RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Tmem101Q91VP7 257 aa7.71□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Srxn1Q9D975 136 aa7.71□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Olfr19Q9JHB2 309 aa7.71□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Syngr4Q9Z1L2 233 aa7.71□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Pcnx2Q5DU28 2122 aa7.71□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 3110082J24RikF6Z6Z2 108 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Gm5294J3QP53 216 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 OtorQ9JIE3 128 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Rs1Q9Z1L4 224 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Ighv14-2A0A075B5R7 117 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Trav21-dv12A0A075B6C4 109 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 2310009B15RikA0A0A6YWI4 143 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 P04940 107 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 P04942 107 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Prb1Q91X93 504 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Foxi1Q922I5 372 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Fscn3Q9QXW4 498 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Trav14-2A0A075B694 121 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 P01792 123 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Sub1P11031 127 aaKnown RBP7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 ElaneQ3UP87 265 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Zfp874aQ8BX23 447 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Gm10295Q8CCF3 114 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Q9DAQ5 155 aa7.7□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Trav13n-4A0A0G2JG01 110 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 MgpP19788 104 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Saa4P31532 130 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 ClcP97400 68 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 8030423J24RikQ9CX45 142 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Slc25a39Q9D8K8 359 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Ccl28Q9JIL2 130 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Gm20708H3BKF4 155 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Onecut1O08755 465 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Csn3P06796 181 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 P18529 117 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 SbsponQ3UPR9 264 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Foxc1Q61572 553 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 PdpnQ62011 172 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 QrfpQ8CE23 124 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Lyzl1Q9CPX3 148 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Chchd5Q9CQP3 110 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Gemin7Q9CWY4 129 aa7.69□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Igkv13-85A0A075B666 115 aa7.68□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Khdc1cQ4KL78 166 aa7.68□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Vstm2lQ6PDS0 220 aa7.68□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 PkdrejQ9Z0T6 2126 aa7.68□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Zfand5O88878 213 aa7.68□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Cst7O89098 144 aa7.68□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Cdkn1aP39689 159 aa7.68□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Tmeff1Q6PFE7 372 aa7.68□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 F11rO88792 300 aa7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Tmem95P0DJF3 176 aa7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 P18527 97 aa7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Tcl1b4P56844 120 aa7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Shisa2Q8QZV2 295 aa7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Olfr1454Q8VFW2 307 aa7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Srsf9Q9D0B0 222 aaKnown RBP7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 TncQ80YX1 2110 aa7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 MyadmO35682 320 aaKnown RBP7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 P18525 117 aa7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Crb3Q8QZT4 113 aa7.67□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Igkv14-130A0A0G2JF45 117 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Prss58Q8BW11 241 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Tmem92B7ZWI3 162 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Rtl10D3YWW5 146 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 P01746 140 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Neurog3P70661 214 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Mllt11P97783 90 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Tmem86bQ497J1 226 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Defb19Q8K3I8 83 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 RabepkQ8VCH5 380 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Ociad1Q9CRD0 247 aaKnown RBP7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Ccl8Q9Z121 97 aa7.66□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Samd13D3YUG0 102 aa7.65□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Esp3J3QN49 87 aa7.65□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Loxl2P58022 776 aa7.65□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Timm8a2Q4FZG7 97 aa7.65□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Ptrh2Q8R2Y8 181 aaKnown RBP7.65□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Tnfsf12O54907 249 aa7.65□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Mamld1P0C6A2 803 aa7.65□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Ccl11P48298 97 aa7.65□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 H2al1aQ5M8Q2 105 aa7.65□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Trav8d-2Q5R1B6 112 aa7.65□□□□□ -1.18
Hmgb1-201ENSMUST00000085546 Ighv1-20A0A0A6YX66 117 aa7.65□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm44965A0A0N4SVR3 59 aa7.65□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Iqcf6G3UWF2 157 aa7.65□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 P01837 106 aa7.65□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Saa3P04918 122 aa7.65□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Ntf4Q80VU4 209 aa7.65□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm9961Q8BNV2 113 aa7.65□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 3100002H09RikQ9CXW6 140 aa7.65□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Pcsk5Q04592 1877 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Cpsf4lE9Q2N0 280 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 P01794 123 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Klk1b21Q61759 261 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm9573F7C950 1606 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm12845A0A0N4SUM5 588 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Trbv17A0A140T8P8 114 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Esp38A8R0X1 80 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Vmn1r60G3UY47 300 aa7.64□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms