RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 DEFB105AQ8NG35 78 aa1.5□□□□□ -2.17
COL6A5-203ENST00000373157 JMJD1CQ15652 2540 aa1.5□□□□□ -2.17
COL6A5-203ENST00000373157 OTOGLQ3ZCN5 2332 aa1.5□□□□□ -2.17
COL6A5-203ENST00000373157 BAHCC1Q9P281 2608 aa1.5□□□□□ -2.17
COL6A5-203ENST00000373157 COL6A6A6NMZ7 2263 aa1.49□□□□□ -2.17
COL6A5-203ENST00000373157 PIEZO2Q9H5I5 2752 aa1.49□□□□□ -2.17
COL6A5-203ENST00000373157 COL6A3P12111 3177 aa1.49□□□□□ -2.17
COL6A5-203ENST00000373157 APELAP0DMC3 54 aa1.48□□□□□ -2.17
COL6A5-203ENST00000373157 LELP1Q5T871 98 aa1.48□□□□□ -2.17
COL6A5-203ENST00000373157 MGAQ8IWI9 3026 aa1.48□□□□□ -2.17
COL6A5-203ENST00000373157 SPRR1AP35321 89 aa1.47□□□□□ -2.17
COL6A5-203ENST00000373157 KRTAP10-10P60014 251 aa1.47□□□□□ -2.17
COL6A5-203ENST00000373157 Q5VSD8 79 aa1.47□□□□□ -2.17
COL6A5-203ENST00000373157 DEFB109BQ30KR1 87 aa1.47□□□□□ -2.17
COL6A5-203ENST00000373157 MMP24-AS1A0A0U1RRL7 71 aa1.46□□□□□ -2.18
COL6A5-203ENST00000373157 PRLHP81277 87 aa1.46□□□□□ -2.18
COL6A5-203ENST00000373157 DEFB110Q30KQ9 67 aa1.46□□□□□ -2.18
COL6A5-203ENST00000373157 TOMM7Q9P0U1 55 aa1.46□□□□□ -2.18
COL6A5-203ENST00000373157 IGF2RP11717 2491 aa1.46□□□□□ -2.18
COL6A5-203ENST00000373157 DEFB1P60022 68 aa1.45□□□□□ -2.18
COL6A5-203ENST00000373157 KRTAP12-1P59990 96 aa1.44□□□□□ -2.18
COL6A5-203ENST00000373157 KLK9Q2XQG4 91 aa1.44□□□□□ -2.18
COL6A5-203ENST00000373157 TPRP12270 2363 aaKnown RBP1.44□□□□□ -2.18
COL6A5-203ENST00000373157 CHD7Q9P2D1 2997 aa1.43□□□□□ -2.18
COL6A5-203ENST00000373157 SPRR1BP22528 89 aa1.43□□□□□ -2.18
COL6A5-203ENST00000373157 TNRC18O15417 2968 aaPredicted RBP1.42□□□□□ -2.18
COL6A5-203ENST00000373157 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
COL6A5-203ENST00000373157 NOP10Q9NPE3 64 aaKnown RBP1.42□□□□□ -2.18
COL6A5-203ENST00000373157 PTPRZ1P23471 2315 aaPredicted RBP1.42□□□□□ -2.18
COL6A5-203ENST00000373157 SPTBN1Q01082 2364 aaKnown RBP1.42□□□□□ -2.18
COL6A5-203ENST00000373157 CLPSL2Q6UWE3 100 aa1.42□□□□□ -2.18
COL6A5-203ENST00000373157 PKDREJQ9NTG1 2253 aa1.41□□□□□ -2.18
COL6A5-203ENST00000373157 WNK1Q9H4A3 2382 aa1.4□□□□□ -2.19
COL6A5-203ENST00000373157 PCNTO95613 3336 aa1.4□□□□□ -2.19
COL6A5-203ENST00000373157 REV3LO60673 3130 aa1.4□□□□□ -2.19
COL6A5-203ENST00000373157 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
COL6A5-203ENST00000373157 PCNX1Q96RV3 2341 aa1.39□□□□□ -2.19
COL6A5-203ENST00000373157 EP400Q96L91 3159 aa1.39□□□□□ -2.19
COL6A5-203ENST00000373157 S4R3F8 94 aa1.39□□□□□ -2.19
COL6A5-203ENST00000373157 UTRNP46939 3433 aa1.38□□□□□ -2.19
COL6A5-203ENST00000373157 ZNF462Q96JM2 2506 aa1.38□□□□□ -2.19
COL6A5-203ENST00000373157 CD52P31358 61 aa1.38□□□□□ -2.19
COL6A5-203ENST00000373157 DEFB108BQ8NET1 73 aa1.38□□□□□ -2.19
COL6A5-203ENST00000373157 ROS1P08922 2347 aa1.38□□□□□ -2.19
COL6A5-203ENST00000373157 RP1L1Q8IWN7 2480 aaPredicted RBP1.38□□□□□ -2.19
COL6A5-203ENST00000373157 GOLGB1Q14789 3259 aaKnown RBP1.37□□□□□ -2.19
COL6A5-203ENST00000373157 J3QKU1 62 aa1.37□□□□□ -2.19
COL6A5-203ENST00000373157 OTOGQ6ZRI0 2925 aa1.37□□□□□ -2.19
COL6A5-203ENST00000373157 WDR87Q6ZQQ6 2873 aa1.37□□□□□ -2.19
COL6A5-203ENST00000373157 ACACAQ13085 2346 aa1.36□□□□□ -2.19
COL6A5-203ENST00000373157 SPINK1P00995 79 aa1.36□□□□□ -2.19
COL6A5-203ENST00000373157 KRTAP13-1Q8IUC0 172 aa1.36□□□□□ -2.19
COL6A5-203ENST00000373157 FBN1P35555 2871 aaKnown RBP1.35□□□□□ -2.19
COL6A5-203ENST00000373157 CENPFP49454 3210 aa1.35□□□□□ -2.19
COL6A5-203ENST00000373157 TRANK1O15050 2925 aa1.35□□□□□ -2.19
COL6A5-203ENST00000373157 C2CD3Q4AC94 2353 aa1.35□□□□□ -2.19
COL6A5-203ENST00000373157 RHPN1-AS1Q9BWJ2 59 aa1.34□□□□□ -2.19
COL6A5-203ENST00000373157 ASH1LQ9NR48 2969 aaKnown RBP1.34□□□□□ -2.19
COL6A5-203ENST00000373157 SPTBN2O15020 2390 aa1.33□□□□□ -2.2
COL6A5-203ENST00000373157 SPTA1P02549 2419 aa1.33□□□□□ -2.2
COL6A5-203ENST00000373157 USP24Q9UPU5 2620 aa1.33□□□□□ -2.2
COL6A5-203ENST00000373157 CFAP54Q96N23 3096 aa1.33□□□□□ -2.2
COL6A5-203ENST00000373157 SZT2Q5T011 3432 aa1.33□□□□□ -2.2
COL6A5-203ENST00000373157 GVINP1Q7Z2Y8 2422 aa1.33□□□□□ -2.2
COL6A5-203ENST00000373157 DSPP15924 2871 aaKnown RBP1.32□□□□□ -2.2
COL6A5-203ENST00000373157 A0A0D9SG42 100 aa1.32□□□□□ -2.2
COL6A5-203ENST00000373157 HTN1P15515 57 aa1.32□□□□□ -2.2
COL6A5-203ENST00000373157 SETXQ7Z333 2677 aaKnown RBP1.32□□□□□ -2.2
COL6A5-203ENST00000373157 TENM2Q9NT68 2774 aa1.32□□□□□ -2.2
COL6A5-203ENST00000373157 PRUNE2Q8WUY3 3088 aa1.32□□□□□ -2.2
COL6A5-203ENST00000373157 KRTAP12-4P60329 112 aa1.31□□□□□ -2.2
COL6A5-203ENST00000373157 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
COL6A5-203ENST00000373157 SPTBN5Q9NRC6 3674 aaKnown RBP1.31□□□□□ -2.2
COL6A5-203ENST00000373157 NBEAQ8NFP9 2946 aa1.31□□□□□ -2.2
COL6A5-203ENST00000373157 CHD6Q8TD26 2715 aa1.31□□□□□ -2.2
COL6A5-203ENST00000373157 RANBP2P49792 3224 aaKnown RBP1.31□□□□□ -2.2
COL6A5-203ENST00000373157 AKAP6Q13023 2319 aa1.3□□□□□ -2.2
COL6A5-203ENST00000373157 SPTBN4Q9H254 2564 aa1.3□□□□□ -2.2
COL6A5-203ENST00000373157 APC2O95996 2303 aa1.3□□□□□ -2.2
COL6A5-203ENST00000373157 CFAP47Q6ZTR5 3102 aa1.3□□□□□ -2.2
COL6A5-203ENST00000373157 USP34Q70CQ2 3546 aa1.3□□□□□ -2.2
COL6A5-203ENST00000373157 CHD8Q9HCK8 2581 aa1.29□□□□□ -2.2
COL6A5-203ENST00000373157 Q9Y3F1 56 aa1.29□□□□□ -2.2
COL6A5-203ENST00000373157 VPS13AQ96RL7 3174 aa1.29□□□□□ -2.2
COL6A5-203ENST00000373157 UNC80Q8N2C7 3258 aa1.29□□□□□ -2.2
COL6A5-203ENST00000373157 CEP250Q9BV73 2442 aa1.29□□□□□ -2.2
COL6A5-203ENST00000373157 CSPG4Q6UVK1 2322 aa1.29□□□□□ -2.2
COL6A5-203ENST00000373157 ABCA2Q9BZC7 2435 aa1.29□□□□□ -2.2
COL6A5-203ENST00000373157 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
COL6A5-203ENST00000373157 EYSQ5T1H1 3165 aa1.28□□□□□ -2.2
COL6A5-203ENST00000373157 CELSR2Q9HCU4 2923 aa1.28□□□□□ -2.2
COL6A5-203ENST00000373157 DEFB136Q30KP8 78 aa1.28□□□□□ -2.2
COL6A5-203ENST00000373157 MAST4O15021 2626 aa1.27□□□□□ -2.21
COL6A5-203ENST00000373157 MKI67P46013 3256 aaKnown RBP1.27□□□□□ -2.21
COL6A5-203ENST00000373157 UBR5O95071 2799 aaPredicted RBP1.27□□□□□ -2.21
COL6A5-203ENST00000373157 FRYLO94915 3013 aa1.27□□□□□ -2.21
COL6A5-203ENST00000373157 VCANP13611 3396 aa1.27□□□□□ -2.21
COL6A5-203ENST00000373157 NBPF19A0A087WUL8 3843 aa1.27□□□□□ -2.21
COL6A5-203ENST00000373157 SPEGQ15772 3267 aa1.26□□□□□ -2.21
COL6A5-203ENST00000373157 DMDP11532 3685 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms