENST00000489794 COL12A1Q99715 3063 aa0.29□□□□□ -2.36
VPS26A-206ENST00000489794 A0A087WWC5 75 aa0.29□□□□□ -2.36
VPS26A-206ENST00000489794 ETDCA0A1B0GVM5 59 aa0.29□□□□□ -2.36
VPS26A-206ENST00000489794 CRIP1P50238 77 aa0.29□□□□□ -2.36
VPS26A-206ENST00000489794 FAT3Q8TDW7 4589 aa0.29□□□□□ -2.36
VPS26A-206ENST00000489794 UTP20O75691 2785 aaKnown RBP0.29□□□□□ -2.36
VPS26A-206ENST00000489794 SPG11Q96JI7 2443 aa0.29□□□□□ -2.36
VPS26A-206ENST00000489794 MUC12Q9UKN1 5478 aa0.29□□□□□ -2.36
VPS26A-206ENST00000489794 SPTBN4Q9H254 2564 aa0.29□□□□□ -2.36
VPS26A-206ENST00000489794 NSD1Q96L73 2696 aaPredicted RBP0.29□□□□□ -2.36
VPS26A-206ENST00000489794 CFAP46Q8IYW2 2715 aa0.29□□□□□ -2.36
VPS26A-206ENST00000489794 NIPBLQ6KC79 2804 aaeCLIP0.28□□□□□ -2.36
VPS26A-206ENST00000489794 DSPP15924 2871 aaKnown RBP0.28□□□□□ -2.36
VPS26A-206ENST00000489794 LAMA3Q16787 3333 aa0.28□□□□□ -2.36
VPS26A-206ENST00000489794 NBPF19A0A087WUL8 3843 aa0.28□□□□□ -2.36
VPS26A-206ENST00000489794 DCHS1Q96JQ0 3298 aa0.28□□□□□ -2.36
VPS26A-206ENST00000489794 KRTAP20-1Q3LI63 56 aa0.28□□□□□ -2.36
VPS26A-206ENST00000489794 S100ZQ8WXG8 99 aa0.28□□□□□ -2.36
VPS26A-206ENST00000489794 MUC3AQ02505 3323 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms