RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 CHIC1Q5VXU3 224 aa7.28□□□□□ -1.24
RNU6-220P-201ENST00000390919 AEBP2Q6ZN18 517 aaPredicted RBP6.95□□□□□ -1.3
RNU6-220P-201ENST00000390919 PHF23Q9BUL5 403 aaPredicted RBP6.39□□□□□ -1.39
RNU6-220P-201ENST00000390919 PLPPR3Q6T4P5 718 aa6.16□□□□□ -1.42
RNU6-220P-201ENST00000390919 EHMT2Q96KQ7 1210 aa6.05□□□□□ -1.44
RNU6-220P-201ENST00000390919 SENP3Q9H4L4 574 aaPredicted RBP5.92□□□□□ -1.46
RNU6-220P-201ENST00000390919 KCNA4P22459 653 aa5.82□□□□□ -1.48
RNU6-220P-201ENST00000390919 SLC24A1O60721 1099 aa5.75□□□□□ -1.49
RNU6-220P-201ENST00000390919 CSRNP3Q8WYN3 585 aa5.69□□□□□ -1.5
RNU6-220P-201ENST00000390919 ADRA2BP18089 450 aa5.67□□□□□ -1.5
RNU6-220P-201ENST00000390919 SLC4A1APQ9BWU0 796 aaKnown RBP5.67□□□□□ -1.5
RNU6-220P-201ENST00000390919 AMER1Q5JTC6 1135 aaPredicted RBP5.54□□□□□ -1.52
RNU6-220P-201ENST00000390919 NCBP3Q53F19 620 aaKnown RBP5.51□□□□□ -1.53
RNU6-220P-201ENST00000390919 PPP6R1Q9UPN7 881 aa5.5□□□□□ -1.53
RNU6-220P-201ENST00000390919 RTN4Q9NQC3 1192 aaKnown RBP5.48□□□□□ -1.53
RNU6-220P-201ENST00000390919 PPP4R3CPQ6ZMV5 832 aa5.46□□□□□ -1.54
RNU6-220P-201ENST00000390919 FOXD1Q16676 465 aa5.38□□□□□ -1.55
RNU6-220P-201ENST00000390919 NPM3O75607 178 aaKnown RBP5.35□□□□□ -1.55
RNU6-220P-201ENST00000390919 ZBTB22O15209 634 aa5.32□□□□□ -1.56
RNU6-220P-201ENST00000390919 FOXD4L1Q9NU39 408 aa5.27□□□□□ -1.57
RNU6-220P-201ENST00000390919 PIAS4Q8N2W9 510 aaPredicted RBP5.25□□□□□ -1.57
RNU6-220P-201ENST00000390919 CNKSR2Q8WXI2 1034 aa5.22□□□□□ -1.57
RNU6-220P-201ENST00000390919 FKBP8Q14318 412 aa5.18□□□□□ -1.58
RNU6-220P-201ENST00000390919 SCAF1Q9H7N4 1312 aaKnown RBP5.18□□□□□ -1.58
RNU6-220P-201ENST00000390919 DNAJC5BQ9UF47 199 aa5.08□□□□□ -1.6
RNU6-220P-201ENST00000390919 BCANQ96GW7 911 aa5.07□□□□□ -1.6
RNU6-220P-201ENST00000390919 PLCB2Q00722 1185 aa5.05□□□□□ -1.6
RNU6-220P-201ENST00000390919 HAP1P54257 671 aaPredicted RBP5.04□□□□□ -1.6
RNU6-220P-201ENST00000390919 ATXN8OSP0DMR3 200 aa5.03□□□□□ -1.6
RNU6-220P-201ENST00000390919 RNF216Q9NWF9 866 aaPredicted RBP5□□□□□ -1.61
RNU6-220P-201ENST00000390919 PRKCSHP14314 528 aaPredicted RBP4.99□□□□□ -1.61
RNU6-220P-201ENST00000390919 TAOK2Q9UL54 1235 aa4.99□□□□□ -1.61
RNU6-220P-201ENST00000390919 MYCNP04198 464 aaPredicted RBP4.98□□□□□ -1.61
RNU6-220P-201ENST00000390919 DCAF8L2P0C7V8 631 aa4.98□□□□□ -1.61
RNU6-220P-201ENST00000390919 VSIG10Q8N0Z9 540 aa4.94□□□□□ -1.62
RNU6-220P-201ENST00000390919 TPRNQ4KMQ1 711 aa4.92□□□□□ -1.62
RNU6-220P-201ENST00000390919 FBXO3Q9UK99 471 aa4.91□□□□□ -1.62
RNU6-220P-201ENST00000390919 SLC4A2P04920 1241 aa4.9□□□□□ -1.63
RNU6-220P-201ENST00000390919 MAPK8IP2Q13387 824 aaPredicted RBP4.89□□□□□ -1.63
RNU6-220P-201ENST00000390919 DAXXQ9UER7 740 aaPredicted RBP4.87□□□□□ -1.63
RNU6-220P-201ENST00000390919 MSH5O43196 834 aa4.86□□□□□ -1.63
RNU6-220P-201ENST00000390919 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.85□□□□□ -1.63
RNU6-220P-201ENST00000390919 HOXD11P31277 338 aaPredicted RBP4.83□□□□□ -1.64
RNU6-220P-201ENST00000390919 ERICH6Q7L0X2 663 aa4.82□□□□□ -1.64
RNU6-220P-201ENST00000390919 ARXQ96QS3 562 aa4.82□□□□□ -1.64
RNU6-220P-201ENST00000390919 TULP1O00294 542 aaPredicted RBP4.79□□□□□ -1.64
RNU6-220P-201ENST00000390919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.78□□□□□ -1.64
RNU6-220P-201ENST00000390919 VASPP50552 380 aaPredicted RBP4.78□□□□□ -1.64
RNU6-220P-201ENST00000390919 HNRNPUL2Q1KMD3 747 aaKnown RBP4.78□□□□□ -1.64
RNU6-220P-201ENST00000390919 TIMELESSQ9UNS1 1208 aa4.78□□□□□ -1.64
RNU6-220P-201ENST00000390919 PAXIP1Q6ZW49 1069 aaPredicted RBP4.77□□□□□ -1.65
RNU6-220P-201ENST00000390919 BBXQ8WY36 941 aaPredicted RBP4.77□□□□□ -1.65
RNU6-220P-201ENST00000390919 CFAP44Q96MT7 982 aa4.77□□□□□ -1.65
RNU6-220P-201ENST00000390919 NBR1Q14596 966 aa4.76□□□□□ -1.65
RNU6-220P-201ENST00000390919 SAMD1Q6SPF0 538 aaPredicted RBP4.76□□□□□ -1.65
RNU6-220P-201ENST00000390919 DMRT2Q9Y5R5 561 aa4.76□□□□□ -1.65
RNU6-220P-201ENST00000390919 SPDYE4A6NLX3 237 aa4.75□□□□□ -1.65
RNU6-220P-201ENST00000390919 KDM2AQ9Y2K7 1162 aa4.75□□□□□ -1.65
RNU6-220P-201ENST00000390919 GTF3C3Q9Y5Q9 886 aa4.75□□□□□ -1.65
RNU6-220P-201ENST00000390919 FBLN2P98095 1184 aa4.74□□□□□ -1.65
RNU6-220P-201ENST00000390919 ATF5Q9Y2D1 282 aaPredicted RBP4.73□□□□□ -1.65
RNU6-220P-201ENST00000390919 PKD2Q13563 968 aa4.72□□□□□ -1.65
RNU6-220P-201ENST00000390919 IFNLR1Q8IU57 520 aaPredicted RBP4.72□□□□□ -1.65
RNU6-220P-201ENST00000390919 HOMEZQ8IX15 550 aa4.72□□□□□ -1.65
RNU6-220P-201ENST00000390919 SPRYD3Q8NCJ5 442 aa4.7□□□□□ -1.66
RNU6-220P-201ENST00000390919 ECM2O94769 699 aaPredicted RBP4.69□□□□□ -1.66
RNU6-220P-201ENST00000390919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.68□□□□□ -1.66
RNU6-220P-201ENST00000390919 KLHL34Q8N239 644 aa4.67□□□□□ -1.66
RNU6-220P-201ENST00000390919 C14orf37Q86TY3 774 aa4.66□□□□□ -1.66
RNU6-220P-201ENST00000390919 ZNF219Q9P2Y4 722 aaPredicted RBP4.66□□□□□ -1.66
RNU6-220P-201ENST00000390919 APLP2Q06481 763 aa4.65□□□□□ -1.67
RNU6-220P-201ENST00000390919 PROM2Q8N271 834 aa4.65□□□□□ -1.67
RNU6-220P-201ENST00000390919 TSHZ2Q9NRE2 1034 aa4.65□□□□□ -1.67
RNU6-220P-201ENST00000390919 SPOCK2Q92563 424 aa4.64□□□□□ -1.67
RNU6-220P-201ENST00000390919 DCAF8L1A6NGE4 600 aa4.63□□□□□ -1.67
RNU6-220P-201ENST00000390919 NPM1P06748 294 aaKnown RBP eCLIP4.63□□□□□ -1.67
RNU6-220P-201ENST00000390919 RANGAP1P46060 587 aaPredicted RBP4.63□□□□□ -1.67
RNU6-220P-201ENST00000390919 TMEM132AQ24JP5 1023 aa4.63□□□□□ -1.67
RNU6-220P-201ENST00000390919 CHGAP10645 457 aaKnown RBP4.59□□□□□ -1.67
RNU6-220P-201ENST00000390919 U3KPZ7 1027 aaPredicted RBP4.58□□□□□ -1.68
RNU6-220P-201ENST00000390919 RGL2O15211 777 aa4.57□□□□□ -1.68
RNU6-220P-201ENST00000390919 DNAJC5Q9H3Z4 198 aa4.56□□□□□ -1.68
RNU6-220P-201ENST00000390919 MKRN4PQ13434 485 aaPredicted RBP4.55□□□□□ -1.68
RNU6-220P-201ENST00000390919 PLCD3Q8N3E9 789 aa4.54□□□□□ -1.68
RNU6-220P-201ENST00000390919 STAG3Q9UJ98 1225 aa4.52□□□□□ -1.69
RNU6-220P-201ENST00000390919 CIZ1Q9ULV3 898 aaPredicted RBP4.52□□□□□ -1.69
RNU6-220P-201ENST00000390919 PODXL2Q9NZ53 605 aa4.51□□□□□ -1.69
RNU6-220P-201ENST00000390919 PLEKHG5O94827 1062 aa4.5□□□□□ -1.69
RNU6-220P-201ENST00000390919 HS6ST3Q8IZP7 471 aa4.49□□□□□ -1.69
RNU6-220P-201ENST00000390919 TRIM41Q8WV44 630 aa4.49□□□□□ -1.69
RNU6-220P-201ENST00000390919 ZBTB47Q9UFB7 747 aaPredicted RBP4.48□□□□□ -1.69
RNU6-220P-201ENST00000390919 SUPT5HO00267 1087 aaKnown RBP4.47□□□□□ -1.69
RNU6-220P-201ENST00000390919 P3H3Q8IVL6 736 aa4.47□□□□□ -1.69
RNU6-220P-201ENST00000390919 MIER1Q8N108 512 aa4.47□□□□□ -1.69
RNU6-220P-201ENST00000390919 ZBTB12Q9Y330 459 aaPredicted RBP4.46□□□□□ -1.7
RNU6-220P-201ENST00000390919 TRHP20396 242 aaPredicted RBP4.44□□□□□ -1.7
RNU6-220P-201ENST00000390919 POLA2Q14181 598 aa4.44□□□□□ -1.7
RNU6-220P-201ENST00000390919 RYDENQ9NUL5 291 aaKnown RBP4.43□□□□□ -1.7
RNU6-220P-201ENST00000390919 LMOD2Q6P5Q4 547 aa4.42□□□□□ -1.7
RNU6-220P-201ENST00000390919 NEUROD2Q15784 382 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms