RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Igkv4-74A0A0B4J1I3 119 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Tmem92B7ZWI3 162 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Ypel2Q65Z95 119 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Tax1bp3Q9DBG9 124 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Ypel1Q9ESC7 118 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Smim20D3Z7Q2 69 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Q9D8L0 127 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Igkv12-38A0A0G2JEI7 115 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Faap20Q3UN58 186 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Sh2d6Q9D413 297 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 Klk1b27Q9JM71 263 aa15.26■□□□□ 0.03
Trim71-201ENSMUST00000111816 2210407C18RikQ6YI28 220 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 Defb8Q91V82 60 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 SptssbQ925E8 76 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 Igfbpl1Q80W15 270 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 Gli3Q61602 1583 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 Card19Q9D1I2 183 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 Igkv13-84A0A140T8N3 115 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 Rnf166Q3U9F6 237 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 2200002J24RikQ9D807 110 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 Gm6871L7N248 545 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 Scrt1Q99M85 348 aa15.25■□□□□ 0.03
Trim71-201ENSMUST00000111816 Shisal2aA2A9G7 189 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Spata25Q9DA57 226 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 P01635 115 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Gm11232Q5SPI8 295 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Lsm4Q9QXA5 137 aaKnown RBP15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 E130218I03RikA0A0U1RNU5 63 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 B1ARW8 110 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 NmbQ9CR53 121 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Flg2Q2VIS4 2362 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Dennd4cA6H8H2 1906 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Mustn1Q99JI1 82 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Tex26Q0VB26 296 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Gm10447Q3UQ92 135 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Cd200r5Q8BTP3 270 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Hrct1Q9D6B9 109 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 Gm28539A0A087WSL9 92 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 GlrxQ9QUH0 107 aa15.24■□□□□ 0.03
Trim71-201ENSMUST00000111816 CtsgP28293 261 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 Igkv4-69A0A0B4J1I6 116 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 Igkv6-23A0A140T8N5 115 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 Mrpl32Q9DCI9 187 aaKnown RBP15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 Ccl25O35903 144 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 Ly6fP35460 134 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 NdpP48744 131 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 PigyP0C1P0 71 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 3100002H09RikQ9CXW6 140 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 Ankrd39Q9D2X0 183 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 Rnf5O35445 180 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 Pde6hP61249 83 aa15.23■□□□□ 0.03
Trim71-201ENSMUST00000111816 Thap8E9Q695 213 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 P01637 128 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 Igkv10-96A0A140T8M1 115 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 Nav2E9Q842 2432 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 Itgb4A2A863 1818 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 Trav6d-3A0A075B6B3 112 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 Gm10799F7C7U2 104 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 Trav6-3Q5R1E6 112 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 Foxi1Q922I5 372 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 Reg3dQ9QUS9 175 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 Tmem30bQ8BHG3 353 aa15.22■□□□□ 0.03
Trim71-201ENSMUST00000111816 Mrps11Q9DCA2 191 aaKnown RBP15.21■□□□□ 0.03
Trim71-201ENSMUST00000111816 Igkv4-79A0A075B5L8 119 aa15.21■□□□□ 0.03
Trim71-201ENSMUST00000111816 Trav14n-2A0A0G2JDF5 121 aa15.21■□□□□ 0.03
Trim71-201ENSMUST00000111816 Zfp707F6QUN2 391 aa15.21■□□□□ 0.03
Trim71-201ENSMUST00000111816 Ighv1-20A0A0A6YX66 117 aa15.21■□□□□ 0.02
Trim71-201ENSMUST00000111816 Rnf125Q9D9R0 233 aa15.21■□□□□ 0.02
Trim71-201ENSMUST00000111816 BikO70337 150 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 H1fxQ80ZM5 188 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Mrpl53Q9D1H8 118 aaKnown RBP15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Siglec15A7E1W8 342 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Gm10803Q3TZS6 135 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Zdhhc16Q9ESG8 361 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Klf2Q60843 354 aaKnown RBP15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Trbv31A0A075B5J5 111 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Igkv6-13A0A0G2JGY3 119 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Spsb3Q571F5 354 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Znf524Q9D0B1 321 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 2410004P03RikA0A087WQY2 205 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Mapk1ip1Q9D7G9 263 aa15.2■□□□□ 0.02
Trim71-201ENSMUST00000111816 Igkv4-78A0A0A6YYE5 119 aa15.19■□□□□ 0.02
Trim71-201ENSMUST00000111816 Igkv6-20A0A140T8P2 115 aa15.19■□□□□ 0.02
Trim71-201ENSMUST00000111816 Saa4P31532 130 aa15.19■□□□□ 0.02
Trim71-201ENSMUST00000111816 5530401A14RikQ9D3H9 131 aa15.19■□□□□ 0.02
Trim71-201ENSMUST00000111816 Chchd2Q9D1L0 153 aa15.19■□□□□ 0.02
Trim71-201ENSMUST00000111816 Dkk1O54908 272 aa15.19■□□□□ 0.02
Trim71-201ENSMUST00000111816 Tmem171Q4KL18 322 aa15.19■□□□□ 0.02
Trim71-201ENSMUST00000111816 Fam216aQ9DB54 251 aa15.19■□□□□ 0.02
Trim71-201ENSMUST00000111816 3110018I06RikQ9CXS0 120 aa15.19■□□□□ 0.02
Trim71-201ENSMUST00000111816 Cxcl14Q9WUQ5 99 aa15.19■□□□□ 0.02
Trim71-201ENSMUST00000111816 Ighv14-1A0A075B5R4 117 aa15.18■□□□□ 0.02
Trim71-201ENSMUST00000111816 Igkv14-130A0A0G2JF45 117 aa15.18■□□□□ 0.02
Trim71-201ENSMUST00000111816 Sec61gP60060 68 aa15.18■□□□□ 0.02
Trim71-201ENSMUST00000111816 Tnfrsf23Q9ER63 176 aa15.18■□□□□ 0.02
Trim71-201ENSMUST00000111816 Gm21789J3QMZ1 123 aa15.18■□□□□ 0.02
Trim71-201ENSMUST00000111816 Gm21870J3QPN2 123 aa15.18■□□□□ 0.02
Trim71-201ENSMUST00000111816 Gm21883J3QPV3 123 aa15.18■□□□□ 0.02
Trim71-201ENSMUST00000111816 Usmg5Q78IK2 58 aa15.18■□□□□ 0.02
Trim71-201ENSMUST00000111816 Slc25a48Q8BW66 306 aa15.18■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms