RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
RNU6-220P-201ENST00000390919 KRTAP2-1Q9BYU5 128 aa0.55□□□□□ -2.32
RNU6-220P-201ENST00000390919 ABRACLQ9P1F3 81 aa0.55□□□□□ -2.32
RNU6-220P-201ENST00000390919 NOTCH1P46531 2555 aa0.55□□□□□ -2.32
RNU6-220P-201ENST00000390919 ABCA5Q8WWZ7 1642 aa0.55□□□□□ -2.32
RNU6-220P-201ENST00000390919 TOGARAM1Q9Y4F4 1720 aa0.55□□□□□ -2.32
RNU6-220P-201ENST00000390919 VWFP04275 2813 aa0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 NRXN3Q9Y4C0 1643 aa0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 IGF2RP11717 2491 aa0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 H3BUA1 57 aa0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 M0R2T5 61 aa0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 WT1-ASQ06250 92 aa0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 TIMM8BQ9Y5J9 83 aaPredicted RBP0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 CDC42BPAQ5VT25 1732 aa0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 CSPG4Q6UVK1 2322 aa0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 AHNAK2Q8IVF2 5795 aa0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 SPTA1P02549 2419 aa0.54□□□□□ -2.32
RNU6-220P-201ENST00000390919 TRANK1O15050 2925 aa0.53□□□□□ -2.32
RNU6-220P-201ENST00000390919 ABCA2Q9BZC7 2435 aa0.53□□□□□ -2.32
RNU6-220P-201ENST00000390919 SMIM27A0A1W2PRY6 76 aa0.53□□□□□ -2.32
RNU6-220P-201ENST00000390919 RPS27P42677 84 aaKnown RBP0.53□□□□□ -2.32
RNU6-220P-201ENST00000390919 RPS27LQ71UM5 84 aaKnown RBP0.53□□□□□ -2.32
RNU6-220P-201ENST00000390919 ATRQ13535 2644 aa0.53□□□□□ -2.32
RNU6-220P-201ENST00000390919 A0A1B0GUL6 1792 aa0.52□□□□□ -2.33
RNU6-220P-201ENST00000390919 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
RNU6-220P-201ENST00000390919 REV3LO60673 3130 aa0.52□□□□□ -2.33
RNU6-220P-201ENST00000390919 CHD6Q8TD26 2715 aa0.52□□□□□ -2.33
RNU6-220P-201ENST00000390919 NCOR1O75376 2440 aa0.52□□□□□ -2.33
RNU6-220P-201ENST00000390919 UNC79Q9P2D8 2635 aa0.51□□□□□ -2.33
RNU6-220P-201ENST00000390919 ZFYVE26Q68DK2 2539 aa0.51□□□□□ -2.33
RNU6-220P-201ENST00000390919 MUC19Q7Z5P9 8384 aa0.51□□□□□ -2.33
RNU6-220P-201ENST00000390919 DEFB106AQ8N104 65 aa0.51□□□□□ -2.33
RNU6-220P-201ENST00000390919 OTOGQ6ZRI0 2925 aa0.51□□□□□ -2.33
RNU6-220P-201ENST00000390919 IQGAP2Q13576 1575 aa0.5□□□□□ -2.33
RNU6-220P-201ENST00000390919 LINC01546A6NGU7 62 aa0.5□□□□□ -2.33
RNU6-220P-201ENST00000390919 PRLHP81277 87 aa0.5□□□□□ -2.33
RNU6-220P-201ENST00000390919 CRCT1Q9UGL9 99 aa0.5□□□□□ -2.33
RNU6-220P-201ENST00000390919 DSPP15924 2871 aaKnown RBP0.49□□□□□ -2.33
RNU6-220P-201ENST00000390919 KRTAP21-2Q3LI59 83 aa0.49□□□□□ -2.33
RNU6-220P-201ENST00000390919 S4R3F8 94 aa0.49□□□□□ -2.33
RNU6-220P-201ENST00000390919 DDX60Q8IY21 1712 aaKnown RBP0.49□□□□□ -2.33
RNU6-220P-201ENST00000390919 PTPN13Q12923 2485 aa0.48□□□□□ -2.33
RNU6-220P-201ENST00000390919 FRAS1Q86XX4 4008 aa0.48□□□□□ -2.33
RNU6-220P-201ENST00000390919 CHD8Q9HCK8 2581 aa0.48□□□□□ -2.33
RNU6-220P-201ENST00000390919 LMO7Q8WWI1 1683 aa0.48□□□□□ -2.33
RNU6-220P-201ENST00000390919 ZNF469Q96JG9 3925 aaPredicted RBP0.47□□□□□ -2.33
RNU6-220P-201ENST00000390919 WFDC10BQ8IUB3 73 aa0.47□□□□□ -2.33
RNU6-220P-201ENST00000390919 SMIM2Q9BVW6 85 aa0.47□□□□□ -2.33
RNU6-220P-201ENST00000390919 NOP10Q9NPE3 64 aaKnown RBP0.47□□□□□ -2.33
RNU6-220P-201ENST00000390919 PKD1L1Q8TDX9 2849 aa0.47□□□□□ -2.33
RNU6-220P-201ENST00000390919 CSMD3Q7Z407 3707 aa0.47□□□□□ -2.33
RNU6-220P-201ENST00000390919 TFF3Q07654 80 aa0.46□□□□□ -2.34
RNU6-220P-201ENST00000390919 KAAG1Q9UBP8 84 aa0.46□□□□□ -2.34
RNU6-220P-201ENST00000390919 NAV2Q8IVL1 2488 aa0.46□□□□□ -2.34
RNU6-220P-201ENST00000390919 FSIP2Q5CZC0 6907 aa0.46□□□□□ -2.34
RNU6-220P-201ENST00000390919 USP24Q9UPU5 2620 aa0.46□□□□□ -2.34
RNU6-220P-201ENST00000390919 SYNE2Q8WXH0 6885 aaKnown RBP0.46□□□□□ -2.34
RNU6-220P-201ENST00000390919 FAM208AQ9UK61 1670 aaKnown RBP0.44□□□□□ -2.34
RNU6-220P-201ENST00000390919 PRM1P04553 51 aa0.44□□□□□ -2.34
RNU6-220P-201ENST00000390919 AKAP13Q12802 2813 aa0.44□□□□□ -2.34
RNU6-220P-201ENST00000390919 EP300Q09472 2414 aaPredicted RBP0.44□□□□□ -2.34
RNU6-220P-201ENST00000390919 IQGAP1P46940 1657 aa0.43□□□□□ -2.34
RNU6-220P-201ENST00000390919 PCNX1Q96RV3 2341 aa0.43□□□□□ -2.34
RNU6-220P-201ENST00000390919 ALMS1Q8TCU4 4167 aa0.43□□□□□ -2.34
RNU6-220P-201ENST00000390919 ANK2Q01484 3957 aa0.43□□□□□ -2.34
RNU6-220P-201ENST00000390919 HECTD1Q9ULT8 2610 aa0.43□□□□□ -2.34
RNU6-220P-201ENST00000390919 KIF21BO75037 1637 aa0.42□□□□□ -2.34
RNU6-220P-201ENST00000390919 PRRC2CQ9Y520 2896 aaKnown RBP0.42□□□□□ -2.34
RNU6-220P-201ENST00000390919 NCOR2Q9Y618 2525 aa0.41□□□□□ -2.34
RNU6-220P-201ENST00000390919 IGLV5-48A0A075B6I7 105 aa0.41□□□□□ -2.34
RNU6-220P-201ENST00000390919 C9orf92A6NGG3 77 aa0.41□□□□□ -2.34
RNU6-220P-201ENST00000390919 KRTAP4-1Q9BYQ7 146 aa0.41□□□□□ -2.34
RNU6-220P-201ENST00000390919 UBR5O95071 2799 aaPredicted RBP0.41□□□□□ -2.34
RNU6-220P-201ENST00000390919 WNK1Q9H4A3 2382 aa0.41□□□□□ -2.34
RNU6-220P-201ENST00000390919 SETXQ7Z333 2677 aaKnown RBP0.41□□□□□ -2.34
RNU6-220P-201ENST00000390919 APC2O95996 2303 aa0.4□□□□□ -2.35
RNU6-220P-201ENST00000390919 NDUFA1O15239 70 aa0.4□□□□□ -2.35
RNU6-220P-201ENST00000390919 DEFB131AP59861 70 aa0.4□□□□□ -2.35
RNU6-220P-201ENST00000390919 IGSF10Q6WRI0 2623 aa0.4□□□□□ -2.35
RNU6-220P-201ENST00000390919 CEP290O15078 2479 aa0.4□□□□□ -2.35
RNU6-220P-201ENST00000390919 CREBBPQ92793 2442 aa0.39□□□□□ -2.35
RNU6-220P-201ENST00000390919 MAP1BP46821 2468 aaKnown RBP0.39□□□□□ -2.35
RNU6-220P-201ENST00000390919 H3BNG1 76 aa0.39□□□□□ -2.35
RNU6-220P-201ENST00000390919 KRTAP21-1Q3LI58 79 aa0.39□□□□□ -2.35
RNU6-220P-201ENST00000390919 NBASA2RRP1 2371 aa0.39□□□□□ -2.35
RNU6-220P-201ENST00000390919 PKD1L2Q7Z442 2459 aa0.39□□□□□ -2.35
RNU6-220P-201ENST00000390919 TNRC18O15417 2968 aaPredicted RBP0.39□□□□□ -2.35
RNU6-220P-201ENST00000390919 HIVEP3Q5T1R4 2406 aa0.38□□□□□ -2.35
RNU6-220P-201ENST00000390919 M0QY20 66 aa0.38□□□□□ -2.35
RNU6-220P-201ENST00000390919 SPRR2DP22532 72 aa0.38□□□□□ -2.35
RNU6-220P-201ENST00000390919 CELSR1Q9NYQ6 3014 aa0.38□□□□□ -2.35
RNU6-220P-201ENST00000390919 ACANP16112 2415 aa0.38□□□□□ -2.35
RNU6-220P-201ENST00000390919 TRPM2O94759 1503 aa0.38□□□□□ -2.35
RNU6-220P-201ENST00000390919 MMP24-AS1A0A0U1RRL7 71 aa0.37□□□□□ -2.35
RNU6-220P-201ENST00000390919 CLTCL1P53675 1640 aa0.37□□□□□ -2.35
RNU6-220P-201ENST00000390919 NFAT5O94916 1531 aa0.37□□□□□ -2.35
RNU6-220P-201ENST00000390919 FCGBPQ9Y6R7 5405 aaPredicted RBP0.37□□□□□ -2.35
RNU6-220P-201ENST00000390919 A8MTW9 85 aa0.36□□□□□ -2.35
RNU6-220P-201ENST00000390919 TOP2AP11388 1531 aaKnown RBP0.36□□□□□ -2.35
RNU6-220P-201ENST00000390919 TNXBP22105 4242 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms