RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
PBX1-204ENST00000465089 MYT1Q01538 1121 aa12.21□□□□□ -0.45
PBX1-204ENST00000465089 YTHDC1Q96MU7 727 aaKnown RBP12.11□□□□□ -0.47
PBX1-204ENST00000465089 FAM9AQ8IZU1 332 aaPredicted RBP11.98□□□□□ -0.49
PBX1-204ENST00000465089 CCER1Q8TC90 406 aaPredicted RBP11.93□□□□□ -0.5
PBX1-204ENST00000465089 TTBK1Q5TCY1 1321 aaPredicted RBP11.24□□□□□ -0.61
PBX1-204ENST00000465089 CLSPNQ9HAW4 1339 aa11.21□□□□□ -0.61
PBX1-204ENST00000465089 APLP2Q06481 763 aa11.14□□□□□ -0.63
PBX1-204ENST00000465089 ZEB1P37275 1124 aaPredicted RBP11.12□□□□□ -0.63
PBX1-204ENST00000465089 NISCHQ9Y2I1 1504 aa11.07□□□□□ -0.64
PBX1-204ENST00000465089 ERICH6Q7L0X2 663 aa11.07□□□□□ -0.64
PBX1-204ENST00000465089 CENPBP07199 599 aaPredicted RBP11.06□□□□□ -0.64
PBX1-204ENST00000465089 NEFMP07197 916 aa11.03□□□□□ -0.64
PBX1-204ENST00000465089 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
PBX1-204ENST00000465089 NEFLP07196 543 aa10.84□□□□□ -0.67
PBX1-204ENST00000465089 MYT1LQ9UL68 1186 aa10.79□□□□□ -0.68
PBX1-204ENST00000465089 ACIN1Q9UKV3 1341 aaKnown RBP10.77□□□□□ -0.69
PBX1-204ENST00000465089 GLIPR1L2Q4G1C9 344 aa10.73□□□□□ -0.69
PBX1-204ENST00000465089 EIF5BO60841 1220 aaKnown RBP10.71□□□□□ -0.69
PBX1-204ENST00000465089 EHMT2Q96KQ7 1210 aa10.68□□□□□ -0.7
PBX1-204ENST00000465089 ANO8Q9HCE9 1232 aaPredicted RBP10.6□□□□□ -0.71
PBX1-204ENST00000465089 ARID4BQ4LE39 1312 aaPredicted RBP10.6□□□□□ -0.71
PBX1-204ENST00000465089 RANGAP1P46060 587 aaPredicted RBP10.57□□□□□ -0.72
PBX1-204ENST00000465089 HMGB3O15347 200 aaKnown RBP10.49□□□□□ -0.73
PBX1-204ENST00000465089 ANP32BQ92688 251 aaKnown RBP10.49□□□□□ -0.73
PBX1-204ENST00000465089 RTL5Q5HYW3 569 aaPredicted RBP10.45□□□□□ -0.74
PBX1-204ENST00000465089 SLC24A1O60721 1099 aa10.42□□□□□ -0.74
PBX1-204ENST00000465089 ANP32EQ9BTT0 268 aa10.41□□□□□ -0.74
PBX1-204ENST00000465089 ZNF316A6NFI3 1004 aaPredicted RBP10.39□□□□□ -0.75
PBX1-204ENST00000465089 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
PBX1-204ENST00000465089 SUPT5HO00267 1087 aaKnown RBP10.35□□□□□ -0.75
PBX1-204ENST00000465089 DCAF8L2P0C7V8 631 aa10.34□□□□□ -0.75
PBX1-204ENST00000465089 USP35Q9P2H5 1018 aa10.33□□□□□ -0.76
PBX1-204ENST00000465089 CSRNP3Q8WYN3 585 aa10.31□□□□□ -0.76
PBX1-204ENST00000465089 TRIM44Q96DX7 344 aaPredicted RBP10.29□□□□□ -0.76
PBX1-204ENST00000465089 CDK11BP21127 795 aaKnown RBP10.29□□□□□ -0.76
PBX1-204ENST00000465089 CDK11AQ9UQ88 783 aaPredicted RBP10.29□□□□□ -0.76
PBX1-204ENST00000465089 NCLP19338 710 aaKnown RBP10.29□□□□□ -0.76
PBX1-204ENST00000465089 SHROOM4Q9ULL8 1493 aa10.25□□□□□ -0.77
PBX1-204ENST00000465089 L1TD1Q5T7N2 865 aaKnown RBP10.23□□□□□ -0.77
PBX1-204ENST00000465089 POLR3GLQ9BT43 218 aa10.23□□□□□ -0.77
PBX1-204ENST00000465089 HMGB1P09429 215 aaKnown RBP10.22□□□□□ -0.77
PBX1-204ENST00000465089 A0A0U1RQG5 324 aaPredicted RBP10.2□□□□□ -0.78
PBX1-204ENST00000465089 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
PBX1-204ENST00000465089 SCAF1Q9H7N4 1312 aaKnown RBP10.18□□□□□ -0.78
PBX1-204ENST00000465089 NEUROD1Q13562 356 aa10.18□□□□□ -0.78
PBX1-204ENST00000465089 HAP1P54257 671 aaPredicted RBP10.17□□□□□ -0.78
PBX1-204ENST00000465089 TNNT2P45379 298 aaPredicted RBP10.17□□□□□ -0.78
PBX1-204ENST00000465089 UPF2Q9HAU5 1272 aaKnown RBP10.17□□□□□ -0.78
PBX1-204ENST00000465089 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
PBX1-204ENST00000465089 HMGB1P1B2RPK0 211 aaPredicted RBP10.12□□□□□ -0.79
PBX1-204ENST00000465089 GTF3C3Q9Y5Q9 886 aa10.12□□□□□ -0.79
PBX1-204ENST00000465089 CHMP4BQ9H444 224 aaKnown RBP10.08□□□□□ -0.8
PBX1-204ENST00000465089 NRDCO43847 1150 aa10.06□□□□□ -0.8
PBX1-204ENST00000465089 ERICH6BQ5W0A0 696 aa10.05□□□□□ -0.8
PBX1-204ENST00000465089 AEBP2Q6ZN18 517 aaPredicted RBP10.04□□□□□ -0.8
PBX1-204ENST00000465089 GOLGA6L6A8MZA4 724 aa10.02□□□□□ -0.81
PBX1-204ENST00000465089 CHMP4AQ9BY43 222 aa9.99□□□□□ -0.81
PBX1-204ENST00000465089 CCDC180Q9P1Z9 1646 aa9.98□□□□□ -0.81
PBX1-204ENST00000465089 CNGB1Q14028 1251 aaPredicted RBP9.97□□□□□ -0.81
PBX1-204ENST00000465089 PKNOX2Q96KN3 472 aa9.97□□□□□ -0.81
PBX1-204ENST00000465089 ANP32AP39687 249 aaKnown RBP9.94□□□□□ -0.82
PBX1-204ENST00000465089 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
PBX1-204ENST00000465089 PTMSP20962 102 aa9.93□□□□□ -0.82
PBX1-204ENST00000465089 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.89□□□□□ -0.83
PBX1-204ENST00000465089 GOLGA6L22H0YM25 854 aa9.89□□□□□ -0.83
PBX1-204ENST00000465089 LAS1LQ9Y4W2 734 aaKnown RBP9.88□□□□□ -0.83
PBX1-204ENST00000465089 EIF3DO15371 548 aaKnown RBP eCLIP9.88□□□□□ -0.83
PBX1-204ENST00000465089 E9PSI1 815 aa9.87□□□□□ -0.83
PBX1-204ENST00000465089 ZRSR1Q15695 479 aaKnown RBP9.87□□□□□ -0.83
PBX1-204ENST00000465089 ATP1B4Q9UN42 357 aaPredicted RBP9.87□□□□□ -0.83
PBX1-204ENST00000465089 CCDC34Q96HJ3 373 aa9.86□□□□□ -0.83
PBX1-204ENST00000465089 HMGB2P26583 209 aaKnown RBP9.86□□□□□ -0.83
PBX1-204ENST00000465089 CALRP27797 417 aaKnown RBP9.86□□□□□ -0.83
PBX1-204ENST00000465089 EIF4G2P78344 907 aaKnown RBP eCLIP9.85□□□□□ -0.83
PBX1-204ENST00000465089 BCANQ96GW7 911 aa9.85□□□□□ -0.83
PBX1-204ENST00000465089 WWC1Q8IX03 1113 aa9.84□□□□□ -0.83
PBX1-204ENST00000465089 CHMP4CQ96CF2 233 aa9.83□□□□□ -0.84
PBX1-204ENST00000465089 HSP90AA1P07900 732 aaKnown RBP9.83□□□□□ -0.84
PBX1-204ENST00000465089 CHAF1AQ13111 956 aaPredicted RBP9.82□□□□□ -0.84
PBX1-204ENST00000465089 TRIM41Q8WV44 630 aa9.81□□□□□ -0.84
PBX1-204ENST00000465089 CASC1Q6TDU7 716 aa9.79□□□□□ -0.84
PBX1-204ENST00000465089 MYH16Q9H6N6 1097 aa9.77□□□□□ -0.85
PBX1-204ENST00000465089 HRCP23327 699 aa9.75□□□□□ -0.85
PBX1-204ENST00000465089 CEP162Q5TB80 1403 aa9.75□□□□□ -0.85
PBX1-204ENST00000465089 GOLGA6L1Q8N7Z2 621 aa9.75□□□□□ -0.85
PBX1-204ENST00000465089 BECN1Q14457 450 aa9.74□□□□□ -0.85
PBX1-204ENST00000465089 PNNQ9H307 717 aaKnown RBP9.74□□□□□ -0.85
PBX1-204ENST00000465089 HDAC5Q9UQL6 1122 aa9.73□□□□□ -0.85
PBX1-204ENST00000465089 NPM2Q86SE8 214 aaKnown RBP9.73□□□□□ -0.85
PBX1-204ENST00000465089 MS4A1P11836 297 aa9.72□□□□□ -0.85
PBX1-204ENST00000465089 ZNF326Q5BKZ1 582 aaKnown RBP9.7□□□□□ -0.86
PBX1-204ENST00000465089 GOLGA6L4A6NEF3 574 aa9.69□□□□□ -0.86
PBX1-204ENST00000465089 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
PBX1-204ENST00000465089 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
PBX1-204ENST00000465089 KIAA2012Q0VF49 1180 aa9.68□□□□□ -0.86
PBX1-204ENST00000465089 CANXP27824 592 aaKnown RBP9.68□□□□□ -0.86
PBX1-204ENST00000465089 CAGE1Q8TC20 777 aa9.68□□□□□ -0.86
PBX1-204ENST00000465089 CDCA8Q53HL2 280 aa9.68□□□□□ -0.86
PBX1-204ENST00000465089 HTATSF1O43719 755 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms