RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Rchy1Q9CR50 261 aa11.6□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Ccl6P27784 116 aa11.6□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Pom121l2Q5SW25 972 aa11.6□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Ighv1-26A0A075B5V0 117 aa11.6□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 BC035044E0CXF8 138 aa11.6□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 RtbdnQ8QZY4 247 aa11.6□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Klf14Q19A41 325 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Usmg5Q78IK2 58 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Gm33815A0A087WNV3 176 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Igkv14-111A0A140T8P9 117 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Spink1P09036 80 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Rpl32-psP17932 135 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Csrp2P97314 193 aaKnown RBP11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Ttc9cQ810A3 171 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Q8C708 225 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Trav9-1A0A075B601 112 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Inafm1E9PV59 130 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Xcl1P47993 114 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Tpsab1Q02844 273 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Q8BG31 207 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Pygo1Q9D0P5 417 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Gm16381A0A1Y7VKT9 73 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Rpl36aP83882 106 aaKnown RBP11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 Lmo1Q924W9 156 aa11.59□□□□□ -0.55
Pcdha8-201ENSMUST00000194038 P01724 129 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 P01727 129 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 IappP12968 93 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Gm7489Q3UT34 171 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Gm10188Q3V432 135 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ighv14-1A0A075B5R4 117 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Brd3osA0A1B0GRB6 84 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ly86O88188 162 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 F930015N05RikQ8C3A3 210 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Trav6-4A0A075B6B4 115 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Lynx1P0DP60 116 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Msrb3Q8BU85 253 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Igkv4-70A0A0B4J1I5 116 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Samd13D3YUG0 102 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ccl12Q62401 104 aa11.58□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ighv1-81A0A075B5Y4 117 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Trav14n-2A0A0G2JDF5 121 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 P04946 108 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Mrpl55Q9CZ83 127 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Igkv4-90A0A075B5L3 117 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 P03980 138 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ighv1-62-2A0A0A6YXZ4 119 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Tex26Q0VB26 296 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Cmc4Q61908 68 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Igkv4-63A0A0G2JFU6 117 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Igkv19-93A0A0G2JFZ3 115 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 A930003A15RikQ3U552 87 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 SpinklQ8CEK3 90 aa11.57□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 3110018I06RikQ9CXS0 120 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ankrd39Q9D2X0 183 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Zfp36P22893 319 aaKnown RBP11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Spata46Q4FZF2 204 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Gm5105Q8C6Y9 112 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ifi27l2aQ8R412 90 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 OtosQ8R448 89 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Wt1P22561 449 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Pradc1Q9D9N8 188 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Gm5294J3QP53 216 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 PkigO70139 76 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Wnt2P21552 360 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Zfp648D3Z0W3 525 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Wisp3D3Z5L9 354 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 PpbpQ9EQI5 113 aa11.56□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Mcm3apQ9WUU9 1971 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Mrps21P58059 87 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Slc25a48Q8BW66 306 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 1700001C19RikQ8K168 210 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Pgpep1lQ9CWB5 130 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 HampQ9EQ21 83 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Svs5P30933 122 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Zic4Q61467 341 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Tcf24V9GWT9 166 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Trav12-3A0A075B648 115 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Tomm7Q9D173 55 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Trav14-3A0A075B607 120 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Lrcol1Q3URS3 161 aa11.55□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Gm28778A0A087WSK7 233 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Lrrk1Q3UHC2 2014 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 CntfrO88507 372 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Pglyrp4Q0VB07 374 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Rspo3Q2TJ95 277 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Clec4b2Q67DU8 208 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ighv1-31A0A0A6YWK5 117 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ighv1-49A0A0A6YWX2 117 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Defb30Q30KN4 75 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ang6Q5GAN0 147 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Tomm6Q9CQN3 74 aa11.54□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Igkv6-23A0A140T8N5 115 aa11.53□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Slc25a29Q8BL03 306 aa11.53□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Tmem86bQ497J1 226 aa11.53□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 C330021F23RikQ8C7T0 141 aa11.53□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Gm7102J3QQ10 178 aa11.53□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 A730015C16RikQ8C992 119 aa11.53□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 PmvkQ9D1G2 192 aa11.53□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Trav9d-1A0A075B699 112 aa11.52□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Igkv12-89A0A0G2JGW8 112 aa11.52□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms