RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Fxyd1Q9Z239 92 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Dopey2Q3UHQ6 2295 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm29666A0A087WQ99 126 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Tmem92B7ZWI3 162 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Id3P41133 119 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 H1fxQ80ZM5 188 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Olfr1195Q8VG21 308 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Pip4p2Q9CZX7 257 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Lypd8Q9D7S0 255 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Crlf1Q9JM58 425 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Cd5lQ9QWK4 352 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Zswim8Q3UHH1 1832 aaKnown RBP7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Igkv4-70A0A0B4J1I5 116 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm2564F6Z9S8 108 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ccl19O70460 108 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 SbpP15501 199 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 NdpP48744 131 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Rpl32P62911 135 aaKnown RBP7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm21370Q3T9V6 190 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Rhno1Q8K3A4 235 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Tomm7Q9D173 55 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Igkv19-93A0A0G2JFZ3 115 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 A0A1Y7VLU2 103 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Wipf3P0C7L0 485 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Znf664Q4VA44 261 aa7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ndufa4Q62425 82 aaKnown RBP7.45□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Nrxn2E9Q7X7 1710 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Shank3Q4ACU6 1730 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Cacna1eQ61290 2272 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Igkv3-2A0A075B5P0 119 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Lamtor3O88653 124 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Pygo2Q80V76 405 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Cd300eQ8K249 196 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ube2wQ8VDW4 151 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Pth2Q91W27 100 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ifitm1Q9D103 106 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Sptan1P16546 2472 aaKnown RBP7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ighv1-80A0A075B5Y3 117 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Sap30O88574 220 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Pate4Q09098 99 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Nr2c2apQ3TV70 140 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Fer1l6E0CZ42 1862 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm28269A0A087WSG3 125 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 4931428L18RikQ9D4S9 127 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Scn5aQ9JJV9 2019 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ighv1-39A0A075B5V5 117 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ube2e1P52482 193 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Zcwpw2Q08EN7 125 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 PcolceQ61398 468 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 RetnlgQ8K426 117 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Stpg1Q9D2F5 341 aa7.44□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm10020E9QAZ2 204 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 PigyP0C1P0 71 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Rpl15Q9CZM2 204 aaKnown RBP7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Loxhd1C8YR32 2068 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Med13Q5SWW4 2171 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Igkv3-1A0A075B5P1 119 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 6430628N08RikA0A0U1RQ45 177 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Fam240bJ3QMB3 78 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Foxh1O88621 401 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Vmo1Q5SXG7 201 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Fam110aQ8R184 296 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Mpv17l2Q8VIK2 200 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Cpsf4lE9Q2N0 280 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Trav7-2Q5R1I3 112 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Polr3kQ9CQZ7 108 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Cnot1Q6ZQ08 2375 aaKnown RBP7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Dicer1Q8R418 1916 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Zfp11P10751 647 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Fgf4P11403 202 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 9130213A22RikQ3V3T2 120 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 RtbdnQ8QZY4 247 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Nup214Q80U93 2085 aa7.43□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Fer1l5P0DM40 2038 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Lrrk1Q3UHC2 2014 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm4064A0A087WR82 380 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 B1ARW8 110 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm10352B2RWR6 380 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Igkv1-99F6XWB2 120 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm21693J3QK27 380 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Rbmy1a1O35698 380 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm10881P01642 115 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Foxf1Q61080 378 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Cdcp2Q8BQH6 427 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Foxi1Q922I5 372 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Spaca3Q9D9X8 221 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gbf1Q6DFZ1 1861 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ighv5-6A0A075B5Q0 117 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ighv1-9A0A0A6YW37 117 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 CckP09240 115 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Plscr4P58196 326 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Tcf15Q60756 195 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm4763Q8CFJ5 196 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Tm4sf20Q9CQY8 226 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ighv5-9-1A0A0A6YVS4 126 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Eid2bE9Q2Y0 151 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ear14F6YUX7 155 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Erdr1J3QMM0 206 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm5294J3QP53 216 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 MsmbO08540 113 aa7.42□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms