RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 AEBP2Q6ZN18 517 aaPredicted RBP16.61■□□□□ 0.25
COL6A5-203ENST00000373157 CHIC1Q5VXU3 224 aa15.64■□□□□ 0.1
COL6A5-203ENST00000373157 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
COL6A5-203ENST00000373157 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
COL6A5-203ENST00000373157 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
COL6A5-203ENST00000373157 FOXD1Q16676 465 aa13.42□□□□□ -0.26
COL6A5-203ENST00000373157 MSH5O43196 834 aa12.92□□□□□ -0.34
COL6A5-203ENST00000373157 PIAS4Q8N2W9 510 aaPredicted RBP12.38□□□□□ -0.43
COL6A5-203ENST00000373157 PPP6R1Q9UPN7 881 aa11.97□□□□□ -0.49
COL6A5-203ENST00000373157 ADRA2BP18089 450 aa11.9□□□□□ -0.5
COL6A5-203ENST00000373157 PLPPR3Q6T4P5 718 aa11.89□□□□□ -0.51
COL6A5-203ENST00000373157 CACNB1Q02641 598 aaPredicted RBP11.43□□□□□ -0.58
COL6A5-203ENST00000373157 DMRT2Q9Y5R5 561 aa11.31□□□□□ -0.6
COL6A5-203ENST00000373157 MAPK8IP2Q13387 824 aaPredicted RBP11.12□□□□□ -0.63
COL6A5-203ENST00000373157 SCAF1Q9H7N4 1312 aaKnown RBP11.07□□□□□ -0.64
COL6A5-203ENST00000373157 RNF39Q9H2S5 420 aa10.91□□□□□ -0.66
COL6A5-203ENST00000373157 C1QBPQ07021 282 aaKnown RBP10.77□□□□□ -0.68
COL6A5-203ENST00000373157 DCAF8L1A6NGE4 600 aa10.77□□□□□ -0.69
COL6A5-203ENST00000373157 HOXD11P31277 338 aaPredicted RBP10.65□□□□□ -0.71
COL6A5-203ENST00000373157 POTEHQ6S545 545 aa10.57□□□□□ -0.72
COL6A5-203ENST00000373157 DNAJC5BQ9UF47 199 aa10.53□□□□□ -0.72
COL6A5-203ENST00000373157 RNF216Q9NWF9 866 aaPredicted RBP10.39□□□□□ -0.75
COL6A5-203ENST00000373157 CNKSR2Q8WXI2 1034 aa10.3□□□□□ -0.76
COL6A5-203ENST00000373157 PPP4R3CPQ6ZMV5 832 aa10.29□□□□□ -0.76
COL6A5-203ENST00000373157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.79
COL6A5-203ENST00000373157 DSG3P32926 999 aa9.97□□□□□ -0.81
COL6A5-203ENST00000373157 CAPN15O75808 1086 aa9.85□□□□□ -0.83
COL6A5-203ENST00000373157 SPINK5Q9NQ38 1064 aaPredicted RBP9.79□□□□□ -0.84
COL6A5-203ENST00000373157 NCBP3Q53F19 620 aaKnown RBP9.78□□□□□ -0.84
COL6A5-203ENST00000373157 U3KPZ7 1027 aaPredicted RBP9.78□□□□□ -0.84
COL6A5-203ENST00000373157 RBM42Q9BTD8 480 aaKnown RBP9.63□□□□□ -0.87
COL6A5-203ENST00000373157 SP7Q8TDD2 431 aaPredicted RBP9.62□□□□□ -0.87
COL6A5-203ENST00000373157 APLP2Q06481 763 aa9.61□□□□□ -0.87
COL6A5-203ENST00000373157 CHRDL2Q6WN34 429 aa9.6□□□□□ -0.87
COL6A5-203ENST00000373157 ZNF219Q9P2Y4 722 aaPredicted RBP9.57□□□□□ -0.88
COL6A5-203ENST00000373157 NPM3O75607 178 aaKnown RBP9.52□□□□□ -0.88
COL6A5-203ENST00000373157 TRHP20396 242 aaPredicted RBP9.51□□□□□ -0.89
COL6A5-203ENST00000373157 ABCB7O75027 752 aa9.5□□□□□ -0.89
COL6A5-203ENST00000373157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.4□□□□□ -0.91
COL6A5-203ENST00000373157 HNRNPUL2Q1KMD3 747 aaKnown RBP9.4□□□□□ -0.91
COL6A5-203ENST00000373157 SAMD1Q6SPF0 538 aaPredicted RBP9.28□□□□□ -0.92
COL6A5-203ENST00000373157 SLC4A2P04920 1241 aa9.26□□□□□ -0.93
COL6A5-203ENST00000373157 AKT1S1Q96B36 256 aa9.24□□□□□ -0.93
COL6A5-203ENST00000373157 HAX1O00165 279 aa9.22□□□□□ -0.93
COL6A5-203ENST00000373157 PIP4P2Q8N4L2 257 aa9.21□□□□□ -0.94
COL6A5-203ENST00000373157 POLA2Q14181 598 aa9.12□□□□□ -0.95
COL6A5-203ENST00000373157 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
COL6A5-203ENST00000373157 REM2Q8IYK8 340 aaPredicted RBP9.09□□□□□ -0.95
COL6A5-203ENST00000373157 ZBTB12Q9Y330 459 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-203ENST00000373157 LHX8Q68G74 356 aa9.01□□□□□ -0.97
COL6A5-203ENST00000373157 EVX2Q03828 476 aa8.99□□□□□ -0.97
COL6A5-203ENST00000373157 PITPNM1O00562 1244 aa8.98□□□□□ -0.97
COL6A5-203ENST00000373157 PLSCR2Q9NRY7 297 aa8.93□□□□□ -0.98
COL6A5-203ENST00000373157 MYCNP04198 464 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-203ENST00000373157 C19orf67A6NJJ6 358 aa8.83□□□□□ -1
COL6A5-203ENST00000373157 GABBR2O75899 941 aa8.83□□□□□ -1
COL6A5-203ENST00000373157 OSCARQ8IYS5 282 aa8.83□□□□□ -1
COL6A5-203ENST00000373157 KCNA4P22459 653 aa8.81□□□□□ -1
COL6A5-203ENST00000373157 PRKAR2AP13861 404 aaKnown RBP8.75□□□□□ -1.01
COL6A5-203ENST00000373157 SPDYE1Q8NFV5 336 aaPredicted RBP8.65□□□□□ -1.02
COL6A5-203ENST00000373157 SPDYE2BA6NHP3 402 aa8.64□□□□□ -1.03
COL6A5-203ENST00000373157 SPDYE6P0CI01 402 aa8.64□□□□□ -1.03
COL6A5-203ENST00000373157 SPDYE2Q495Y8 402 aa8.64□□□□□ -1.03
COL6A5-203ENST00000373157 CLCN6P51797 869 aa8.63□□□□□ -1.03
COL6A5-203ENST00000373157 ATF5Q9Y2D1 282 aaPredicted RBP8.61□□□□□ -1.03
COL6A5-203ENST00000373157 POTEIP0CG38 1075 aa8.6□□□□□ -1.03
COL6A5-203ENST00000373157 EHMT2Q96KQ7 1210 aa8.59□□□□□ -1.03
COL6A5-203ENST00000373157 CLEC11AQ9Y240 323 aa8.57□□□□□ -1.04
COL6A5-203ENST00000373157 PCDH10Q9P2E7 1040 aa8.55□□□□□ -1.04
COL6A5-203ENST00000373157 POTEMA6NI47 508 aa8.48□□□□□ -1.05
COL6A5-203ENST00000373157 DCBLD2Q96PD2 775 aa8.47□□□□□ -1.05
COL6A5-203ENST00000373157 FBLN2P98095 1184 aa8.46□□□□□ -1.05
COL6A5-203ENST00000373157 CHADLQ6NUI6 762 aa8.44□□□□□ -1.06
COL6A5-203ENST00000373157 POTEGQ6S5H5 508 aa8.44□□□□□ -1.06
COL6A5-203ENST00000373157 SLC4A1APQ9BWU0 796 aaKnown RBP8.44□□□□□ -1.06
COL6A5-203ENST00000373157 CD44P16070 742 aaKnown RBP8.43□□□□□ -1.06
COL6A5-203ENST00000373157 SSUH2Q9Y2M2 353 aa8.43□□□□□ -1.06
COL6A5-203ENST00000373157 OTUD5Q96G74 571 aa8.42□□□□□ -1.06
COL6A5-203ENST00000373157 FOXD4L1Q9NU39 408 aa8.41□□□□□ -1.06
COL6A5-203ENST00000373157 PRR29P0C7W0 189 aa8.39□□□□□ -1.07
COL6A5-203ENST00000373157 ZNF692Q9BU19 519 aaPredicted RBP8.37□□□□□ -1.07
COL6A5-203ENST00000373157 ZNF579Q8NAF0 562 aaKnown RBP8.33□□□□□ -1.08
COL6A5-203ENST00000373157 CSRNP3Q8WYN3 585 aa8.33□□□□□ -1.08
COL6A5-203ENST00000373157 FARP1Q9Y4F1 1045 aaPredicted RBP8.33□□□□□ -1.08
COL6A5-203ENST00000373157 ATXN8OSP0DMR3 200 aa8.31□□□□□ -1.08
COL6A5-203ENST00000373157 POTEB2H3BUK9 544 aa8.27□□□□□ -1.09
COL6A5-203ENST00000373157 MKRN4PQ13434 485 aaPredicted RBP8.21□□□□□ -1.1
COL6A5-203ENST00000373157 ZRANB1Q9UGI0 708 aa8.21□□□□□ -1.1
COL6A5-203ENST00000373157 MAMSTRQ6ZN01 415 aa8.2□□□□□ -1.1
COL6A5-203ENST00000373157 PABPN1Q86U42 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
COL6A5-203ENST00000373157 GALR2O43603 387 aaPredicted RBP8.17□□□□□ -1.1
COL6A5-203ENST00000373157 ZBTB22O15209 634 aa8.12□□□□□ -1.11
COL6A5-203ENST00000373157 LCE2DQ5TA82 110 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-203ENST00000373157 C7P10643 843 aa8.1□□□□□ -1.11
COL6A5-203ENST00000373157 FAM163AQ96GL9 167 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-203ENST00000373157 SLC39A7Q92504 469 aa8.09□□□□□ -1.11
COL6A5-203ENST00000373157 PELP1Q8IZL8 1130 aaKnown RBP8.08□□□□□ -1.12
COL6A5-203ENST00000373157 PAK3O75914 559 aaPredicted RBP8.07□□□□□ -1.12
COL6A5-203ENST00000373157 METRNQ9UJH8 293 aa8.07□□□□□ -1.12
COL6A5-203ENST00000373157 SCUBE2Q9NQ36 999 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms