RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 KRTAP21-3Q3LHN1 58 aa4.59□□□□□ -1.68
PBX1-204ENST00000465089 DEFB1P60022 68 aa4.55□□□□□ -1.68
PBX1-204ENST00000465089 COL6A5A8TX70 2615 aa4.54□□□□□ -1.68
PBX1-204ENST00000465089 TEP1Q99973 2627 aaKnown RBP4.53□□□□□ -1.68
PBX1-204ENST00000465089 NOTCH1P46531 2555 aa4.53□□□□□ -1.68
PBX1-204ENST00000465089 A0A0D9SG42 100 aa4.53□□□□□ -1.68
PBX1-204ENST00000465089 HELZ2Q9BYK8 2649 aaKnown RBP4.53□□□□□ -1.68
PBX1-204ENST00000465089 BPTFQ12830 3046 aa4.51□□□□□ -1.69
PBX1-204ENST00000465089 CASC10Q5T4H9 136 aa4.51□□□□□ -1.69
PBX1-204ENST00000465089 C10orf99Q6UWK7 81 aa4.51□□□□□ -1.69
PBX1-204ENST00000465089 UNC79Q9P2D8 2635 aa4.51□□□□□ -1.69
PBX1-204ENST00000465089 MAP1AP78559 2803 aaPredicted RBP4.5□□□□□ -1.69
PBX1-204ENST00000465089 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
PBX1-204ENST00000465089 ATRQ13535 2644 aa4.49□□□□□ -1.69
PBX1-204ENST00000465089 P0C880 135 aa4.49□□□□□ -1.69
PBX1-204ENST00000465089 Q5W150 140 aa4.49□□□□□ -1.69
PBX1-204ENST00000465089 NSD1Q96L73 2696 aaPredicted RBP4.48□□□□□ -1.69
PBX1-204ENST00000465089 LCE6AA0A183 80 aa4.48□□□□□ -1.69
PBX1-204ENST00000465089 GCN1Q92616 2671 aaKnown RBP4.48□□□□□ -1.69
PBX1-204ENST00000465089 GAS8-AS1O95177 125 aa4.48□□□□□ -1.69
PBX1-204ENST00000465089 A8MUU9 505 aa4.47□□□□□ -1.69
PBX1-204ENST00000465089 ITPR3Q14573 2671 aa4.46□□□□□ -1.7
PBX1-204ENST00000465089 GIG44P09565 113 aaPredicted RBP4.46□□□□□ -1.7
PBX1-204ENST00000465089 STAB2Q8WWQ8 2551 aa4.46□□□□□ -1.7
PBX1-204ENST00000465089 A0A0G2JQZ4 141 aa4.45□□□□□ -1.7
PBX1-204ENST00000465089 KRTAP24-1Q3LI83 254 aa4.45□□□□□ -1.7
PBX1-204ENST00000465089 Q8N1X5 172 aa4.45□□□□□ -1.7
PBX1-204ENST00000465089 CHD6Q8TD26 2715 aa4.44□□□□□ -1.7
PBX1-204ENST00000465089 K7EIL1 84 aa4.44□□□□□ -1.7
PBX1-204ENST00000465089 A0A096LNT2 108 aa4.43□□□□□ -1.7
PBX1-204ENST00000465089 A8MU10 97 aa4.42□□□□□ -1.7
PBX1-204ENST00000465089 ITPR2Q14571 2701 aa4.41□□□□□ -1.7
PBX1-204ENST00000465089 A6NN06 94 aa4.41□□□□□ -1.7
PBX1-204ENST00000465089 C20orf166-AS1Q96NR2 134 aa4.4□□□□□ -1.71
PBX1-204ENST00000465089 FLNBO75369 2602 aaKnown RBP4.39□□□□□ -1.71
PBX1-204ENST00000465089 CYSTM1Q9H1C7 97 aa4.37□□□□□ -1.71
PBX1-204ENST00000465089 AKAP13Q12802 2813 aa4.36□□□□□ -1.71
PBX1-204ENST00000465089 Q5VSD8 79 aa4.35□□□□□ -1.71
PBX1-204ENST00000465089 Q8NDZ9 215 aa4.33□□□□□ -1.72
PBX1-204ENST00000465089 TPRXLQ17RH7 258 aa4.33□□□□□ -1.72
PBX1-204ENST00000465089 INE1O15225 51 aa4.33□□□□□ -1.72
PBX1-204ENST00000465089 Q6ZRN7 208 aaPredicted RBP4.32□□□□□ -1.72
PBX1-204ENST00000465089 SETXQ7Z333 2677 aaKnown RBP4.31□□□□□ -1.72
PBX1-204ENST00000465089 BAHCC1Q9P281 2608 aa4.3□□□□□ -1.72
PBX1-204ENST00000465089 IGSF10Q6WRI0 2623 aa4.3□□□□□ -1.72
PBX1-204ENST00000465089 KRTAP29-1A8MX34 341 aaPredicted RBP4.29□□□□□ -1.72
PBX1-204ENST00000465089 H0YAA0 97 aa4.28□□□□□ -1.72
PBX1-204ENST00000465089 KRTAP26-1Q6PEX3 210 aa4.28□□□□□ -1.72
PBX1-204ENST00000465089 KRTAP4-16G5E9R7 235 aaPredicted RBP4.27□□□□□ -1.73
PBX1-204ENST00000465089 SMR3AQ99954 134 aa4.26□□□□□ -1.73
PBX1-204ENST00000465089 TEX15Q9BXT5 2789 aa4.25□□□□□ -1.73
PBX1-204ENST00000465089 KRTAP10-11P60412 298 aa4.25□□□□□ -1.73
PBX1-204ENST00000465089 KRTAP11-1Q8IUC1 163 aa4.2□□□□□ -1.74
PBX1-204ENST00000465089 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
PBX1-204ENST00000465089 ZNF292O60281 2723 aa4.17□□□□□ -1.74
PBX1-204ENST00000465089 KRTAP10-9P60411 292 aa4.16□□□□□ -1.74
PBX1-204ENST00000465089 APCP25054 2843 aa4.16□□□□□ -1.74
PBX1-204ENST00000465089 C10orf95Q9H7T3 257 aa4.15□□□□□ -1.75
PBX1-204ENST00000465089 SMR3BP02814 79 aaPredicted RBP4.14□□□□□ -1.75
PBX1-204ENST00000465089 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
PBX1-204ENST00000465089 EP400Q96L91 3159 aa4.11□□□□□ -1.75
PBX1-204ENST00000465089 UBR5O95071 2799 aaPredicted RBP4.11□□□□□ -1.75
PBX1-204ENST00000465089 CENPFP49454 3210 aa4.1□□□□□ -1.75
PBX1-204ENST00000465089 TENM3Q9P273 2699 aa4.06□□□□□ -1.76
PBX1-204ENST00000465089 NIPBLQ6KC79 2804 aaeCLIP4.04□□□□□ -1.76
PBX1-204ENST00000465089 KRTAP13-1Q8IUC0 172 aa4.04□□□□□ -1.76
PBX1-204ENST00000465089 UTP20O75691 2785 aaKnown RBP4.04□□□□□ -1.76
PBX1-204ENST00000465089 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
PBX1-204ENST00000465089 MT3P25713 68 aa3.99□□□□□ -1.77
PBX1-204ENST00000465089 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
PBX1-204ENST00000465089 KRTAP1-1Q07627 177 aa3.98□□□□□ -1.77
PBX1-204ENST00000465089 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
PBX1-204ENST00000465089 KRTAP1-3Q8IUG1 177 aa3.95□□□□□ -1.78
PBX1-204ENST00000465089 KALRNO60229 2985 aa3.93□□□□□ -1.78
PBX1-204ENST00000465089 NBEAL2Q6ZNJ1 2754 aa3.92□□□□□ -1.78
PBX1-204ENST00000465089 KRTAP13-2Q52LG2 175 aa3.92□□□□□ -1.78
PBX1-204ENST00000465089 KRTAP10-3P60369 221 aa3.89□□□□□ -1.79
PBX1-204ENST00000465089 XP32Q5T750 250 aa3.88□□□□□ -1.79
PBX1-204ENST00000465089 PCNTO95613 3336 aa3.85□□□□□ -1.79
PBX1-204ENST00000465089 SRCAPQ6ZRS2 3230 aa3.84□□□□□ -1.79
PBX1-204ENST00000465089 KRTAP10-1P60331 282 aa3.83□□□□□ -1.8
PBX1-204ENST00000465089 ITPR1Q14643 2758 aa3.83□□□□□ -1.8
PBX1-204ENST00000465089 TENM1Q9UKZ4 2725 aa3.82□□□□□ -1.8
PBX1-204ENST00000465089 KRTAP1-5Q9BYS1 174 aa3.81□□□□□ -1.8
PBX1-204ENST00000465089 FLNCQ14315 2725 aa3.8□□□□□ -1.8
PBX1-204ENST00000465089 FRYLO94915 3013 aa3.79□□□□□ -1.8
PBX1-204ENST00000465089 TGP01266 2768 aa3.79□□□□□ -1.8
PBX1-204ENST00000465089 CHD9Q3L8U1 2897 aa3.78□□□□□ -1.8
PBX1-204ENST00000465089 KRTAP10-2P60368 255 aa3.78□□□□□ -1.8
PBX1-204ENST00000465089 TRANK1O15050 2925 aa3.78□□□□□ -1.8
PBX1-204ENST00000465089 HIVEP1P15822 2718 aa3.77□□□□□ -1.81
PBX1-204ENST00000465089 KRTAP13-3Q3SY46 172 aa3.76□□□□□ -1.81
PBX1-204ENST00000465089 NF1P21359 2839 aa3.75□□□□□ -1.81
PBX1-204ENST00000465089 KRTAP10-10P60014 251 aa3.73□□□□□ -1.81
PBX1-204ENST00000465089 KRTAP1-4P0C5Y4 121 aa3.67□□□□□ -1.82
PBX1-204ENST00000465089 DSPP15924 2871 aaKnown RBP3.67□□□□□ -1.82
PBX1-204ENST00000465089 A0A0C4DFX4 3053 aa3.64□□□□□ -1.83
PBX1-204ENST00000465089 USP34Q70CQ2 3546 aa3.63□□□□□ -1.83
PBX1-204ENST00000465089 PDZD2O15018 2839 aa3.63□□□□□ -1.83
PBX1-204ENST00000465089 KRTAP12-2P59991 146 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms